Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                ------->TEIL                                                             ------>MYB46(1)                                                           <---------MYB46(2)                                                           <---------MYB59                <---------ARR14(2)                 ------>MYB83                 <---------YAB1         ---------->DOF2                           ------>MYB46(1)           <---------AHL20(2)     <---------YAB1                              <---------MYB59--------->TOE1(2)   --------->YAB1                                --------->TOE2(3)           <---------YAB1  <---------ATHB12                         --------->YAB1<---------At5g28300<---------AHL20(1) -->STY1(2)     --------->ARR14(2)<---------At5g28300   <-----------GT1     --------->AHL20(2) ---STY1(2)  <---------ANAC46 <---------ICU4  <-----------GT1------>MYB83   --------->YAB1   agaaatcatgttaaagcgtatacatctctacataatgaccgcctagtataacctaattttaccgaacctagaagacaatattattagttgaaatagagat  1290200                        <---------MYB46(3)                       <---------AtMYB61                      <---------MYB52(1)                     <------MYB83                     <------MYB46(1)                    <---------MYB46(3)                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                    --------->MYB55(2)                   <---------ANAC46                   <---------ANAC58                   <---------ANAC58              <---------ANAC58                 --------->ARR14(2)                                <---              <---------ANAC58                 <---------ARR14(2)                               -----          <---------ANAC58                ------>ZmHOX2a(1)   <----------DOF2        <------NtERF2          <---------ANAC58   <-----------GT1   <---------GLK1(2)                   --------->DEAR3(1)   tgaaattcagtttcttacttggctggtggttttacgaccttctccttcatattctctaaatcgactttggaaactgaatccatagccgtcgatgaaagat  1290300                                         <---------YAB1                                        <---------AHL20(1)                                       --------->ATHB51                                       --------->AHL20(2)                                      <---------YAB1                                      --------->ICU4                                      <---------MYB52(1)                                          ---                        --------->ARR11(3)                                                       <---                        --------->ARR14(2)                                   --------->LBD16     <---                        <---------ARR14(2)                                  --------->ANAC46 <-------        ===========================HOX2a_HOX2a                             <---------LBD16   <-------        <------ZmHOX2a(2)          <---------YAB1                         <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <---------ARR11(3)        <-----------GT1                        <---------ALFIN1     --------       --------->ARR11(3)     <----------DOF2                   --------->LBD16<--------P    -------- ----TEIL               <---------ARR11(3)       --------->ANAC46<---------MYB52(1)    <-----------ARR10 ---->GLK1(2)------->GAMYB  ------>ZmHOX2a(1)<-----------GT1 ------>ZmHOX2a(1)<---------MYB52(1) <---   tcagtttgagatcaacagtctcagaaaatcctcttttaccattattttttccagccatttctcctccgtgattcccacccggtagccctaatctcagctc  1290400                                                                   <---------ETT(2)                                                                  <------ZmHOX2a(2)                                      <---------YAB1          =========================HOX2a_HOX2a                                   <---------YAB1       <------MYB46(1)                                 --------->ATHB12       <---------At4g35610           <---------AHL20(2)    -------->HAHB4         --------->ANAC55(2)    <------NtERF2                <---------ICU4         <------MYB83 ------>LBD16                    --------->YAB1         <---------ANAC55(2) ------ANAC46                   <---------YAB1         --------->MYB59 ------ANAC58          --------->HSFB2a(2)             --------->MYB111(1)                   <------- --ZAT2    --------->AHL20(2)   --------->ICU4         --------->MYB111(2)          --------->GLK1(2) --At4g35610           <---------HSFB2a(2)             --------->MYB46(2)          <---------ARR14(2) ->ZAT2   --------->AHL20(2)--------->AHL20(2)       <---------MYB52(1)            <---------GLK1(2) ->At4g35610--------->WOX13(1)--------->YAB1----------->GT1   ------>ZmHOX2a(2) <------ZmHOX2a(1) ------ANAC58  --------->YAB1<---------AHL20(2)  --------->ICU4   =====================HOX2a_HOX2a   cgtggcctcaaaattaatcatatttctcgatataatgattatcaacgagtaattagttaggtgatccgatcgacaacgagtaggagattcttcggcttct  1290500                                                                                              -------                                                                                             --------                                                                                   <---------ZAT14       <----------DOF2    <---------AHL20(2)                                       --------->REM1(2)      <------------------------ANAC81                          --------->CCA1(2)   --------->ZAT14--- ---DOF2        <----------DOF2<---------LBD16               --------->CCA1(2)  <---------ANAC46 ----   agggtttttcttttagttcttttgatatttttttggggaactaaaacgtttgaagagagagagagatagggggatgtgagatgtgtgtagagaaacaaag  1290600                                                                                          <---------ZAT2                         <---------AHL20(2)                                           <---------MYB46(3)                         --------->AHL20(2)                                          --------->ALFIN1                        --------->AHL20(2)                                         --------->ZAT2                   <---------ANAC46                   --------->ICU4               <---------ZAT2  --                   ----------->GT1                    <---------YAB1               <---------O2    <-                --------->ALFIN1             <---------ICU4                        --------->O2    <-            ------>ZmHOX2a(2)                --------->ATHB12                    <-----------RAV1(2)<          <---------ARR14(2)                <---------YAB1                 <---------REM1(1)       -- -->MYB52(1)<---------ANAC46           <------------CBF  <---------YAB1    <-----------RAV1(1)     <- -->DOF2*TSS<---------ANAC58 <---------AHL20(2)     <------ZmHOX2a(1)      <---------bZIP60(2)    <-- -------->GT1 <---------ANAC46 ----------->TBP<------------CBF             ==================RAV<---- ------->GT1<---------ANAC58 --------->AHL20(2)   <---------TOE2(3)  <---------DEAR3(1)   --------->ZAT2   ggctaaatattggatcgtgtgtggtataaaattatatatggaattgatcattgaggatgattatttgaacggaggtgatgttgccaggtggatgctggga  1290700                                                 <------NtERF2              --------->ANAC58                                                <-----------TGA1            --------->ANAC58          --------->SPL7                       <---------ANAC58         ------>NtERF2         <---------MYB52(1)                    <---------TGA2(1)      <---------ANAC58        <---------SPL7                         <---------ANAC58       <---------ANAC46   <------MYB83                                <---------ANAC46       <---------ANAC58   <------MYB46(1)                             --------->TGA2(1) <--------ATHB1 <--------P                         <-----------HVH21            --------->ATHB12 ------->MYB55(2)                  --------->TGA2(1)             <---------ICU4 --------MYB46(3)                  <---------TGA2(1)             --------->ATHB51 -----MYB83             <------NtERF2          --------->bZIP60(1)    <---------RAP2.6(2) ---------ANAC46      --------->ETT(1)         <---------bZIP60(1)   <---------LBD16   ---------->DOF2 ------->ATHB12       <---------ANAC46  --------->ANAC58        <---------YAB1     <---------ZAT18 -----MYB46(1)        <---------LBD16   --------->ANAC58        --------->ICU4    --------->ALFIN1 -------AtMYB61 --------->ALFIN1   <---------bZIP60(1)    ------>ZmHOX2a(1) --------->ANAC46 --------CBF <------ZmHOX2a(1)     --------->bZIP60(1)    --------->LBD16--------->WRKY18(1)   ttggttggaccgtaaggagtgttgtcgggagagaatgatgtcacgaatggcgtcattttcctgagaataattgcggccaagccagtgggcaaaggccaac  1290800                                           <---------AHL20(1)                                           --------->AHL20(2)                       --------->ANAC58                                           <---------AHL20(2)                <-----------GT1                                           --------->AHL20(1)             <---------ICU4                                          --------->AHL20(2)             <---------YAB1                                    --------->MYB46(3)                   --------->ICU4                                   --------->ANAC46                    <---------ICU4                                   --------->ANAC58                    --------->YAB1                                   --------->ANAC58                    <--------HAHB4        --------                                --------->MYB46(3)   --------->YAB1   <---------ATHB12     ----------                     --------->REM1(2)    <---------AHL20(2)      <---------YAB1--------->ZAT6             <----------DOF2  <-----------GT1       <---------ATHB12 ------->TEIL   --------->ANAC58   ttggcacagtctctccttttctgtgtcgaatttatccacccaaaataaattctaatcaaacttgaaatatgaatcatttttaccactcgcataaaaaggt  1290900                                          <---------GLK1(1)                                          --------->CCA1(2)                                         --------->ARR11(3)                               <---------LBD16                               <---------At5g28300                               --------->RAP2.6(3)                 --------->TOE2(3)       --------->ARR14(2)                 <----------DOF2--------->ANAC46                                                 ----           <---------------AtSPL8        <---------ARR11(3)                                    ------ ->DAG2    --------------->AtSPL8    ---------->DOF2                     ----------->GT1       ------ >DOF2 <----------DOF2        <-----------GT1              --------->AHL20(2)                 -------   atacctcttctttttagtactttaatcagtttttacggcaaaagatattcgagtcttttgaaaaaatatcaaaaacagaaatatcaatttgatgaaaaat  1291000                                                                   <---------AHL20(2)                                                                  <---------YAB1  ----------->GT1     ----------->GT1               <---------AHL20(2)            <---------AHL20(2)   ---------->DOF2                 --------->AHL20(2)          <---------YAB1    <---------AtMYB61 ----->YAB1                     --------->AHL20(1)    <---------ANAC46    <---------WOX13(1) --->AHL20(2)                   <---------AHL20(1)    --------->ETT(1) --------->AHL20(2) --->AHL20(1)        ---------->DOF2    ---------->DOF2 <------NtERF2  <---------AHL20(2) -->YAB1    ---------->DOF2    --------->AHL20(2)  <-----------RAV1(1)--------->AHL20(2)   aatagcaaagaaaaaaaagaagaaaaagactaaatatataaataaagagtgttttgtcggagattatttttatttaattggtgatggtttatatgaaaat  1291100  Previous    Next  AGI:  At3g04730.1    Description:  IAA16 (indoleacetic acid-induced protein 16); transcription factor. Identical to Auxin-responsive protein IAA16 (IAA16) [Arabidopsis Thaliana] (GB:O24407); similar to IAA7 (AUXIN RESISTANT 2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G23050.1); similar to indoleacetic acid-induced protein 16 [Brassica rapa] (GB:ABV89663.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 1288618    to: 1290608    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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