Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------ARR14(2)                                                                       <------ZmHOX2a(1)                                                        ------->TEIL  <---------YAB1                                 <----------DOF2        --------->ARR14(2)                           <---------ARR14(2)           <---------ARR11(1)                           --------->ARR11(3)           <---------ARR14(2)                           <---------GLK1(2)            --------->GLK1(2)        <----------ID1                           <---------ARR11(3)          <---------ARR14(1)      --------->ANAC58                         ----------->ARR10             <---------CCA1(2)--------->ARR14(2)                  --------->ANAC58         --------->CCA1(2)        --------->YAB1   <---------YAB1 --------->ANAC58       --------->CCA1(2) <----------DOF2   ---------->DOF2 --MYB52(1)  <---------YAB1--------->ARR14(2) <------ZmHOX2a(1) <---------YAB1 --------->ANAC58 -----   gcagtcttattgaagattataagcactcagattttcttttgagagataggaagaagcgaatcttttacaattaggattcgaaagaaacaaaaaacaacta  1277700                                                                  ----------->GT1                          <-----------RAV1(1)                     <----------ID1                   <-                   ----------->GT1                              ---------->DOF2                 -----                 --------->CCA1(2)                        ---------->DOF2                     ------- ------>GT1 ---------->DOF2                        ------------------------>ANAC81       --------->At4g35610   gaaaattttggagaaaaagagatgaaaattgtggctctgtatataactcacaagatgagagaaagaaaaagaaaaacacctcttgttcataagctgtaat  1277800                                            <---------AHL20(2)                                            --------->AHL20(2)                                            --------->AHL20(1)                                            <---------AHL20(1)                                         ----------->GT1    <---------HSFB2a(2)                                         --------->YAB1     --------->HSFB2a(2)                                     ----------->GT1     <-----------GT1        ----------->GT1 --------ANAC46              ------>ZmHOX2a(2)       <---------DAG2      --------->TOE2(3) ---->ICU4                 --------->ARR11(3)        <----------DOF2  <---------GLK1(2) -->YAB1    ---------->DOF2<---------ARR11(3)      ------->TEIL<---------ARR11(3)   gatgtatacaaaaaaaaagattacaatatgatcttggattggataataaaatgaacttttttctagataatcgattcttaaactgaaaataagcccattt  1277900                                                                    <---------ANAC46                                                                    <---------ANAC58                                                                    <---------ANAC58              --------->YAB1                                   --------->ATHB12             ---------      --------->TOE2(3)                                        -------->ATHB1              --------->AHL20(1)      --------->TOE1(3)                                        --------->ATHB51           --------->AHL20(2)    <---------TOE2(3)                                         <---------YAB1          --------->AHL20(2)    <---------TOE1(3)                                     --------->ANAC55(2)      ----------->GT1   --------->MYB52(1)                <-----------RAV1(2)  <---------ANAC55(2)     --------->ICU4 ------>ZmHOX2a(2)         --------->CCA1(2)       <-----------GT1 <---------MYB46(3) <---------AHL20(2)   tgatctaacgttagaatgaaaatgaagagatttgagaagtcagggtgtattttttacaaaacgtattattgggtgtattttgtaatagttaaatatatga  1278000                                                                                   ------>MYB46(1)                                                                                   ------>MYB83                                                                                   --------->At4g35610                                                                                  --------->MYB52(1)                                                                                 --------->AtMYB61                                                                                 --------->MYB46(3)                                                                                --------->MYB46(3)                                                                              ------>NtERF2                   <---------AHL20(2)                                        --------->DEAR3(1)                 <---------YAB1                 --------->HSFC1(2)      ------>NtERF2              --------->AHL20(1)                --------->HSFB2a(1)    ----------->HVH21              <---------AHL20(2)                <---------HSFC1(2)--------->HSFC1(2)             ----              --------->AHL20(2)                <---------HSFB2a(1)  <---------ATERF1(1)       ------        <-------TEIL---------->DOF2           <---------GLK1(2)   --------->HSFB2a(1)         <------       --------->CCA1(2)                   <---------HSFB2a(2)    <---------HSFB2a(1)------->GAMYB    <---------TOE2(3)   --------->ARR11(3) --------->HSFB2a(2)    <---------HSFC1(2) *TSS    <------- >CCA1(2)     <---------AHL20(1)          <---------LBD16   --------->TOE1(2)<---------ETT(1)--------   