Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ARR11(3)                                                                                 --------->YAB1                                                                         ------>ZmHOX2a(2)          <---------ICU4                                                <------ZmHOX2a(2)         <---------YAB1                                                --------->ARR11(3)         --------->ICU4                                                <---------ARR11(3)       --------->YAB1                                                  <---------AGP1--------->GLK1(2)     --------->GLK1(2)              >>>>>>>>>MYB98                    --------->RVE1(1) ->HSFB2a(2) --------->YAB1        --------->MYB52(1)    --------->TOE2(3)      --------->AHL20(2) --HSFB2a(2) <---------ICU4 ---------->DOF2    --------->ARR11(3)  ---------->DOF2   --------->ARR11(3)   ccaagagaatcataatcaacacagaaactaaaaagcctaacaaaatacagaacttgcaacctatataacaaaagatctcaaaataaaaatctaaaccaga  1267900                                         <---------ANAC46                                         ----------->GT1                                         <---------ANAC58                                         <------NtERF2                                    --------->YAB1                                         <---------ANAC58                                <---------ATHB12                                        ------>NtERF2--------->LBD16                     --------->MYB46(3)                   <-------TEIL        <---------ANAC46                       <------ZmHOX2a(1)               <---------------AtSPL8  <---------ANAC58               <-----------GT1   ------>MYB46(1)          ---------->DOF2              <---------ANAC58            --------->YAB1       ------>MYB83     ----------->GT1                --------->ANAC46--------->HSFB2a(2)   --------->TOE1(2)       ---     --------->AtLEC2      <------ZmHOX2a(2)        <---------HSFB2a(2) --------->ZAT6 --------->WOX13(1)   ttaagacatgaaaaaagagagtacattagatcaaatccaaggcgcgtgaaaaatccagaactcaatctctaataaccctaggaagaaaccaatcaccatg  1268000                                                                                      ------->GAMYB                                                                                    <---------REM1(2)                                                                             <----------DOF2                  --------->ANAC46                        ---------->DOF2   =========================HOX2a_HOX2a                  --------->ANAC58                       ==========================HOX2a_HOX2a         <---------ATHB12                                =========================HOX2a_HOX2a       ------>MYB46(1)                                   ------>ZmHOX2a(1)  ------>ZmHOX2a(2)       <       ------>MYB83                         <---------HSFB2a(1)            <------ZmHOX2a(2)       --     --------->AtMYB61 --------->DAG2       --------->HSFC1(2)             ==========================HOX2a_HOX2a     <---------MYB111(1)       ----------->GT1         --------->YAB1     <---------ARR11(3)  <------ZmHOX2a(1)    --------->ANAC46  ---------->DOF2       --------->HSFB2a(1)           --------->AGP1      ------- ------>GLK1(1)   --------->ANAC58          <---------HSFC1(2)            --------->ARR11(3) --------   agttccaccaaatcacttccaaggaaaagtgctaagtaaaaatcgaaactccctcaatcctaaagctaaaaaatgagatctttctcaacacacagaggat  1268100                                                --------->LBD16                                          <---------HSFB2a(1)                    <----------DOF2     <---------At4g35610                  --------->HSFC1(2)                    ------>ZmHOX2a(2)     --------->At4g35610            ---------->DOF2                            <------ZmHOX2a(2) ---------ICU4            ---------->DOF2 --------->HSFB2a(1)                  <---------RVE1(1) ------->ICU4      --------->ARR11(3)     <---------HSFC1(2)                  --------->AGP1 <------- ---->GT1          <---------ARR11(3)   <---------GLK1(2)                     --------->ARR11(3) --->GT1      ---------->DOF2    >>>>>>>>>TBF1 --------->LBD16                <---------ARR11(3)  ---   aaaaattagctcatgacaaagggtcttcaaaagaagaagaaagaaactccctgaaaatttagagctagaagaaaaaatgagatctttttgaatacccaga  1268200                                                --------->AHL20(2)               ---------->ID1                         XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B                <---------ANAC58           --------->At4g35610     <------ZmHOX2a(1)       ---------->DOF2     --------->MYB52(2)           <---------At4g35610  --------->CCA1(2)    ---------->DOF2     <---------ANAC58 --HSFB2a(2)             <---------GLK1(1)   <------ZmHOX2a(1)     --------->ARR11(3)        *TSS -------->GT1       <------ZmHOX2a(1)      <---------TOE2(3)       <---------ARR11(3)<----------DOF2   aggtaacaaatttagctcaagaggaagaaatcagataggaaattttaggataaaataaagagaaagaaagatttgtcttgtttgtttctttgtgagagag  1268300                                                            <------NtERF2                                                          --------->ALFIN1                                                        <---------ANAC58                                                        <---------ANAC58                            -                                                       --------->MYB55(2)                           -                                                       <---------MYB46(3)                           <                                                  <----------DOF2                                  --                                                 <---------ANAC58                                  <-                         --------->DAG2     <----------DOF2<---------MYB46(3)  <----------DOF2    ---                        ---------->DOF2 <---------YAB1<---------ANAC46        <---------ANAC46   <---                  ----------->GT1 <---------TOE2(3) <-----------RAV1(1)       <---------ANAC58   ----             ----------->GT1 <-----------HVH21   <---------ANAC58             <---------ANAC58  -----   agagagagatagagatggtgagataaaaaagtgtcaaaggttatgacttttgctttgtgggtggggaagagtttagacttgcttttacttaaaattcccc  1268400   --------->AtMYB61   <---------ALFIN1  --------->MYB46(3) -------->AtMYB61 -------->DEAR3(1) ---------ALFIN1                                                                                   -- ------->MYB46(3)                                                                                ---- --------MYB55(2)                 ---------->DOF2   <----------DOF2                      <<<<<<<<<SARD1 --->NtERF2 <-----------GT1 <-----------GT1     <-----------GT1       <-----------GT1    <<<<<<<<<CBP60g ------ALFIN1            <---------ICU4      <------------------------ANAC81            ------>MYB83< ----->ANAC46        <---------AHL20(2)  <----------DOF2          <---------AHL20(2)    ------>MYB46(1) ---->MYB46(3)       --------->AHL20(2)  <---------DAG2  <-----------GT1              <---------MYB59   caccaccaccatttctacaatttttaaatattaccaaaaacccctttttatttcctttttttcttcatttattcacttctcaaggagaccaaatttcaat  1268500         <----------DOF2                                                                            <      <-----------GT1       <---------TOE2(3) ----------->GT1                                       <     <-----------GT1       ---------->DOF2  <---------LBD16                                     ----- ------->AHL20(2)--------->TOE2(3)          --------->LBD16                                     <---- ----->YAB1    <---------YAB1             <---------LBD16   ------>MYB46(1)            <---------ZAT14 ---------AHL20(2)   ---------->DOF2<---------AHL20(2)      ------>MYB83               --------->ZAT14   tttaaattttcctttttattcttaaaagctaaagttattcaatttctggggaaaataaaaccaaacacaaaaacataagtggaatacagaacagagatgt  1268600                                                                                                  ---                                                                                         <---------DAG2                                                                                 --------->ZAT18  ---                                                                          ------>ZmHOX2a(1)  <-------         <-----------HVH21                                            <---------PCF2   ------>MYB83      <---------TOE1(2)                                               --------->TCP15(1) <----------DOF2  <------NtERF2        ----------->GT1                               <------MYB46(1) <---------MYB59 ---------MYB46(3)   <------ZmHOX2a(1)                               <------MYB83<---------ZAT18<---- ---------DEAR3(1) ------------------------>ANAC81                  <---------MYB46(3) ------>MYB46(1) ---->ALFIN1    <------ZmHOX2a(1)      <---------ZAT18              --------->MYB59  <---------MYB111(1) -----AtMYB61<---------At4g35610 --------->MYB52(1) ---------->DOF2--------->ALFIN1------->TEIL <----   ggtcgtcgcagtttcagaggagaggaagaaaaaaaaaacagagccctctgttaaaaaagagtttcttaggtgggtcctactagtggacctactttatacc  1268700                                                                                               ------                                                                                               <-----                                                    <---------TOE2(3)                         <------                                                  ---------->DOF2                             <------                                                 --------->AHL20(2)                           <------       <---------ANAC46                       =======================================================       <---------ANAC58                       --------->WOX13(1)                              -------       <---------ANAC58                     =========================================================      --------------->AtSPL3                ----------------->AGL3                           <------- --->MYB46(1)                              <---------ARR11(1)                                -------- --->MYB83                  --------->AHL20(2)--------------->AGL15    --------->YAB1     <---------ANAC46 ----GT1                    <---------AHL20(2)<---------------AGL15    --------->TOE2(3) <---------LBD16 -----MYB111(1)         --------->ATHB12  <---------ARR14(1)         ------->TEIL  <---------YAB1 <-- -----MYB59     ----------->GT1  --------->YAB1  <---------AHL20(2) <---------CCA1(2) <----------DOF2   tactgtttttcgtacaaatagaaaattgattaaaatcataaaccgtatcaattaaaggaaattagataatgtatcttaacattttctgattttcggatat  1268800  Previous    Next  AGI:  At3g04670.1    Description:  WRKY39 (WRKY DNA-binding protein 39); transcription factor. Identical to Probable WRKY transcription factor 39 (WRKY39) [Arabidopsis Thaliana] (GB:Q9SR07); similar to WRKY74 (WRKY DNA-binding protein 74), transcription factor [Arabidopsis thaliana] (TAIR:AT5G28650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65015.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 1266301    to: 1268293    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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