Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                   <-                                             ===================================HOX2a_HOX2a        --                                             <------ZmHOX2a(1)                                     <-                                        --------->ANAC58                                          <--                                     --------->LBD16                                             <---                                     <---------SPL7                                              <---                                   =================HOX2a_HOX2a                                 <----                                   ------>ZmHOX2a(2)                                   <---------GLK1(1)                                   <---------LBD16                                     --------->GLK1(1)                                  ==================HOX2a_HOX2a                       <---------ARR11(3)                   --------->GLK1(1)<---------HSFB2a(2)                               --------->ARR11(3)                   <---------ZAT2 <------ZmHOX2a(2)                                   <---------ARR14(2)                   <---------At4g35610  --------->ANAC58   ---------->DOF2            --------->ARR14(2)                   --------->ZAT2--------->ARR14(2)    --------->CCA1(2)             --------->HSFB2a(1)             --------->MYB52(1)  <---------ARR14(2) ----------->ARR10           <-------------------- <------ZmHOX2a(1) --------->At4g35610 --------->SPL7 <---------ARR14(2) ------>ZmHOX2a(2)      <----   cgaggaaggaagagataactgagctccatggttcggatccggacgcaggacaaggagatttgaaaggagttttgatccaagcgtcgaagatttccaaggc  1347000                                                                      <------NtERF2                                                                     ------>NtERF2                                                                    <---------ANAC46                                                                   <------NtERF2                                                                   --------->ATERF1(1)                                                                  <---------RAP2.3(1)    <---------LBD16                                               ------>NtERF2    --------->LBD16                                              <---------RAP2.6(2)   <---------LBD16                                               <---------RAP2.3(3)              ---   <---------ANAC46                                              <---------DEAR3(1)               <--  <---------LBD16                                                <---------RAP2.3(2)            ----- -------->ARR14(2)                                             <---------DOF5.7(2)             <----- ---------ARR14(2)                                            --------->WRKY38(1)              <----- ---------DOF2                                               --------->DOF5.7(2)               <----- ------->ARR14(2)                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)<------NtERF2 --------ARR14(2)                                           =====================================MYC_MYB -----GAMYB                      <------ZmHOX2a(1)          <-------GAMYB              <---------TGA1a ------DEAR3(2)                  =============================HOX2a_HOX2a   <---------LBD16 <-------- ------MYB46(3)       <------NtERF2                    ------>ZmHOX2a(2)  ----------->HVH21 <-------- -----DEAR3(1)       --------->LBD16          <---------ANAC46----------->HVH21        --------->O2 -WRI1              <---------ANAC46          <---------ANAC58--------->WRKY45         <---------O2<- -----RAP2.6(2)    <---------LBD16            <---------ANAC58--------->WRKY12     --------->CCA1(2)-   ggtttccggggatgttttgatgccggagaatgcgaggacattgcaattgcttattgatcgagcgttgacggcgtcttcgacggagagacaagtggctgcg  1347100                                                  <---------At4g35610                                                  <---------ZAT2                                                  --------->ZAT2                                                  --------->At4g35610                                                 ----------->RAV1(1)                                                <-----------RAV1(2)                                               --------->LBD16                                               ------>NtERF2                                              ----------->RAV1(1)                                              --------->DEAR3(1)                                             --------->ATERF1(1)                                             <------NtERF2                                             --------->RAP2.3(1)                                    -                                            <---------ATERF1(1)                                     -                                            ------>NtERF2                                          --                                           <---------DEAR3(1)                                    ----                                           --------->ALFIN1                                     -----                                           --------->ARR14(2)                                   -----      --------->LBD16                     <-------PIF5                                         <-----      <------NtERF2                       --------->ATERF1(1)                                  ------     --------->LBD16                      ------->PIF5                                         ------     <---------LBD16                     <---------DEAR3(2)                                    ------    <---------LBD16                      <---------ATERF1(1)                                  <------  ------>NtERF2                          <---------DEAR4(2)                                  <------- --------->ANAC58                       <---------DEAR3(1)                                  <-------- --------->ANAC46                      <------NtERF2                                       <---------TGA1a --------->ANAC58                     ------>NtERF2                                        --------->O2 ------>ARR14(2)                      <---------RAP2.3(1)                                  <---------O2 -------ARR14(2)                     --------->ANAC46                                      <---------bZIP60(2) ---->REM1(2)                        --------->DEAR3(1)                                    ========== ----ANAC58                          <---------DEAR3(1)                                   --------->ATERF1(1) ----ANAC46                        ------>NtERF2<------NtERF2 ------>NtERF2             ----------->HVH21 ----ANAC58                        <---------ATERF1(1)        --------->LBD16           <---------ARR14(2) -RAP2.3(3)                       ----------->HVH21          --------->RAP2.6(2)        --------->ARR14(2) -DEAR3(1)                    <---------GLK1(1)--------->At4g35610               ====================bZIP_DOF --------ATERF1(1)<------NtERF2   --------->DEAR3(1)      --------->ANAC46       ---------->DOF2----- -------->ATERF1(1)           --------->GLK1(1)<---------At4g35610   <---------LBD16<---------At4g35610   tagacgcccgggaacttgttggcgaacatcgcaactccgacgccggtgccgcagcagactaagccgcgaacttcggaagacgatgaagcggagacgcggc  1347200          ==========================HOX2a_HOX2a         <---------ARR14(2)         --------->ARR11(3)         --------->ARR14(2)  ------>MYB46(1)  ------>MYB83 -------->DREB2C(2) ------>GAMYB                                   --------->TGA1a ------->DEAR3(2)                               ========================bZIP_DOF -->NtERF2<------ZmHOX2a(2)                     <---------O2 ---->DEAR3(1)                              ------>ZmHOX2a(1) ---->ETT(2)       <---------ZAT14         --------->ANAC46 -NtERF2 --------->AGP1                 --------->ARR14(2)                    <---------YAB1 --->ATERF1(1)--------->At4g35610       <---------ARR14(2)               --------->ALFIN1 --->RAP2.3(1)--------->ZAT2           --------->GLK1(1)               --------->ALFIN1 >NtERF2<---------At4g35610   <---------ZAT18   --------->O2        <---------AtMYB61 ---ATERF1(1) <---------ZAT2  --------->ZAT18   --------->ANAC46    <---------DEAR3(1)           ---- --DEAR3(1) <-----------RAV1(2)       <---------MYB52(1)        --------->At4g35610 <---------ANAC58 -LBD16 --------->At4g35610  <------ZmHOX2a(1)<---------ALFIN1  <---------At4g35610 <---------ANAC58 =======MYC_MYB    --------->ZAT14   --------->LBD16         ---------->DOF2<-----------GT1      ---- ------>HVH21 <---------At4g35610  <---------LBD16        ------>NtERF2<---------ANAC46  ------>ZmHOX2a(1)   gaccgacttcagatccagcagagtagtaagaggacactccggtatcctccacgtctatgccgagagagcggaggtgtgttaccatcgcgtccttgaggct  1347300                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                       --------->At4g35610                                                       <---------ZAT2                                              <------NtERF2  ------>NtERF2                       <---------YAB1        ------>NtERF2  --------->LBD16                       --------->ICU4       <---------ATERF1(2)                <---------LBD16             <---------DEAR3(1)              <---------ARR14(2)            --------->ATERF1(2)             --------->ZAT2                 --------->ANAC46------>NtERF2             --------->At4g35610           --------->RAP2.6(3)     <----------DOF2        --------->At4g35610          <---------At4g35610            --------->ETT(2)  --------->DEAR3(1)        --------->TOE2(3)   ---------->DOF2--------->LBD16        ------>ZmHOX2a(2)<---------LBD16            --------->TOE1(3) ----->ANAC58<---------At4g35610     <---------MYB46(3)<---------At4g35610         *TSS   <---------At4g35610 ----->ANAC58<---------ZAT2       <---------MYB46(3)   --------->ZAT2        <----------DOF2  -------   cgctccaaagtcatcagctccggtgatgattttcaacggttgatcgacggcagaaacagctccggccatcttttcagagctttgaaaccttaagctgtga  1347400          <---------AHL20(2)        --------------->AGL15        <---------------AGL15       --------->YAB1       <-----------------AGL3                                                        <---------AHL20(2)       ================================================================================MADS_MADS       --------->TOE2(3)                                                      <---------TOE2(3)   ---       --------->TOE1(3)                                               <---------------AGL15      ---     --------->GLK1(2)              ---------->DOF2                    --------------->AGL15 --------    <---------GLK1(2)  <---------LBD16            --------->ZAT6      --------->ANAC46   --------->ZAT6 ---->HVH21 <------------CBF  ---------->DOF2   <-----------GT1     <-----------GT1<---------YAB1<---   ccagaagaatcttaaattggaaattttcggaaaaaagagaaagacataagttacactactcttccacatttcaccctattaagttattttaacacaaaag  1347500                                  <---------AHL20(2)                     --------->MYB59  --------->AHL20(2)                     <---------TOE2(3)<---------AHL20(2)                     --------->DAG2  --------->AHL20(2)          <---------AHL20(2)      --------->AHL20(2)          --------->AHL20(2)     <---------AHL20(2)                                   ------>NtERF2 ------>PCF2         --------------->AtSPL8             ----------->GT1               <---------RAP2.6(3) ------>ARR14(2)     <---------------AtSPL8---------->DOF2         --------->YAB1     ----------->RAV1(1) -->DOF2--------->YAB1        --------->AHL20(2)       --------->ALFIN1              <----------ID1 ---ZmHOX2a(1) --------->AHL20(2)--------->AHL20(2)  <---------ANAC46                <---------ETT(1)   gaccctccaattttaaatgaaataaggtactataaattaataaataaaagttttagggtggaaacaaaattataagggaacaacatgccgacaaaaaaaa  1347600                                                      <------NtERF2                                                      ------>NtERF2                                                    <---------RAP2.3(3)                                                    <---------RAP2.3(2)                                                    <---------ANAC46                                                    <---------RAP2.6(2)                                                    <---------ANAC58            ------>NtERF2                                                    <---------ANAC58         ------>NtERF2                                                    *TSS                     <---------ATERF1(1)                                                    <---------DEAR3(1)      ----------->HVH21                                                    <---------ATERF1(2)     --------->DREB2C(2)                                                   --------->RAP2.6(3)      --------->RAP2.3(3)                                                   <------NtERF2            --------->DEAR3(1)                                                   --------->ATERF1(1)     --------->ERF1                                                 --------->ALFIN1          --------->DEAR3(2)                                               <---------O2                --------->ATERF1(1)                                               <---------ANAC58            --------->RAP2.3(1)                                               --------->O2                --------->RRTF1(1)                                               <---------ANAC46            --------->ORA47(2)                                               =====================bZIP_DOF--------->At1g77200                                               <---------TGA1a             <------NtERF2                                               <---------ANAC58           --------->LBD16                                              --------->ALFIN1            <---------ATERF1(1)                                           --------->ATERF1(1)            --------->At4g35610                                         <---------ANAC46                 ------>NtERF2                                         <---------DEAR3(1)               <---------At4g35610                                        <---------LBD16                  --------->DEAR3(1)                                        ------>NtERF2------>NtERF2<---------AHL20(2)                                        --------->ATERF1(1)      <---------AHL20(2)                                        <------NtERF2<---------RAP2.3(1) --------->ATERF1(2)                                        <---------At4g35610      <---------AHL20(1)                                       <---------RAP2.3(1)       --------->AHL20(1)       --------->ANAC46              --------->TOE2(3)       <---------DEAR3(1)         --------->AHL20(2)   --------->YAB1           ----------->RAV1(1)        <---------RAP2.3(2)   --------->AHL20(2)<------NtERF2   --------->DAG2                    <---------LBD16--------->ATERF1(2)  <---------ATERF1(2)  ---------->DOF2       --------->AHL20(2) <------NtERF2 <----------DOF2<---------RAP2.6(2)   aaaaaaaagggaacaacataaacatttttaatataaacatgcggcggagtcgtggcggcctttaaaataaaattgccgccgacgactattgtaagtcact  1347700                                     <-----------HVH21                                 --------->ARR11(3)                                 <---------ARR11(3)                                <---------RVE1(1)                       <---------ANAC58                  --------->ALFIN1  --------->WOX13(1)                <------NtERF2   <---------GLK1(1)               --------->LBD16  --------->GLK1(1)              <---------ANAC58 <---------ARR11(3)              <---------ANAC58 --------->ARR14(2)              <---------ANAC46 <---------ARR14(2)                                           <--------             <---------LBD16   --------->ARR11(3)      <----------DOF2                      ---------         <---------ICU4<---------ANAC46  <---------At4g35610                       <---------DAG2        --------->ICU4 <---------ANAC58  --------->At4g35610                       <----------DOF2 --   cggctaagtaagaatggcgggagtggcttgccagatatctatcagctcatcttcgacctttagggtgagtctctatggcgattagcttttccttcgctga  1347800                                          <---------ATHB12              --------->LBD16                           ------>ZmHOX2a(2)                           --------->DEAR3(1)           -    <---------YAB1       --------->ARR11(3)              <---------ANAC58               --------->At4g35610 <---------MYB52(1)      <---------ARR11(3)              <---------ANAC58               <---------ZAT2 -At4g35610    --------->HSFB2a(2)      --------->WOX13(1)<----------DOF2               --------->ZAT2 >At4g35610    <---------HSFB2a(2)   <-------GAMYB      --------->ABI4(2)<------NtERF2  <---------At4g35610 ------->YAB1 <---------LBD16       ----------->GT1 <---------DEAR3(1)<---------LBD16 <-----------RAV1(2)   atcgttatgttttagttctggatttttgatcttgcagagggttaatcaatggccacggtgcttctctggttcgccggagaagaaaacaccagctgttttg  1347900  Previous    Next  AGI:  At3g04880.1    Description:  DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2). Identical to DNA-damage-repair/toleration protein DRT102 (DRT102) [Arabidopsis Thaliana] (GB:Q05212;GB:Q941E8); similar to unnamed protein product [Vitis vinifera] (GB:CAO43020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65782.1); contains InterPro domain DNA-damage-repair/toleration protein, DRT102 (InterPro:IPR012100); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 2, conserved barrel (InterPro:IPR013096); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051); contains InterPro domain Ribose/galactose isomerase; (InterP Range:  from: 1346279    to: 1347383    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g04890.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46100.1); similar to unknown [Picea sitchensis] (GB:ABK21558.1); contains domain SSF54427 (SSF54427) Range:  from: 1347652    to: 1349208    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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