Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->AHL20(2)                                     ----------->RAV1(1)                                   --------->MYB46(3)                                  <------NtERF2                                 ------>NtERF2                                --------->DEAR3(1)                                <---------ATERF1(2)                                --------->ATERF1(2)                                --------->RAP2.6(2)                <---------ANAC58                               <---------RAP2.6(2)      --------->O2                              <---------At5g28300       <---------TGA1a                  --------->ZAT6                             <-----------GT1            <---------O2                <---------ANAC58           <-------TEIL===========================================bZIP_DOF          <---------ANAC58      <---------AHL20(2) <---------AHL20(2)             --------->TGA1a       ------>ZmHOX2a(1)    <---------AHL20(2) <----------DOF2  --------->TOE2(3)          <---------ANAC58<-------TEIL   gtatatataaaaattcatgctggttctttatttgccgcccaacataaattagttggacaagtgagaaggccttgctactcctacatgcgttacactatta  1293400                                                                       <---------YAB1                                        <---------ARR11(3)          ------>ZmHOX2a(1)                                        --------->ARR11(3)         <---------ANAC58                                       <---------GLK1(2)           <---------ANAC58                                    <---------MYB59                <---------ANAC46                                  --------->SPL7                <---------ARR14(2)                                <---------SPL7                  --------->ARR14(2)           <---------ANAC58    --------->TOE2(1)         <---------ANAC58             --------->ANAC46           <---------ANAC58    --------->TOE1(1)         <---------ANAC46           <-----------GT1     <---------YAB1           --------------->AtSPL8     <---------ANAC58      ----------->GT1   <-----------GT1        <-----------GT1 --------->TOE2(3)   <---------MYB46(3) <---------YAB1     <   cagtattactattgcttcatagaaaaataaacctcgtaccaaaatctcaaataagtgtttcttgtggttccttatgaaaaattgttatacactattacag  1293500                           --------->ANAC46                           --------->ANAC58                          <---------LBD16             <---------YAB1            <---------MYB52(1)                      --------->YAB1        <---------At5g28300--------->ANAC58  --------->ORA47(1)                 --------->TOE2(3)       <-----------GT1  <---------GLK1(1)   --------->DEAR3(1)            --------->ARR14(2)  <---------YAB1        --------->GLK1(1) <---------At5g28300       <-----------GT1    --------->ANAC46 -----------GT1     --------->ETT(1)     <-----------GT1     --------->ANAC46 <-------TEIL   tattactattcaccgtttattgtcggaactcggaacaacgttttcaccgtccaattgttatacacactattcaccatatatacattaatacatcacacat  1293600                                                                                     --------->YAB1                          <---------YAB1                                             <---------ICU4                         <---------TOE2(3)                <-------GAMYB          <---------AHL20(2)                        --------->YAB1                   ----------->GT1        --------->AHL20(1)                     --------->TOE2(3)                  <---------YAB1          --------->AHL20(2)                 --------->ZAT18                      <---------ICU4            <---------AHL20(1)                 --------->ZAT14                      -------->HAHB4            <---------AHL20(2)                 <---------ZAT18                      --------->YAB1         <--------ATHB1                 <---------ZAT14                     <---------ATHB12        --------->ATHB51                <---------ZAT6                       --------->ICU4          <---------ICU4               <---------------AtSPL8                <---------YAB1          --------->AHL20(2)               --------------->AtSPL8               <---------TOE2(3)        <---------AHL20(2)              <---------ANAC46                     --------->YAB1         --------->YAB1            --------->ZAT14        ----------->GT1<---------AHL20(2)     --------->AHL20(2)       <--            --------->ZAT18  <---------YAB1  --------->TOE2(3)           <---------AHL20(2)       <--            <---------ZAT14--------->YAB1    <---------DAG2             --------->AHL20(2)    <------           --------->ALFIN1-------->HAHB4 <-----------GT1<---------MYB46(3) --------->ICU4    <------   cttctacttaagagtgtagtgtacattaatgataattttgtaattaacctttttaatgatggttaaaatgtctaattaataatttaatagtgacttactt  1293700     ----------->GT1                            <-------GAMYB  <---------ANAC46                              ----------->GT1  <---------ANAC55(1)                          <---------MYB46(3)  <---------O2          --------->ANAC46       ----------->GT1  <---------bZIP60(2)   --------->ANAC58     <---------MYB52(1)  <---------ANAC55(2)   --------->ANAC58    <---------RAP2.6(3)  <---------ANAC58    ----------->RAV1(1)   ------>NtERF2  <---------ANAC58    <---------ALFIN1     <---------ANAC58 <-----------------------TaNAC69(2)        <---------ANAC46 -------ANAC58     --------->ANAC58        <---------ANAC58 -------ANAC58     --------->ANAC58     <-----------GT1               <---------At4g35610 ---ANAC58         --------->PCF2   <---------GLK1(2)                 --------->At4g35610 <---------MYB52(1) ---ANAC58---------->DOF2           --------->ARR11(3)   ---------->DOF2   --------->GLK1(1)   <-----   gcttacgtggataaaagagagaccccacacaaaaattagattttgccgtctgttaaaaaaaaaggcttcttcagccgatttctccaaaaatcgttttttt  1293800                    <---------WRKY38(1)                <---------ANAC58             ----------->HVH21                <---------ANAC58           ----------->RAV1(2)             *TSS   <---------WRKY12  --------->HSFB2a(1)           <---------DAG2           <---------At4g35610   --------->SPL7                <-----------GT1          XXXXXXXXXXXXXXXXXXXX>MIR858<-----------ARR10        <-----------GT1                      <-       <-----------GT1        <---------ANAC58             --------->YAB1<-----------GT1         <--- -------------------ANAC81    <---------ANAC58      <----------DOF2 <----------DOF2              ----   ttttttttttttcatcttccgttcaacgttttgcgttcgactcttccctgacccctttcaattttaaaccctttttctctgtctctcttgtccgaatcaa  1293900            --------->DAG2           ---------->DOF2       --------------->AGL15       <---------------AGL15       <---------HSFB2a(2)       --------->HSFB2a(2)      <---------ANAC46      <---------ANAC58                                                                         <-----      <---------ANAC58                                                                   <------ZmHOX2a(2)      <-----------------AGL2                                                            --------->ARR11(3)      <-----------------AGL1                                                            <---------ARR14(3)      <-----------------AG                                                              --------->ARR14(2)     --------->At4g35610                    <------NtERF2                               --------->ARR14(3)    <---------MYB46(3)                    --------->ALFIN1                              <---------ARR11(3)    --------->MYB55(2)           ---------->ID1                                         <---------ARR14(2)   <--------P--------->DAG2    <-----------RAV1(1)--------->At4g35610              --------->TOE1(2)  <-------GAMYB             <----------DOF2<---------MYB46(3)                   <---------ARR14(2)  <---------MYB52(1)     ---------->ID1   <---------ANAC46                      ------->TEIL  ------>ZmHOX2a(1) --------->LBD16     <----------DOF2<------NtERF2 <---------At4g35610  <---------AHL20(2)--------->GLK1(1) --------LBD16     <---------HSFC1(2)   <---------MYB46(3)             --------->AHL20(2)<---------GLK1(1) ------ARR14(2)    --------->HSFC1(2)<---------ANAC46            --------->TOE2(3)--------->YAB1   -- ----->ARR14(2)    <---------HSFB2a(1) --------->ALFIN1 <------ZmHOX2a(1)  <-----------GT1------>ZmHOX2a(2)   atccggttgctggaaaagggaagctttgtgcttttgtcgtcgtggtgggggaagcggaggataagaaccctaattttttacgaatcgtgagatctcctaa  1294000              --------->ALFIN1                                                                <------NtERF2              <---------ANAC46                                                               --------              <---------DEAR3(1)                                    <---------GLK1(1)        --------             --------->ATERF1(1)                                    --------->GLK1(1)       ---------            <---------MYB46(3)                           --------->MYB46(3)                 ---------            <------MYB46(1)                  <------NtERF2     --------->At5g28300         --------->RAP2.3(1)           <---------DEAR3(1)              <---------ANAC46  <---------DEAR3(1)     <------MYB83-----           --------->ALFIN1               <---------LBD16--------->DEAR3(2)         <---------MYB46(3)           --------->MYB55(2)       --------->LBD16      <---------MYB52(2)         <------MYB46(1)           <---------AtMYB61        ------>NtERF2       --------->At4g35610        <---------AtMYB61<     <---------ARR14(2)            --------->ANAC46     <---------At4g35610       <--------P---------     --------->ARR14(2)           <---------LBD16      ----------->RAV1(1)      ===================== ----TOE1(2)<------MYB83 ---------->ID1 <---------DEAR3(1)------->GAMYB    <---------At4g35610<------ ------->GLK1(2)<------NtERF2<----------DOF2--------->LBD16--------->MYB52(1)   <-----------RAV1(1)<-   gtttctgaatcgggtggtggcgattttgtttctttctccgcgatggcggaattagggcaacagacggtggatttctctgctcttgttggtcgagccgcag  1294100 ->At4g35610 ->LBD16 >RAP2.3(2) -->RAV1(1) ---->At4g35610      --------->ARR11(3) ---------ARR14(2)  <------ZmHOX2a(1)                  <---------YAB1 >DEAR3(1)        <---------TOE2(3)                <----------DOF2 =====RAV<----------DOF2   <---------ANAC46  --------->ANAC46 -----RAV1(2)<----------DOF2                <---------LBD16                             <-----------RAV1(1) -----ZmHOX2a(1)  <---------TOE1(3)       --------->ETT(2)                       ------>ZmHOX2a(1)   aggaatcgttcctttcttttaaggaacttgtggataagtctaagtcgacggagctttctgatactgagaagaaggttagcctccttaagtatgtcgctaa  1294200                 --------->LBD16        <---------ANAC46                 ------>NtERF2          <---------ZAT6                <---------ALFIN1       <-----------------------TaNAC69(2)                --------->DEAR3(1)    ----------->GT1            <---------HSFC1(2)     <---------O2          --------->ARR14(2)       --------->O2                                                 <----          <---------ARR14(2)  --------->ANAC58                                               <-------          <---------GLK1(2)   --------->ANAC58                                              <--------     --------->MYB52(1)       --------->ANAC46                                   <---------TOE1(3)   <---------At4g35610   <---------ZAT18----------->GT1 <----------DOF2          <---------TOE2(3)   --------->At4g35610---------->DOF2--------->ALFIN1 ---------->ID1            <-----------GT1------   gactcagcaacggatgctccgcctcaatgccctcgccaagtggtgtaaacaggtttgtctttctctgtttctcgctaagtattaacgttttgggtctgtg  1294300  Previous    Next  AGI:  At3g04740.1    Description:  SWP (STRUWWELPETER). similar to hypothetical protein OsJ_027532 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44049.1); similar to hypothetical protein OsI_029662 [Oryza sativa (indica cultivar-group)] (GB:EAZ08430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43073.1); contains InterPro domain Mediator complex, subunit MED14 (InterPro:IPR013947) Range:  from: 1293813    to: 1300720    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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