Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->AHL20(1)               --------->AHL20(2)                <---------HSFB2a(2)              <---------AHL20(2)                 --------->HSFB2a(2)                       <---------ANAC58              --------->AHL20(2)              <---------YAB1                               <---------ANAC58           <---------AHL20(2)                --------->AHL20(2)           --------->YAB1 ------->TEIL           --------->AHL20(2)              <---------YAB1          --------->CCA1(2)     <-----------GT1   ---------->DOF2                         --------->ICU4        --------->YAB1       ----------->GT1 <---------ZAT6<---------AHL20(2)        <---------ICU4       ---------->DOF2        <---------TOE2(3)   ttagtgaaagttttaaattaattagttttagttttacttaaaatcatttttatagaaataaaaacaaagataagaatgaaaacgaataatgtaacttgtt  1336900                                                   <-----------GT1                                                --------->ANAC55(1)                                                --------->ANAC46                                    -                                              <---------ALFIN1                                      <                                            <---------ALFIN1                                        <                                            ----------->RAV1(1)   <---------ALFIN1                  -                                         ------>NtERF2  ------>MYB83     <------------CBF           -                                        --------->ANAC58------>MYB46(1) <---------AtLEC2          <--         ---------->DOF2                --------->ANAC58--------->MYB52(1)                   ------>ZmHOX2a(1)  --------->ALFIN1         <-----------GT1 --------->RAP2.3(3)  ----------->RAV1(1)        ----------   agatgtggtagcaaagaaggcccataaaaaaaccatttgaagacgcccacacttaaccaaacgtcccaacacttgcattgctctctctagccctcctgaa  1337000         --------->ANAC58         --------->ANAC58   --------->At4g35610                                   --------->WRKY45 -------->At4g35610                                      --------->WRKY12 ---------At4g35610                                      --------->WRKY38(1) ---------ZAT2                                          --------->DOF5.7(2)                   ------- -------->ZAT2                   <-----------GT1       <-------GAMYB <<<<<<<<<TBF1         <--------- ---------->RAV1(2)         <---------YAB1            <---------MYB46(3)                 <---------YAB1 ---------RAV1(2)   <----------DOF2 <----------DOF2   --------->MYB52(2)      ------>ZmHOX2a(1)   --- ->RAV1(2)    <---------ALFIN1<------------CBF        --------->MYB55(2)<<<<<<<<<TBF1 ---------->ID1   tcagctgcttcaagcccaacttcttttcttcttattgactttccttcttctctcggtcgttgactctcttcttcttcttcctcttcttgttcttattgat  1337100                                                                       <---------ETT(2)                                                                     ------>NtERF2                                                                    --------->RAP2.3(3)                                                                    --------->DEAR3(1)                                                                    <---------ANAC46                                                                    --------->RAP2.3(2)                                                                   --------->ATERF1(1)                                                                   --------->ORA47(2)                                                                   --------->RAP2.3(1)                                                                   <------NtERF2                                                                  ------>NtERF2                    <-                                                                  <---------ATERF1(1)             <--                                                                 --------->ANAC46                 ---                                                                 --------->RAP2.3(2)            <----                                                                 --------->DEAR3(1)           -------                             <---------GLK1(1)                   --------->RAP2.6(2)          -------                             --------->GLK1(1)   --------->MYB46(3)--------->DEAR4(2)         <------                           <------ZmHOX2a(1)   --------->ANAC58 --------->ATERF1(1)      ---------->DOF2                         <---------TOE2(3)     --------->ANAC58 --------->ERF1         ----------->HVH21 -->ATHB12        ------------>CBF           --------->ZAT14    --------->MYB46(3)   --------->LBD16 ---CBF<----------DOF2<---------ATHB12    ------->GAMYB        --------->At4g35610--------->MYB52(1) --------->CBF    <-------TEIL           --------->MYB46(3)--------->TOE2(3)    --------->MYB46(3)<--   ttcaattttctttgtgcaggttcaatgaaggatttcaacttcaacagtccagccatcgaaacattagccgccgtctacataatccaccggtgaaagtgta  1337200       <------ZmHOX2a(2)                                                                          ---      <---------ARR11(3)                                                                         <---      --------->ARR11(3)                                                                        <----     <---------GLK1(1)                                                                          ----- <---------ANAC46                                                                          ---------- --------->ALFIN1                                                                        <---------O2 --------MYB46(3)                                                                        <---------ANAC55(2) -------AtMYB61                                                                          --------->TGA1a ------>ALFIN1                                              ---------->DOF2              <---------TGA1a -----ANAC46                                          <------------CBF                   --------->ANAC55(2) -->ZAT18                                      --------->ARR14(2)                   --------->ANAC58 -->ZAT14 ----------->GT1              <-----------HVH21    =======================================bZIP_DOF ---ZAT14 <---------ANAC55(2) <---------ZAT14  <---------ARR14(2)                   --------->ANAC58 -------ZAT6             ----------->HVH21    <------ZmHOX2a(1)          ----------->GT1 --------->O2   