Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ==========================HOX2a_HOX2a         --------->ARR11(3)         <---------ARR14(2)         --------->ARR14(2)  ------>MYB46(1)  ------>MYB83 ------>GAMYB                                   --------->ANAC46 -------->DREB2C(2)                             ========================bZIP_DOF ------->DEAR3(2)                               --------->O2 -->NtERF2<------ZmHOX2a(2)                 ------>ZmHOX2a(1) ------>HVH21      <---------ZAT14         --------->ANAC46 ---->ETT(2)       --------->ZAT14      <---------ARR14(2)                    <---------YAB1 ---->DEAR3(1)--------->ZAT2            --------->ARR14(2)               --------->ALFIN1 --->ATERF1(1)<---------ZAT2           --------->GLK1(1)               --------->ALFIN1 -NtERF2 --------->AGP1       --------->ZAT18   <---------O2        <---------DEAR3(1) --->RAP2.3(1)--------->At4g35610     <---------MYB52(1)            <---------AtMYB61            ---- >NtERF2<---------At4g35610   <---------ZAT18   --------->TGA1a <---------At4g35610 <---------ANAC58 ---ATERF1(1) <---------At4g35610    --------->LBD16         ---------->DOF2<-----------GT1      ---- --DEAR3(1) <-----------RAV1(2)    <---------LBD16        ------>NtERF2<---------ANAC46  ------>ZmHOX2a(1) -LBD16 --------->At4g35610  <------ZmHOX2a(1)<---------ALFIN1  --------->At4g35610 <---------ANAC58   gaccgacttcagatccagcagagtagtaagaggacactccggtatcctccacgtctatgccgagagagcggaggtgtgttaccatcgcgtccttgaggct  1347300                                                        --------->ARR14(2)                                                        <---------ARR14(2)                                                       --------->At4g35610                                                       --------->ZAT2                                              <------NtERF2  ------>NtERF2                       <---------YAB1        ------>NtERF2  --------->LBD16                       --------->ICU4       --------->ATERF1(2)                <---------LBD16             <---------DEAR3(1)              <---------ARR14(2)            <---------ATERF1(2)             <---------At4g35610            --------->ANAC46------>NtERF2             --------->ZAT2                --------->RAP2.6(3)     <----------DOF2        <---------At4g35610          <---------At4g35610            ------>ZmHOX2a(2) --------->DEAR3(1)        --------->TOE2(3)   ---------->DOF2--------->LBD16        --------->ETT(2) <---------LBD16            --------->TOE1(3) ----->ANAC58--------->At4g35610     <---------MYB46(3)<---------ZAT2              *TSS   --------->At4g35610 ----->ANAC58<---------ZAT2       <---------MYB46(3)   <---------At4g35610   <----------DOF2  -------   cgctccaaagtcatcagctccggtgatgattttcaacggttgatcgacggcagaaacagctccggccatcttttcagagctttgaaaccttaagctgtga  1347400          <---------AHL20(2)        <---------------AGL15        --------------->AGL15       <-----------------AGL3       --------->YAB1                                                                <---------AHL20(2)       ================================================================================MADS_MADS       --------->TOE1(3)                                                      <---------TOE2(3)   ---       --------->TOE2(3)                                               <---------------AGL15      ---     --------->GLK1(2)              ---------->DOF2                    --------------->AGL15 --------    <---------GLK1(2)  <---------LBD16            --------->ZAT6      --------->ANAC46   --------->ZAT6 ---->HVH21 <------------CBF  ---------->DOF2   <-----------GT1     <-----------GT1<---------YAB1<---   ccagaagaatcttaaattggaaattttcggaaaaaagagaaagacataagttacactactcttccacatttcaccctattaagttattttaacacaaaag  1347500                                  --------->AHL20(2)                     <---------TOE2(3)--------->AHL20(2)                     --------------->AtSPL8                     --------->DAG2   <---------AHL20(2)          --------->AHL20(2)      <---------AHL20(2)          <---------AHL20(2)     <---------AHL20(2)                                   ------>NtERF2 ------>ARR14(2)     --------->MYB59 --------->AHL20(2) ----------->GT1               <---------RAP2.6(3) ------>PCF2         <---------------AtSPL8---------->DOF2         --------->YAB1     ----------->RAV1(1) -->DOF2--------->YAB1        --------->AHL20(2)       --------->ALFIN1              <----------ID1 ---ZmHOX2a(1) --------->AHL20(2)--------->AHL20(2)  <---------ANAC46                <---------ETT(1)   gaccctccaattttaaatgaaataaggtactataaattaataaataaaagttttagggtggaaacaaaattataagggaacaacatgccgacaaaaaaaa  1347600                                                      <------NtERF2                                                      ------>NtERF2                                                    --------->ATERF1(2)                                                    <---------ANAC58                                                    <---------DEAR3(1)                                                    <---------RAP2.6(2)                                                    *TSS                        ------>NtERF2                                                    <---------ATERF1(2)      <---------ATERF1(1)                                                    <---------ANAC46         ------>NtERF2                                                    <---------RAP2.3(2)     --------->DEAR3(1)                                                    <---------ANAC58        --------->RAP2.3(3)                                                   <------NtERF2            --------->DREB2C(2)                                                   --------->ATERF1(1)      ----------->HVH21                                                   --------->RAP2.6(3)     --------->ERF1                                                 --------->ALFIN1          --------->RAP2.3(1)                                               <---------O2                --------->RRTF1(1)                                               --------->O2                --------->DEAR3(2)                                               =====================bZIP_DOF--------->At1g77200                                               <---------ANAC46            <------NtERF2                                               <---------ANAC58            --------->ORA47(2)                                               <---------TGA1a             --------->ATERF1(1)                                               <---------ANAC58           <---------At4g35610                                              --------->ALFIN1            --------->At4g35610                                           <------NtERF2                  ------>NtERF2                                         <---------ANAC46                 --------->LBD16                                         <---------DEAR3(1)               <---------ATERF1(1)                                        <---------LBD16                  <---------ATERF1(2)                                        ------>NtERF2<---------RAP2.3(1) --------->ATERF1(2)                                        <------NtERF2------>NtERF2<---------AHL20(2)                                        <---------At4g35610      <---------AHL20(2)                                        --------->ATERF1(1)      --------->AHL20(2)                                       <---------RAP2.3(1)       <---------AHL20(1)       --------->ANAC46              --------->TOE2(3)       <---------DEAR3(1)    --------->AHL20(2)<------NtERF2           ----------->RAV1(1)        <---------RAP2.3(2)<----------DOF2 --------->DEAR3(1)   --------->DAG2                    <---------LBD16<---------RAP2.3(3) <---------RAP2.6(2)  ---------->DOF2       --------->AHL20(2) --------->ATERF1(1)   --------->AHL20(1)   --------->YAB1   aaaaaaaagggaacaacataaacatttttaatataaacatgcggcggagtcgtggcggcctttaaaataaaattgccgccgacgactattgtaagtcact  1347700                                     <-----------HVH21                                 --------->ARR11(3)                                 <---------ARR11(3)                                --------->GLK1(1)                       <---------ANAC58                  --------->ALFIN1  --------->WOX13(1)                <------NtERF2   <---------GLK1(1)               --------->LBD16  <---------RVE1(1)              <---------ANAC58 --------->ARR11(3)              <---------ANAC58 <---------ARR11(3)              <---------ANAC46 --------->ARR14(2)                                           <--------             <---------LBD16   <---------ARR14(2)      <----------DOF2                      ---------         <---------ICU4<---------ANAC46  <---------At4g35610                       <----------DOF2        --------->ICU4 <---------ANAC58  --------->At4g35610                       <---------DAG2  --   cggctaagtaagaatggcgggagtggcttgccagatatctatcagctcatcttcgacctttagggtgagtctctatggcgattagcttttccttcgctga  