gggtctaagattcaaatttattaaaagataaccaaaaaaaaacctctggaatcttcttaaaacctagaagcctccgactccgaccaactgaaaaattaaa  1278100                                                                   --------->ANAC46                                                                   --------->ANAC58            ------       <----------DOF2                                             --------->ANAC58            ------  ---------->DOF2                                                --------->MYB52(1)            ------ ----->DAG2                                                     <---------SPL7                ------>MYB46(1) ---->DOF2             --------->YAB1                          <---------MYB52(2) <---------GLK1(1) ---AHL20(2)          <---------YAB1                    <---------MYB52(1)        --------->GLK1(1) --AHL20(2)       --------->GLK1(1)                 --------->MYB52(1)  <---------MYB59       ------>MYB83 ->AHL20(2)       <---------GLK1(1)               --------->MYB46(3)    <---------MYB52(2)   <-------   aggcaaaagctttttttcagatttctgataatcagacagacagacacaaacaaacaccggtatcgacgaacggaactaactccgatatccaaaacccact  1278200       --------->ANAC58       --------->ANAC58                ------>ZmHOX2a(1)       <---------MYB52(2)            ----------->RAV1(2) --->ANAC58              --------->At4g35610 --->ANAC46             <---------ARR14(2)                    --------->ARR14(2)                   -- --->ANAC58             --------->ARR14(2)          <---------ZAT18   <----------DOF2             <-- --ALFIN1    --------->MYB52(1)      <---------At4g35610      <---------ARR14(2)             ------->TEIL   ccaagtttcacgaacgaagggcttagtatctgccatggctcctgatgcttctactgctcttgcaggtatgctcttttctatattttagaatgatgtatcg  1278300               <---------ANAC58               <---------ANAC46               <---------ANAC55(2)  --------->ATHB12                   ------>ZmHOX2a(2)              <-----------------------TaNAC69(2)                     --------->ARR11(3)             <         <---------YAB1          <---------ANAC58           --------->At4g35610              <-------      <----------DOF2            <---------ANAC58           <---------At4g35610   <---------HSFC1(2)- ---->ZmHOX2a(2)             <---------GLK1(2) <---------MYB52(1)    <---------ARR11(3)      <------- -------GLK1(1)<---------ANAC58  --------->TOE2(3)      <----------DOF2==============================   atctctgtcttttgaatgcgtatgaactatagattccttgatgggctctcttagttttctttagctgaattgatcttatggtgaagtttcgattttttct  1278400               <<<<<<<<<TBF1         <----------DOF2      ------>NtERF2   <---------At4g35610   <---------ZAT2                                                         ----------->GT1   --------->At4g35610                                                 <<<<<<<ZML2   --------->ZAT2                                                   --------->HSFB2a(2)  <-----------RAV1(1)                               <---------RAP2.6(2)<---------AGP1 ---------At4g35610                           <---------TOE2(3) --------->ICU4 ----GT1<---------DAG2                       --------->YAB1   <---------------AGL15 ----->ZmHOX2a(1)                         <----------DOF2    ----------------->AGL1 -----------------ANAC81             <---------MYB52(1)      ----------------->AGL2           <------ ======HOX2a_HOX2a   <----------DOF2<-------GAMYB   <---------ANAC46<---------HSFB2a(2)    <---------YAB1   tcctctgctgccttttcttcttccttttgtgaaattttcgttggctataatgtttcggctatggccattactagaactgtagaaactcaaatactaattg  1278500                                                                    <---------YAB1                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)              <------MYB46(1)                                      --------->AHL20(1)              <------MYB83                                         <---------AHL20(1)        <---------AHL20(2)                                        --------->YAB1        --------->AHL20(2)                                        <---------ICU4               <-----      --------->TOE2(3)                                          <---------YAB1  <---------ANAC58      <----------DOF2              <---------TOE2(3)     ------->TEIL  <---------YAB1     <----------DOF2 ---WOX13(1) --------->MYB59 <---------YAB1      <--------P      --------->ICU4  <---------ANAC58   aaaattttctttaatttggtataagtagattagaattgaagttgacacttggtagtttgaatctctaattataatttttgttttcgtttcatctttggat  1278600  Previous    Next  AGI:  At3g04700.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65016.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62670.1); contains InterPro domain Protein of unknown function DUF1685 (InterPro:IPR012881) Range:  from: 1276674    to: 1277830    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g04710.1    Description:  ankyrin repeat family protein. similar to stress-inducible protein, putative [Arabidopsis thaliana] (TAIR:AT4G12400.1); similar to stress-inducible protein, putative [Arabidopsis thaliana] (TAIR:AT4G12400.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN69337.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); contains InterPro domain Ankyrin (InterPro:IPR002110); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 1278085    to: 1281124    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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