Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ----------->GT1             --------->ATHB51             --------->ATHB12            --------->ICU4                   ----------->GT1                                     ----            <---------YAB1                 ----------->GT1                                      <----          --------->YAB1                   <----------ID1                                       <----        --------->ANAC58                  ------------------------>ANAC81            --------->MYB52(1)        --------->ANAC58                ---------->DOF2                          <---------TOE2(3)   ccctaaattcaagcataattggaaaaatactaatctagtagcaaaaggagaaaaactcaaatcgagtcaaattgctgaaaattaaggcaacgaagacgat  1335600                                                                  ==============================HOX2a_HOX2a                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                 --------->CCA1(2)                                                                 ===============================HOX2a_HOX2a                        --------->ZAT6                           --------->ARR14(1)                  <---------AHL20(2)                            --------->AGP1                   ----              ------>MYB46(1)                                   --------->ARR14(2)               <--- --------->ANAC58<---------AHL20(2)                             <---------ARR14(2)            ------- --------->ANAC58--------->AHL20(2)                            <---------GLK1(1)            --------- ----->YAB1 <---------MYB59                                    --------->GLK1(1)            <-------- -----YAB1  --------->TOE2(3)                       ---------->DOF2 --------->At4g35610  <------ZmHOX2a(1) --ZmHOX2a(2) ------>MYB83     ----------->GT1  ------->TEIL   --------->At4g35610     <---------TOE2(3)   cataagccccaaaacctaattttataacagtaagagttatatgaattatggacccaaagagtagcagatccgatgaagacgagcgaatttaggaaacatc  1335700                                                                              <--------HAHB4                                                                              <---------ICU4                                                                              --------->ATHB51      <---------ARR14(2)                                                     --------->ICU4      --------->ARR14(2)     --------->AHL20(2)                              <---------YAB1  <-------TEIL      <---------ARR14(2)                                <---------GLK1(2) ----->HSFB2a(2)    --------->ARR14(2)                            --------->At4g35610            <--- ------HSFB2a(2)  <------MYB83                  ----------->GT1   <---------At4g35610<------ZmHOX2a(1) -->ARR11(3)      <------MYB46(1)           <---------TOE2(3)   <------ZmHOX2a(1)  <---------TOE2(3) >HSFC1(2)        <---------DEAR3(2)      ---------->DOF2 <---------TOE2(3)--------->YAB1        ---- -HSFC1(2)       <---------DEAR3(1)    --------->YAB1    ---------->DOF2  <---------YAB1        <----   tagatgcaaattcactgagtcggttctccaaataaaaacaaatataaaggaagaaaaactaaagtaggagcagattatcataattaaggagtgagagagg  1335800                                  --------->ARR14(2)                                  <---------ARR14(2)                           <---------At4g35610                           --------->At4g35610                           --------->GLK1(1)                           <---------GLK1(1)                          <---------ARR14(2)              ------>NtERF2                          --------->ARR14(2)              --------->LBD16                          ----------->ARR10              <---------LBD16                         <------NtERF2                  <---------LBD16                        --------->LBD16               --------->ARR14(2)                       <---------DEAR3(1)         ----------------->AGL1                       <---------ANAC46           ----------------->AG          <---------HSFB2a(2)     <-----------ARR10   <---------ARR14(2)          --------->HSFB2a(2) <-------TEIL      --------->ARR14(2) ------ARR14(2)       <---------LBD16           ------->TEIL   ----------->GT1   <---------MYB46(3) ----->ARR14(2)   --------->MYB52(1)            <---------ARR14(2)       --------->MYB52(1)         - --ZmHOX2a(1)    <---------ARR14(2)            <---------CCA1(2)     <-----------GT1    --------->ANAC46   aacctcgaagttgcagaaggaaacggcggagatgcggttcttatctggtgtatccatttccggcgaggtttatactaactgggtcgttctactccaactt  1335900     --------->LBD16                                                        >>>>>>>>>TBF1    <---------HSFB2a(2)                                         <---------MYB52(1)    --------->HSFB2a(2)                                         <---------ARR14(2)    --------->LBD16                     >>>>>>>>>TBF1         <---------MYB46(3)   <---------LBD16                   >>>>>>>>>TBF1           ------>ZmHOX2a(2)                      <  --------->MYB52(1)              >>>>>>>>>TBF1            <---------ARR14(2)      --------->ALFIN1*TSS ------>NtERF2  <---------------------WRI1              --------->ALFIN1 >>>>>>>>>TBF1   --------->GLK1(1) -------->DEAR3(1)         ---------->DOF2  <----------ID1 --------->ARR14(2)     <------------------   cgcctcccggaaaacaaaaacgaagcactaaaagaagaagaagaagaagacgaagagagtggatcggttactgaagaagaagaaggtggagatttcaatg  1336000                                                                         <---------ALFIN1                                                                       <---------ALFIN1                                                                     --------->TCP15(2)                                                                     --------->TCP16(2)                                                                     --------->TCP23                                                                    --------->PCF2                                                                    <---------ZAT18                                                                    <---------PCF5                                                                    <---------TCP11(2)                                                                    <---------TCP16(1)                                                                    <---------TCP15(1)                                                              --------->ATHB12                                                              <------------ATHB5               --------->LBD16                  <----------DOF2     <---------TCP20      <---------ANAC46                         <---------ANAC58    <-----------TCP11(1)     --------->At4g35610                   <---------ANAC58   --------->ATHB51    --------->ALFIN1                 <---------ANAC58        <---------AHL20(2)            ----------   <------ZmHOX2a(1)                 <---------ANAC58     <-----------------AGL3         ---------->DOF2 --------->ALFIN1                    <---------ANAC46------>ZmHOX2a(1) ----------->RAV1(1)--------->DAG2 ------ZmHOX2a(1)               ---------->DOF2<---------ANAC58<------------CBF--------->AHL20(2) ---WRI1  ---------->DOF2  ----------->GT1 <---------ANAC58  <---------YAB1   --------->AHL20(2)   gaggaggagcgggaaagcgggaaacagtaatgtgaaaagccgtgtgcttgctttcctctctctataattgggcccacacattaaaaaaaaaaaaagtaga  1336100                                                                                    <---------AHL20(2)                                                                                  <---------RVE1(1)                                                                    <---------ARR14(2)         ------              ---------->DOF2                                       --------->ARR14(2)        -------            <---------ZAT6               <---------ANAC58   --------->AHL20(2)   <---------ARR11(3)     <---------AHL20(2)          --------->PCF2      <---------TOE1(3)           <---------GLK1(2)     <---------YAB1        --------->ATHB12          <---------TOE2(3) --------->ANAC46     <-------- ->GT1  <---------YAB1---------->DOF2    <---------ANAC58<----------DOF2         --------->ARR11(3) -   atcgatttttattagtgaaagtgtgaaagtaattgggcccattgggtttgaatttaaggcttttaaatcgtataggcaaactagatttttttttttgtcg  1336200                                                                    <---------HSFB2a(1)                                                                    ------>ZmHOX2a(2)                                                                    ===============HOX2a_HOX2a                                                                   <------ZmHOX2a(2)                                                                   ================HOX2a_HOX2a                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                          <--------HAHB4                                                          --------->ATHB51                                                          -------->HAHB4                                                          <---------ICU4                                                          --------->ATHB12                                                          --------->YAB1                                                          <---------AHL20(2)                                                          -------->ATHB1                                                         <---------ATHB51                                                         <---------YAB1          --------->TOE2(3)                                                         --------->ICU4        --------->ICU4                                                       <--------ATHB1         <---------GLK1(1)                 <---------ZAT18                       --------->YAB1         --------->GLK1(1)                 --------->ZAT18                       --------->ATHB51     <------ZmHOX2a(1)       --------->ANAC58                                <--------HAHB4    --------->HSFB2a(2)       --------->AtLEC2                                <---------ICU4<----------DOF2       --------->ANAC46                               --------->ICU4--------->HSFB2a(1)       --------->ANAC58                               <---------ATHB51   <---------HSFB2a(2)  <------ --->ETT(1)      --------->ZAT14               <---------ANAC58   --------->ARR11(3)          ------- --->ID1         <---------ZAT14            <<<<<<<<<<GT-3b <---------YAB1--------->LBD16     <------ ---RAV1(1)--------->MYB52(1)<-----------------AG     <---------ATHB12   <---------LBD16     -------- -------->AHL20(2)          --------->MYB52(1) <---------ANAC58   <---------ARR11(3)---------->DOF2<-   gattaattcaagcaaacggtgcacaatgactaacaaatttggctatttttcttgcaataattattagggatctttccaggaattcttaaagaacattata  1336300                                    --------->DOF5.7(2)                                    <---------MYB52(1)                                   <-------GAMYB                                ------>NtERF2                                --------->LBD16                               --------->DEAR3(1)                               --------->ANAC46                            --------->ARR14(2)                                             <---------YAB1                      ------>ZmHOX2a(2)                                         <---------AHL20(2)                     <------ZmHOX2a(2)                                      <---------AHL20(2)                     --------->GLK1(1)                                     <---------ARR11(3)                     <---------GLK1(1)                                     <---------AHL20(2)                    --------->ARR11(3)                                     --------->AHL20(2)                    <---------ARR14(3)                                     <---------AHL20(1)    ---- ---AHL20(2)        <---------ARR11(3)                                     --------->ARR11(3)    ---- -->AHL20(1)        <---------ARR14(2)                                     --------->AHL20(1)    ---- ---AHL20(1)        --------->ARR14(2)  <---------HSFB2a(2)       --------->ANAC46    ----------->GT1 ->AHL20(2)         --------->ARR14(3)  --------->HSFB2a(2)       <----------ID1--------->AHL20(2) ----------GT1 <---------LBD16<---------LBD16      --------->TOE2(3)      --------->AHL20(2)   <-----   ttcacccttcttcaatatgggggatctccatctccgccgttaccagaacaaaacattattttgtgtttacgacaaaatatatttaaacatgttatattta  1336400         --------->MYB52(1)       --------->TOE2(3)       --------->TOE1(2)       --------->TOE2(2)     ------>MYB83     -------->P     ------>MYB46(1)    --------->MYB55(1)   --------->AtMYB61   <---------MYB46(2)                                                                              <-   --------->DEAR3(1)                                                                      --------->AHL20(2)   <---------MYB111(1)                                                                     <---------AHL20(2)   --------->MYB46(3)                   -------->HAHB4                                    <---------AHL20(2)   <---------MYB111(2)  --------->ARR11(3)                                                --------->AHL20(2) ------>NtERF2          <---------ARR11(3)                                           --------->AHL20(2) ----->ANAC58       --------->ANAC58    <---------ICU4                               <---------AHL20(2) ----->ANAC58       --------->ANAC58   --------->ICU4       <----------DOF2    <-----------GT1   ---- ----->ANAC46     --------->MYB52(1) --------->YAB1      <-----------GT1--------->AHL20(2)--------->AHL20(1) ------GT1  <----------ID1--------->TOE2(3)        <-------TEIL         <---------AHL20(2)<---------AHL20(1)   cgacaccaacctaagagacaaaacgaaatcttaagaacataataatgcataagttcgttttactttcaacgtattaaaattttacatttaaatttatttg  1336500  Previous    Next  AGI:  At3g04850.1    Description:  tesmin/TSO1-like CXC domain-containing protein. similar to tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G14770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68781.1); contains InterPro domain Tesmin/TSO1-like, CXC (InterPro:IPR005172) Range:  from: 1331952    to: 1335999    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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