1347800                                          <---------ATHB12              --------->LBD16                           ------>ZmHOX2a(2)                           --------->DEAR3(1)           -    <---------YAB1       <---------ARR11(3)              <---------ANAC58               <---------At4g35610 <---------MYB52(1)      --------->ARR11(3)              <---------ANAC58               --------->At4g35610 -At4g35610    <---------HSFB2a(2)      --------->WOX13(1)<----------DOF2               <---------ZAT2 >At4g35610    --------->HSFB2a(2)   <-------GAMYB      --------->ABI4(2)<------NtERF2  --------->ZAT2 ------->YAB1 <---------LBD16       ----------->GT1 <---------DEAR3(1)<---------LBD16 <-----------RAV1(2)   atcgttatgttttagttctggatttttgatcttgcagagggttaatcaatggccacggtgcttctctggttcgccggagaagaaaacaccagctgttttg  1347900            <---------ZAT18         --------->MYB52(2)       <---------MYB52(1)                    <---------ZAT2       <--------P                       <---------LBD16      <-------GAMYB                  <---------GLK1(1)      --------->At5g28300           <---------ARR11(3)     <---------DEAR3(2)             --------->ARR11(3)     --------->MYB55(2)          <--------P<---------MYB52(1)                                 -------     <---------MYB46(3)         <-------GAMYB--------->ZAT2                              <---------HSFB2a(2)    <---------DEAR3(1)          <---------MYB52(1)                               ------>ZmHOX2a(2)  ------------>AtMYB77         --------->LBD16             ------->GAMYB       <---------ARR14(2) <---------DEAR3(1)          <---------LBD16 --------->ABI4(2)                 --------->ARR14(2) --------->ZAT18           <-----------GT1--------->LBD16  --------->TOE2(3)  <------ZmHOX2a(1)   <-- -------->ALFIN1   --------->ANAC55(2)------>ZmHOX2a(2)   --------->MYB46(3)<---------TOE2(3)--------   aagtgggcggttagtggagttactgaatttctccggttgatctccggtgctccgtcttcaacctccatcgctacaaataaggatcggtaatctcgaaaag  1348000                                              --------->ALFIN1                                            <---------MYB46(3)                          <---------ARR14(2)                                           --------->ALFIN1                <------ZmHOX2a(2)       <---------TOE2(3)                   <---------AtMYB61             --------->At4g35610       <-       <---------TOE1(3)   <---------MYB52(1) <---------ANAC46           <---------At4g35610 <------- -->DAG2               ------>ZmHOX2a(1)<-----------RAV1(1)           <---------At4g35610    -------- --------DOF2          ====================================HOX2a_HOX2a--------->At4g35610   <-------- -->DOF2      <---------YAB1      <---------MYB52(1)<------ZmHOX2a(2) <------NtERF2  <---------TOE2(3)   ctttgaattaaggtttcttattctcctctgttcgtcgttagtctggtggtggagatcgatttgaatactggctgcagatcaaagaatgaggttactgctg  1348100          --------->bZIP60(1)             --------->HSFB2a(1)          <---------bZIP60(1)             --------->HSFC1(2) --------At4g35610  <---------ARR14(2)    <---------HSFC1(2) --At4g35610        --------->ARR14(2)    <---------HSFB2a(1)                        <---------AtLEC2 ->At4g35610   <---------ANAC46  <---------GLK1(2)   <-----------TGA1        <---------MYB52(1) ---RAV1(1) ----------->HVH21<------ZmHOX2a(2)       <-----------HVH21     <----------DOF2   gagatgtcgatgatgtgatggggattttgagatcagattatcgaaatttctacttcgtcactggtatatgactctcgctgttcgtctgcattgattcagt  1348200  Previous    Next  AGI:  At3g04880.1    Description:  DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2). Identical to DNA-damage-repair/toleration protein DRT102 (DRT102) [Arabidopsis Thaliana] (GB:Q05212;GB:Q941E8); similar to unnamed protein product [Vitis vinifera] (GB:CAO43020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65782.1); contains InterPro domain DNA-damage-repair/toleration protein, DRT102 (InterPro:IPR012100); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 2, conserved barrel (InterPro:IPR013096); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051); contains InterPro domain Ribose/galactose isomerase; (InterP Range:  from: 1346279    to: 1347383    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g04890.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46100.1); similar to unknown [Picea sitchensis] (GB:ABK21558.1); contains domain SSF54427 (SSF54427) Range:  from: 1347652    to: 1349208    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version