Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <----------DOF2                                                            <---------MYB52(1)                                                          <---------ANAC58                                                       <---------MYB52(1)                     ---------->DOF2     --------->TOE2(3)<---------ANAC58 -->ALFIN1     --------->YAB1<----------DOF2         <---------ANAC58 ----------------->ANAC81   <---------ANAC58         <---------ANAC58            <---------ANAC46 -RAV1(2) ----------->GT1   <---------ANAC58      <---------MYB52(1)<----------DOF2             -----   agacagagaagaaggaataaaaacaaagatgctttcttcaaatccataattcgtttcgtttcgtttctttctttttctgtgtgacttacaatttatacac  1261600                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                      <---------CCA1(2)                                                    <---------ANAC55(2)                                              ----------->HVH21                                           <-----------ARR10                              --------->ICU4                                           --------->GLK1(2)                              <---------YAB1                                           <---------ARR11(3)               <-----------GT1              --------->O2                 --------->ARR14(2)    --------->ARR14(2)   --------->ARR11(3)              <---------O2                 <---------ARR14(2)    <---------ARR14(2) --------->ARR11(3)          <---------At5g28300              --------->ARR11(3)  --------->ARR11(3)   <---------ARR11(3)         <-----------GT1                  <---------GLK1(1)    <---------ARR11(3)   --------->AHL20(1)  ----------->GT1                         --------->RVE1(1)    <---------AHL20(1)   <---------AHL20(1) ---->ANAC46------->GAMYB        <---------YAB1     --------->ANAC55(2)  <---------ICU4  *TSS   cgaattgtttataaccgcgtgactatatgactattctaatttgaatatctgaacgcgtattttaatatatccgactaattacaaaatatatcatgtttag  1261700                                   <---------At4g35610                         <-----------GT1                                   --------->At4g35610                   ------------>CBF                                <------NtERF2                          <-----------GT1                                <---------At4g35610                  <----------TaMYB80                               <---------DEAR3(2)                   ---------->TaMYB80                              <---------DEAR3(1)                    --------->ARR14(2)                             --------->RAP2.6(3)                    <---------ARR14(2)                            <-----------HVH21                       ------->TEIL  --------->TOE2(3)                           ------>ZmHOX2a(1)    ---------->DOF2  <---------ANAC55(2)            <----  <---------ICU4           <-----------RAV1(1)<---------YAB1     --------->ANAC55(2)   ------------>CBF   ataactattactatctgagacccattttcctgtcggcttctgagaaatatcaaagatggatttgtatacgtatataccaattttccataaacaatgctac  1261800              --------->ANAC58              --------->ANAC58      --------->ATHB12            --------->MYB52(1)   <---------AtLEC2       <---------DOF5.7(2)       --------->YAB1       ---------->DOF2         --------->AtLEC2                                <----------DOF2     --------->DOF5.7(2)       <---------YAB1           --------->YAB1      --------->GLK1(2)<------ZmHOX2a(1)    --------->TOE1(3)        --------->YAB1            <---------YAB1       <---------ARR11(3)    --------->TOE2(3)       <---------ATHB12         --------->YAB1         --------->ARR11(3)   <---------ANAC46       --------->WOX13(1)     <---------YAB1         --------->YAB1     <---------TOE2(3) -------RAV1(2)         <---------YAB1        <----------DOF2          <---------YAB1      <---------TOE1(3)   aggtttcgttaaagaaacgaaatgttatcaatcatgcatgatttcatacttttgattatcatatagttttgttatgaaaatctttagtagattaaggaaa  1261900                                                                             <---------ALFIN1       -                                                                             --------->ZAT6        --                    ----------->GT1                   ---------->DOF2   --------->At4g35610       ---             ---------->DOF2  --------->At5g28300----------->GT1        <---------At4g35610       <--    --------->AHL20(2)       ----------->GT1 --------->LBD16--------->MYB52(1)                   <---    <---------AHL20(2)--------->At5g28300   <---------HSFB2a(2)     --------->GLK1(2)     *TSS   ----   --------->AHL20(2)----------->GT1        --------->HSFB2a(2)  <---------GLK1(2)        <---------AHL20(2)   tagaatttaaaaaaaaaaagagagggtaaaacagtaattttgtgttccgaaagtttaaaagataacagataatccgctcacactcgagcaaatttatcgg  1262000 -------->DEAR3(1) ------->ATERF1(1) --->NtERF2                   <----------DOF2                                              --------->LBD16 -------ATERF1(1)             --------->TOE2(3)                                          ------->GAMYB ------ARR14(2)         <---------ALFIN1                     --------->MYB46(3)        --------->ANAC58 ----->ARR14(2)<<<<<<<<<<<<<<<<<LFY         <------------------------ANAC81            --------->ANAC58   agcctccctccaaaattcaacaatggccacttctttaatgtctctgtcttcttcatttcttcaacctctgaaactcaaaaccctagcacaacccagaaac  1262100                                                                                 --------->TOE1(3)                                                                                 --------->TOE2(3)                                                                              --------->GLK1(1)                                                                             --------->ARR14(2)                                                                             <---------ARR14(2)                                                                         <---------At4g35610  -------                                                                         --------->At4g35610 --------                                                                        ----------->RAV1(1)  <-------                                                                      <---------At4g35610  --------->LBD16                                                                      --------->At4g35610 -----------                                                                      --------->ZAT2      <---------HSFB2a(2)                       --------->YAB1                                 <---------ZAT2      <---------HSFC1(1)            ----------->RAV1(1)                                      ----------->RAV1(1)  --------->HSFC1(1)           --------->AtMYB61    --------->TOE1(2)                    --------->ANAC46     --------->HSFB2a(2)          --------->MYB46(3)    --------->TOE2(2)       <--------P  <-----------RAV1(2)  <-----------         -------->P    <---------ICU4           <<<<<<<<<<<<<<<<<LFY================RAV  ------------   actgacttatctaccaccagaaaaatcataacaacatgcgattcccaaaacaacactggtaagtcaaaccccagcagcagaaaccctaatttccagaaac  1262200                                                                              <---------ALFIN1                                                                             <---------ZAT14        <                                                                             --------->ABI4(1)      -        ===================================HOX2a_HOX2a                       <---------SPL7         -        ------>ZmHOX2a(1)                 --------->ANAC58                   --------->ZAT14        -   <---------HSFC1(2)                     --------->ANAC58                  --------->DEAR3(1)      <   --------->HSFB2a(1)                 ------>ZmHOX2a(1)                   --------->ANAC46         <   --------->HSFC1(2)               <------ZmHOX2a(2)                     <---------At5g28300       -  <-----------ARR10                --------->ARR14(2)                    <-----------GT1          <-- -->MYB52(1)                       <---------ARR14(2)                  <-----------HVH21         ---- ->ARR14(2)                      ----------->ARR10                    =============================== --ARR14(2)              <---------HSFB2a(2)                    ----------->GT1          <---------At4g35610 ---->AGL15              --------->HSFC1(1)                     --------->ANAC58    <---------GLK1(1) ------AGL1              --------->HSFB2a(2)                    --------->ANAC58    --------->GLK1(1) ----->AGL1              <---------HSFC1(1)           <-----------GT1 <----------DOF2    --------->At4g35610   ggcgaaactcctccaagtatgggacttctagaaggtcgatcctcaagaaatcgtttttacaagagcaagttactttcaccgcacgggtctctgatgaccc  1262300          --------->MYB52(1)         --------->ATHB51         --------->YAB1        --------->ICU4      --------->WOX13(1) ------->MYC2 <-------MYC3 <-------MYC2 <-------PIF5 ------->MYC3                         <---------At4g35610 ------->PIF5                    <------MYB46(1) ------->MYC4                    <------MYB83 <-------MYC4                   --------->MYB59                  <------NtERF2 ---------TGA1a              <---------ARR14(2)                <---------ANAC46 -------->PIF3(3)           <------NtERF2                      <---------ANAC58 -------->ANAC46           --------->LBD16                     <---------ANAC58 -------->TGA1a           <---------ANAC58                    <------NtERF2 ---------O2              <---------ANAC58                 <-------PIF5 ---------PIF3(3)         <---------ANAC46       --------->TOE1(2) -------->O2    <---------MYB46(3)  <---------DEAR3(1) <---------ZAT2  <---------ZAT14 -------ALFIN1 --------->ALFIN1 <---------AtMYB61<---------LBD16<---------SPL7 ------------>PIF3(2)    <---------LBD16       ------->TEIL------->PIF5--------->ZAT14    <-------TEIL =========bZIP_DOF  <------ZmHOX2a(1) <---------LBD16  <---------At4g35610               --------->ARR14(2)   ccacgtggcaattatcggtggaggaatggcgggtttggtctgcgcattgaacctggaagctcgtggcgtccagtccacagttttcgatacggttcgtcaa  1262400                      <---------TOE2(3)                                                          ----                     ---------->DOF2                                  <-----------GT1     --------->ZAT14            <---------ARR14(2)                                <---------ANAC58            <---------ZAT18            --------->ARR14(2)            ----------->GT1     <---------ANAC46       <---------At5g28300            --------->GLK1(2)             <---------ANAC46    <---------ANAC58      <-----------GT1            ------->TEIL    <---------ANAC46              <----------DOF2 <----------DOF2 <---------ZAT14   tttagataatttcgaatctgaattaaagtttcttagaatgggttctgtgaaatttgtggtctttgggtgtttttgcctttgtatattcacagttcacttc  1262500  Previous    Next  AGI:  At3g04640.1    Description:  glycine-rich protein Range:  from: 1260912    to: 1261689    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g04650.1    Description:  oxidoreductase. similar to amine oxidase-related [Arabidopsis thaliana] (TAIR:AT1G56000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65010.1); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076) Range:  from: 1261990    to: 1264628    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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