Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------TOE2(3)                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                          --------->AHL20(2)       <---------DAG2                                     --------->AHL20(1)       <----------DOF2                                    <---------AHL20(2)      <---------------AGL15                              --------->AHL20(2)     <-----------------AGL3                              <---------AHL20(2)     <-----------------AGL1                          --------->AHL20(2)     ===========================================================================================MADS_MADS     <-----------------AG                            <---------AHL20(2) <---------MYB46(3)                                  <---------AHL20(1) ----------->GT1                                     --------->AHL20(1)                           --- --------WOX13(1)           ------->TEIL         <---------AHL20(2)             <---------------AGL15 ----->ATHB12          <---------ICU4            --------->AHL20(2)          --------->AHL20(2)   <-- -----AHL20(2)      --------->YAB1              <---------AHL20(2)           <---------AHL20(2)  ---- -----YAB1         --------->AHL20(2)           <---------AHL20(1)       <---------DAG2          <--- ----AHL20(2)      <---------AHL20(2)           --------->AHL20(1)       <----------DOF2     -------- --->AHL20(2)     --------->AHL20(2)            --------->AHL20(2)    <-----------GT1---------->DOF2   aattggttacttttttggaaattaataatgtattttgtttttgagttaaatttaattaattaaattaatatttgactttttaatttttaaagaaatgaat  1371300                                                                        --------------->AtSPL8     <----------DOF2                                                    <---------------AtSPL3     <---------DAG2                                                 --------->AHL20(2)  <---------AHL20(2)                                       ----------->GT1  <-----------GT1               <-------TEIL              <---------TOE1(3)         <xxxxxxxxxxxxxxxx ------>AHL20(2)<---------AHL20(1)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -------AHL20(2)--------->AHL20(2)         --------->AHL20(2)       <---------AHL20(2) ----->AHL20(2) <---------AHL20(2)         <---------AHL20(2)   <---------YAB1<----------DOF2 ------AHL20(2) --------->AHL20(1)     <---------AHL20(2) --------->DAG2<---------------AtSPL8    <-- ->AHL20(2)    --------->AHL20(2)    --------->ANAC55(2)  <---------TOE2(3) ------->TEIL--------->AHL20(2)   taatttactttttaaaattttatttctaatgacatacatatgtaattacttacaaaaaataaggttatatttaaaatgtactttcccaaataatatagta  1371400                  <------MYB83           <---------------AGL15                                --------->ARR11(3)           --------------->AGL15                                <---------ARR11(3)          <-----------------AGL1                        <---------YAB1          <-----------------AGL3                      <--------HAHB4          <-----------------AGL2                      --------->YAB1       <-----------GT1          <-----------------AG                        <---------ICU4    --------->ARR11(3)        --------->GLK1(2)                            <---------ATHB12   <---------ARR11(3)       <---------GLK1(2)<---------AHL20(2)           --------->ICU4     <---------GLK1(2)       <---------ARR14(2)                ---------->DOF2--------->ICU4<---------TOE2(3)       --------->ARR14(2)             --------->HSFB2a(2) <---------AHL20(2)     ----------->ARR10  --------->AHL20(2)    --------->GLK1(1)--------->YAB1                <------- xxxxsmallRNA(le3)<------MYB46(1)     <---------HSFB2a(2) --------->AHL20(2)              <---------MYB46(3) ----ZmHOX2a(1)  --------->MYB59XXXXXXXXXXXXXXXXXXXXX>MIR173  <---------YAB1           <-----------RAV1(1)   ggataagtagattctctatttggtatttatattttctcttatagaaagaaatctaatcatttttatgatatttagattttctatttgtactgttgttact  1371500                                                                      ----------->GT1                       -------->P<---------LBD16         <<<<<<<<<<WRKY38                       ------>MYB83  <---------ARR11(3)  <<<<<<<<<<WRKY26                     --------->AtMYB61          <---------AHL20(2)<---------AHL20(2)                     ------->GAMYB<---------TOE1(2)      <XXXXXXXXXXXXXXXXXXXXMIR399F                    <---------MYB52(2)       <---------AHL20(1)--------->ARR11(3)                    --------->MYB46(3)       --------->AHL20(1)--------->AHL20(1)         <----------                    <---------MYB55(2)  --------->AHL20(2)     <---------AHL20(1)       <---------ICU4       <----------DOF2 ------>MYB46(1)  <---------AHL20(2)     <---------ARR11(3)      <---------YAB1 ----GT1           --------->ANAC46 <------ZmHOX2a(1)    <<<<<<<<<<WRKY43      ---------->DOF2   ----   cacttcttactttcaagtttcaaccaacaagtttctcaggattttaatatttttttttggtcaaatattttttggtaaaaaaaaagaacattattccatt  1371600                           <------ZmHOX2a(2)               <---------ICU4               --------->ATHB51               -------->ATHB1              --------->AHL20(2)              <---------ATHB51              --------->ICU4              <---------AHL20(2)           --------->AHL20(1)           <---------AHL20(2)                                                              <-------TEIL           <---------AHL20(1)            <---------ANAC58                                  ==========           --------->AHL20(2)            <---------ANAC46                                  ==========          --------->AHL20(2) <----------DOF2                                               ------>ZmHOX2a(2)          <---------AHL20(2)------>ZmHOX2a(2)                                             <------ZmHOX2a(2)        --------->YAB1    <---------ARR14(2)        <-----------RAV1(2)          ------------>CBF      --------->AHL20(2)  --------->ARR14(2)       <-------TEIL           --------->At5g28300     ---    --------->AHL20(2)    <---------ARR11(3)   <---------TOE1(3)      <---------ALFIN1    ===========  --------->YAB1<------------CBF         <---------ANAC58            <---------REM1(2)    =========== -GT1--------->YAB1       --------->ARR11(3)   <---------TOE2(3)   <---------ETT(1)      --------->ARR14(2) ----->AHL20(2)--------->ATHB12         ------>NtERF2              --------->ANAC46      <---------ARR14(2)   ttaaaaataaaaataaattattgtttccgatctttgaaacgctgcgtttaaggttcagggttttggattccgacacggtgaagaacaatgggatccattc  1371700                            --------->GLK1(1)                      --------->TOE1(2)                     ----------->RAV1(2)                     <---------At4g35610            ------>ZmHOX2a(1)            <---------At4g35610           *TSS--------->At4g35610                                      <---------AHL20(2) ====HOX2a_HOX2a   --------->REM1(1)                                   <---------MYB52(1) ==================HOX2a_HOX2a                                  ---------->DOF2  <---------LBD16   -- --->ZmHOX2a(1)<---------At4g35610     --------->TOE1(3)      ----------------->AGL1               <- ====HOX2a_HOX2a   <---------ALFIN1    --------->TOE2(3)      ----------------->AG                 -- ==================HOX2a_HOX2a   --------->LBD16       --------->ICU4----------->GT1<------NtERF2  <-   ctgctatcttcttcctctgctacacctgagaaaccctgaaaccctaattcttcagtaattagtttccaaagcagttaattttgggcggaaaatgtggtct  1371800                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(2)                                                                                       --------->HSFB2a(1)                                                                                       --------->HSFC1(2)                                                                           --------->ANAC58                                                                --------->ARR14(2)     <---------HSFB2a(1)                                                                <---------ARR14(2)     <---------MYB46(3)                                                             <---------ANAC58          <---------HSFC1(2)            --------->YAB1                                   <---------ANAC58       --------->LBD16 ------->HSFB2a(2)                                       --------->At4g35610      <---------LBD16 --------HSFB2a(2)                              ------>ZmHOX2a(1)          --------->ANAC58 ------->HSFC1(1)             ----------->RAV1(2)        <---------At4g35610    <---------ALFIN1    < --------HSFC1(1) <-----------GT1        <---------ARR11(3)  <---------ANAC46 <-----------HVH21     <   tcgagaactctcaagtatattttcaggctaagacctgaaccaatttcttcctcatcgtcttctgcgtattcgctctctcgcatcaccggaggttctccaa  1371900                                       <----------DOF2                                     ------>NtERF2                                     --------->At4g35610                                    --------->DEAR3(1)                                    --------->RAP2.3(2)                                   <------NtERF2                                   --------->DEAR4(2)                                   --------->ATERF1(1)                                   --------->ORA47(2)                                   --------->RAP2.3(1)                                  <---------ORA47(2)                                  <---------ERF1                                  <---------DEAR4(2)                                  <---------RAP2.3(1)                                  <---------RRTF1(1)                                  <---------RAP2.6(1)                                  <---------ATERF1(1)                                  --------->ABI4(2)               ------->GAMYB     <---------DEAR3(1)              <---------MYB52(2) <---------RAP2.3(2)              --------->MYB46(3) <---------RRTF1(3)          --------->At4g35610    --------->DEAR3(1)         --------->RAP2.6(2)    --------->ATERF1(1)                                    --------->ARR14(2)       <---------At4g35610      --------->RAP2.3(1)                                    <---------ARR14(2)       --------->At4g35610     <---------ATERF1(1)                                    --------->YAB1       --------->ZAT2         --------->O2                                  <---------LBD16       <---------ZAT2         <---------DEAR3(1)              ---------->DOF2--------->LBD16 <-----------HVH21            --------->ANAC46              <------ZmHOX2a(2)--------->ANAC46 --------->LBD16             <---------LBD16          <---------ARR14(2)   <---------LBD16 ---------ANAC58            <---------ALFIN1          --------->ARR14(2)  <---------At5g28300 ---------ANAC58 <------ZmHOX2a(2)------>NtERF2 <---------MYB46(3)       <-----------GT1      <------   ttccgtcgcagcagcaacgatcgattacctccacggcgccgcttaatggatggatggattcgatcaaaggtgtttttaccgggaacaaggatactccttt  1372000                                                               <---------WOX13(1)                                                             --------->ATHB12                                                        <---------ANAC58                                                        --------->O2                                                        <---------O2                                                        <---------ANAC58                                                        <---------ANAC46                                                        <---------ANAC55(2)                                                        <---------TGA1a                                                        --------->TGA1a                                                        --------->ANAC55(2)                                                        <---------ANAC55(1)                                                <---------AtLEC2 <---------WRKY18(1)                                        --------->SPL7 <-------TEIL  <---------ZAT14                                      --------->LBD16 --------->CCA1(2)                        ==========================================bZIP_DOF   <---------MYB46(3)        --------->ARR14(2)           --------->ANAC46<---------ARR14(2)  --------->ICU4  --------->ARR14(2)        <-----------ARR10           <---------LBD16  --------->ARR14(2)  <---------AtMYB61 ----DOF2   -------->P  <----------DOF2<---------MYB52(1)   <---------YAB1  <---------ANAC46      ---   agaagaatcaaatctacccgttgaagctttcactcttctccgtaagtcttacatggatacgtgtgattgactgtaatggtggatagatcgatatactcat  1372100                                                                              --------->ANAC46                                                                              --------->ANAC58                                   <---------GLK1(1)                        ---------->DOF2                                   --------->GLK1(1)                    --------->GLK1(1)                                  <---------ARR14(2)             <---------MYB52(1)         <--------                 ----------->GT1 <------ZmHOX2a(1)              <-------GAMYB --------->ANAC58          <----------DOF2      <---------TOE2(3)               <---------MYB46(3)   --------->ZAT14<- ------->DOF2   <---------WOX13(1)--------->ARR14(2)        ------------>AtMYB77    <---------ZAT14--   caaagctattctctttggattgaaaattgaatttaggatttgctgatgaattgaagaatgctagacggttagggaaattcaagcagtacattgtgggacg  1372200  Previous    Next  AGI:  At3g04950.1    Description:  catalytic. similar to unnamed protein product [Vitis vinifera] (GB:CAO42982.1); contains InterPro domain Fumarylacetoacetase, C-terminal-related; (InterPro:IPR011234) Range:  from: 1371711    to: 1373483    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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