Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->CCA1(2)                                    --------->ARR14(1)                                   --------->ARR14(2)                                   --------->ARR11(1)                                  >>>>>>>>>ARR1                                   <---------ARR14(2)                                  >>>>>>>>>ARR2                               ---------->DOF2                                       <---------TOE1(3)                            --------->At4g35610<----------DOF2  <---------ANAC58     <---------TOE2(3) ---ZmHOX2a(1)        ---------->DOF2      <----------DOF2      <---------ANAC58     <---------YAB1 -->DOF2            ------>ZmHOX2a(2)<-------TEIL           <----------DOF2 <-----------GT1   gattgaagaacacagaagttgatccaaagcatctaaagatacgagctttcttttgtttgactcttttcttggcttcatttactatttaagattgtagtat  1373400                                                                                 --------->ANAC55(2)                                             <---------YAB1               <---------DOF5.7(2)          <---------TOE1(3)     <---------At4g35610                       ---------->DOF2          <---------TOE2(3)     --------->At4g35610                --------->TOE2(3)    --------->AHL20(2)   <---------ICU4  <----------DOF2           --------->TOE2(2)    <---------AHL20(2)--------->YAB1     <---------DAG2            <---------MYB59   ttgtatttttttaaggttatcccataatcagttcatctgaatactttatttttgaaaaatagttcataacctaagttaaagtcacatgtttgctaagtat  1373500                                                  ----------->GT1             <---------ZAT14                --------->ANAC58                  --------->YAB1              <---------At4g35610                --------->ANAC58   --------->MYB52(1)                         --------->At4g35610     <-------GAMYB        --------->MYB46(3) <-------TEIL                     --------->ZAT14       <    <---------ANAC46    --------->MYB52(1) --------->TOE1(2)      --------->WRKY18(1)            ----   atcatttcgttgaaagaaacccaatccaacggctacaaaacagaacgtacaatagtgaatagttgatggtcaaacttgagagcagtctaaattcaaatcc  1373600                                                         --------->YAB1                                                   --------->ANAC58                                                   --------->ANAC58                                                   --------->ANAC46                                                   <---------ANAC55(2)                         ------                                                   --------->ANAC55(2)                     <---------ARR14(2)                                                --------->TGA2(2)                       <------------                                               <-----------HVH21                        -------------                                               <-----------TGA1                        <-------------                                              --------->TGA1a                          --------------                                              --------->ANAC55(1)                      --------------         ------>ZmHOX2a(2)                    --------->O2                             --------------        <------ZmHOX2a(2)                     --------->ANAC55(2)                      <-------------        <---------GLK1(1)                     <---------ANAC55(2)                      --------------        --------->GLK1(1)                     --------->ANAC58               <----------DOF2  -------       <---------ARR11(3)                     --------->ANAC58             <-------TEIL<-------------       --------->ARR11(3)<---------TOE2(3)    --------->ANAC46            <---------ARR14(2)  <------ ---------MYB46(3)       <---------TOE1(3)    ==========================================bZIP_DOF    - ----->MYB52(1)       ------>ZmHOX2a(2)      --------->SPL7               --------->GLK1(2)--------->ARR14(2)   aacggttgagatctcttgaattgatctaaggctaaaaatcgaagtcatacgtcacgaaataagaatgctcagtgaggttctttctccctcccatttctgg  1373700 ----->GT1 ---AGL15 -->AGL15 ----AGL2                                                                             <---------ARR11(3) --->AGL1                                                                            <---------CCA1(2) --->AG                                                                            <---------DAG2 --->AGL2                                                                   --------->RVE1(1) ----AGL1                                                                  --------->ARR11(3) --->AGL3                                                 ---------->DOF2  --------->GLK1(2) -->HSFB2a(2)                   ----------->TBP       --------->DAG2       <---------ARR11(3) ----AGL3 <----------DOF2     --------->HSFB2a(2)    ---------->DOF2      --------->CCA1(1) ---HSFB2a(2)                 <---------HSFB2a(2) --------->AHL20(2)      --------->RVE1(1) -------->ICU4       <----------DOF2            --------->YAB1 <----------DOF2     <----------DOF2<--   taaaaattgtctctttctctcttcttttctttctacaaaaacagaaacaaaaataaaaagtaaagctttctctaaaaaatctctcctttatcttcttcta  1373800                                                                                                  ---                                                                                              <------                                                                                           <---------O2                                                                                           --------->ANAC58                                                                                           --------->O2                                                                                           --------->bZIP60(2)                                                                                           --------->TGA1a                                                                                           <---------TGA1a                                                                                           ==========                                                                                           --------->ANAC58                                                                                    --------->bZIP60(2)                                                             --------->TOE1(2)      <---------O2  <--                                                            ----------->RAV1(2)     --------->TGA1a                                                       --------->ANAC46             --------->ANAC46                                                       --------->AtLEC2             <---------TGA1a                                                    <-----------------------TaNAC69(2)----------->HVH21                                                    <-------TEIL                    --------->ANAC58                                                   <------ZmHOX2a(2)                --------->ANAC58                       --------->ZAT2             --------->AGP1                    --------->O2<----              <----------DOF2 <---------ZAT14     --------->ARR14(2)                =================     --------------->AtSPL8   --------->ZAT14     <---------ARR14(2)        <---------ICU4 --------->ANAC46    <----------DOF2    <---------ZAT2            <---------At4g35610        --------->ATHB12<-------- -------ARR11(3) *TSS --------->AtLEC2           --------->At4g35610       <---------YAB1<---------ALFIN1   gctcttctttgtgcctctttcaccatgctgagtacagagagaactaagttcagatccatggaacctgcaacttcttcaccattgccacgagacacgtcgg  1373900                 <------NtERF2                                                                  <----                 <----------CDC5                                                                <----               <---------ANAC46                                                                 <----        --------->LBD16                                                                    <---------MYB46(3)      <---------LBD16                                                                     <----------DOF2     ------>ZmHOX2a(2)                                                                   <---------ANAC58    <------ZmHOX2a(2)                                                                    <---------ANAC46   <---------ARR11(3)                                                                <---------MYB52(1)   --------->ARR11(3)                                                              <---------ANAC58   --------->ARR14(2)                                                              <---------ANAC58   <---------ARR14(2)                                                              <---------ANAC46  <------ZmHOX2a(1)                                                           --------->HSFC1(2)<----  =================================HOX2a_HOX2a                                --------->HSFB2a(1) ------>ZAT2  <------NtERF2--------->ARR11(3)                                 <---------HSFC1(2)<---- ---DEAR3(1) ------>NtERF2 <---------ARR11(3)                                 <---------At4g35610 ===========================MYC_MYB       <------MYB46(1)                     --------->At4g35610 -------ZAT2 <---------ATERF1(1)          <------MYB83                   --------->HSFB2a(2)   <----- --NtERF2   --------->ALFIN1<------ZmHOX2a(2)                            <---------HSFB2a(2)   ------ ===========================MYC_MYB  --------->ANAC58         <<<<<<<<<TBF1   <---------HSFB2a(1) ---HVH21   <---------DEAR3(1)       --------->ANAC58<-----------GT1    <---------LBD16  <---------ANAC58   agcaggatcccgcgctggcgcagagtgaagatcagtctcaaggaaggtttatgtttttctcttcttcttcttactctggaagcttccgtttgcttgttgg  1374000                                         ----------->HVH21                                   <---------DAG2                                   <----------DOF2                                ---------->ID1  --------->GLK1(1)                                <-----------GT1--------->ARR14(2)  <---------AHL20(2)         --------------->AtSPL8 -----ANAC58                 <---------------AtSPL8 -----ANAC58             --------->AHL20(2)    <---------ARR14(2)                                 <-- -----ANAC46             <---------AHL20(2) <---------ANAC46                                   <----- --MYB83---------->ID1  --------->AHL20(2)--------->MYB52(1)                             <---------At4g35610 --MYB46(1)         <------ZmHOX2a(2)    ----------->TGA1                            <---------ARR14(2) ----MYB46(3)      --------->ARR11(3)  --------->YAB1                                --------->ARR14(2) --->MYB55(2)      <---------ARR11(3)  <---------AtLEC2     <----------DOF2         <---------GLK1(1)   gtgtttatttgtcttcaaatagatcatttaatttgtacttttcatgacggatttgttcatttctttttgttttttgaagacttagggtttctgcttatga  1374100                                                    <---------ANAC58           ---------->DOF2                                                    --------->ANAC55(2)     <------ZmHOX2a(1)                                                    <---------ANAC58      <---------TOE2(3)                                                --------->CCA1(2)   --------->ARR11(3)   --------->AHL20(2)         --------->ETT(2)              ---------->DOF2              <---------ARR11(3) --------->TOE2(3)  <---------YAB1                   ---------->DOF2  <---------ANAC55(2)  <---------LBD16 <---------AHL20(2) -------DAG2            <---------------------WRI1  ----------->GT1--------->YAB1    <-------TEIL ------GT1   ----------->GT1     <------ZmHOX2a(2) <-------TEIL   <---------YAB1--------->DAG2   ccttatggtagtagacagtgatttagagggattagatcaaagaaaggaagagatgcgtaacatttttgatgatattcaggataaagcttcattaattctt  1374200                                                                                           <---------HSFB2a(2)                                                                                           --------->HSFB2a(2)                                                                                          <---------LBD16                                                                                        --------->GLK1(2)                                      <<<<<<<<<MYB2       --------->AtLEC2             <---------GLK1(2)                                    <------MYB83     --------->ANAC46                  <---------ARR14(2)                                    <------MYB46(1)  --------->ANAC58                  --------->ARR14(2)                             <-----------RAV1(2)     --------->ANAC58          --------->LBD16 <-----                           ------>NtERF2           --------->MYB46(3)         --------->ANAC46 ------                          ----------->HVH21   --------->ANAC58                <---------HSFB2a(2)                 --------->ANAC58  <---------AtMYB61------->GAMYB             --------->HSFB2a(2)                 --------->ANAC58  --------->MYB59 <---------MYB52(2)        <---------LBD16   <-----        <---------ZAT14   --------->ANAC46    --------->ANAC58             <-----------HVH21   ------        --------->ZAT14   --------->ETT(2)  ---------->DOF2       <------ZmHOX2a(1) --------->YAB1   cagttctcacttaagtgggaagaaatcgacgacaggtttggttttctaaagcaacgagccatggagaaggaggtctctgtccggaatcagattctggagc  1374300  Previous    Next  AGI:  At3g04950.1    Description:  catalytic. similar to unnamed protein product [Vitis vinifera] (GB:CAO42982.1); contains InterPro domain Fumarylacetoacetase, C-terminal-related; (InterPro:IPR011234) Range:  from: 1371711    to: 1373483    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g04960.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71037.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609) Range:  from: 1373817    to: 1375856    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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