gtggtggagatcatgtgaaattagggtctgactgtagaagtagtcacaggatactgaattgcaaaagatagaatggcgataaatgtaagaaacgtgacga  1337300                                                                                                   --                                                                                                 ----                                                                                                 <---                                  --------->ANAC46                                          <------NtERF2       --------->At4g35610        --------->ANAC58                                         <---------MYB46(3)       <---------At4g35610        --------->ANAC58              --------->TOE1(1)          ------>NtERF2 --->ZmHOX2a(2)                 <-----------GT1                ------>ZmHOX2a(1)      <---------At5g28300 ---ZmHOX2a(2)             <---------GLK1(2)            <---------DAG2             <----------DOF2<-- -----ARR14(2)        ----------->RAV1(1)               <----------DOF2       ---------->DOF2  ------ ---->ARR14(2)       --------->At1g77200              ------>ZmHOX2a(1)   --------->LBD16  --------->MYB55(2) ->HVH21             <---------ETT(1)------->TEIL --------->ARR14(2)    <---------LBD16   <---------DEAR3(1)   tcggtcttcagattacaagattaccgacagattatcacgaacctctcttcgctatcctctttttcctcgtagtctccggttaaagctttacggtggctag  1337400                                         --------->YAB1                                        <------ZmHOX2a(2)                                       <---------ARR11(3)                                       --------->ARR11(3)                                      --------->GLK1(1)                                 <-------TEIL                                 ------->TEIL             <---------WRKY38(1) --------->SPL7          --------->LBD16       --------->SPL1(1)        <---------LBD16        <---------SPL7--------->WOX13(1)    <---------YAB1            <---------ANAC58                                <---------ATHB12  --------->YAB1              <---------ANAC58                                <------ZmHOX2a(2)  <---------ICU4              <---------ANAC46                           ------>NtERF2  <--------HAHB4             --------------->AtSPL3                     --------->ANAC58 --------->ICU4              <---------------AtSPL8               <----------DOF2 <---------YAB1             <------------------SPL14    ---------->DOF2 --------->ANAC46 ------->YAB1<---------WRKY12<---------TOE2(3)   --------->WOX13(1)     --------->ANAC58 ----->ARR11(3)            --------->WRKY12<---------YAB1        <---------ANAC58 ------ARR11(3)            ----------->HVH21<---------ICU4       <---------ANAC58 ----ZmHOX2a(2)          <-------GAMYB<---------GLK1(1) --------->AHL20(2) --------->DEAR3(1)    ---- ----->ARR10----------->HVH21<---------------AtSPL3<---------ATHB12   <---------ALFIN1         <-----   atcatcattatccggtgaacgagagagggttgacgtacggagatcatcattcaatcaataaaacgatgctttccacgccgatcaatggatgaaacgatgc  1337500                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                         <---------YAB1                                                       <---------ICU4                                                       --------->YAB1                                                    --------->YAB1                                                    <---------ICU4                               <------ZmHOX2a(2)   <---------YAB1                      <---------ARR14(2)          --------->ARR11(3)                      <---------GLK1(2)           <---------ARR11(3)                      --------->ARR14(2)         --------->YAB1                   --------->ANAC55(2)          <---------YAB1                               --------      --------->WOX13(1)   --------->ETT(1)     --------->ICU4                   --------->AHL20(2) ----->ZAT18       <---------ANAC55(2)       --------->ICU4                      <---------AHL20(2) ----ZAT18        <---------LBD16 <-----------RAV1(1) <---------YAB1        <---------YAB1   --------   gctctgatcaatctaactcttacggattgtcggatcatgttgcagagatgatgatcatcatcatcgaattagagagttttgattttatttctctcaagga  1337600                                         ----------->GT1                                     ---------->DOF2                                 --------->ANAC58                                 --------->ANAC46                                 --------->ANAC58                          <---------ARR14(2)                                                        <                          --------->ARR14(2)         XXXXXXXXXXXXXXXXXXXXXXX>MIR829.1            <---                          <---------ARR11(1)      <------MYB46(1)         --------->ANAC46      <----                         <---------ARR14(1)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------MYB52(1)                         <---------CCA1(2)        <------MYB83            --------->ANAC58     <-----                       <---------ANAC58  <---------ZAT6        <---------ATHB12      <---------MYB46(3)                       <---------ANAC58 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    xxxxxxxxxxxxxxxxxxxx ->ANAC58   --------->DAG2--------->GLK1(2)      --------->MYB59          --------->ANAC58     <----- ->ANAC58  ---------->DOF2------->TEIL--------->DAG2XXXXXXXXXXXXXXXXXXXX>MIR845A---------->DOF2<-----   agaaagaattagaaaaagcgagagagcgtatctataagcaaaagtgttaattaggtctaatcccaatcgatggaacacacaatagagccgttggagtcgg  1337700      --------->ANAC55(2) ---------YAB1             <-------TEIL ------MYB52(1)           ------------------------>ANAC81 ---GAMYB               ----------->GT1                        ------>ZmHOX2a(1) ----DEAR3(2)          --------->DAG2               --------->At4g35610 xx>smallRNA(fl3)    ---------->DOF2  ---------->DOF2       <-----------GT1                <---------YAB1 -MYB83     --------->AHL20(2)  ----------->GT1     <---------At4g35610              <---------AHL20(2) -MYB46(1)  <---------AHL20(2)---------->DOF2   <-----------HVH21              <----------DOF2   ----   ttatgtttacttattttaatacaaaaaggttcaaaagaaaaaaaggaaattgtcatctcaatttcctattctttcaatgggctttattttcttatgaaac  1337800  Previous    Next  AGI:  At3g04854.1    Description:  unknown protein Range:  from: 1337273    to: 1337383    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g04855.1    Description:  unknown protein Range:  from: 1337792    to: 1337926    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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