Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                 ----                                            ------>NtERF2                                        ----                                            --------->ABI4(1)                                    ----                                           ------->GAMYB                                        -----                                           --------->DEAR3(1)         --------->DEAR3(1) --------->LBD16                    --------->LBD16        --------->DREB2C(2)        --------->RAP2.6(2)------>NtERF2                    ------>NtERF2          <---------ALFIN1         ------>NtERF2--------->SPL7 -----                   --------->ANAC46       --------->ORA47(2)        --------->LBD16      --------->At4g35610                   --------->DEAR3(1)    <---------ATERF1(1)        --------->At4g35610 --------->DEAR3(1)                 <---------ATERF1(1)    <---------ALFIN1         <---------ATERF1(1)   --------->SPL7        <---------GLK1(1)      <<<<<<<ZML2--------->MYB46(3)     ------>ZmHOX2a(1)    <---------ATERF1(1)       <<<<<<<ZML2 <---------ALFIN1     --------->AtMYB61       <---------ALFIN1--------->ATERF1(1) -    <---------HSFB2a(2)     --------->HSFB2a(2)         <---------GLK1(1)     <---------ANAC58-------    --------->HSFB2a(2)     <---------HSFB2a(2)     --------->HSFB2a(2)  --------->ARR14(2)--------->DEAR3(1) ---->ZmHOX2a(1) ------>ZmHOX2a(1)     --------->MYB46(3)    <---------ALFIN1 <---------ANAC58<------ ->ZmHOX2a(1)   <---------ALFIN1      ------>ZmHOX2a(1)<<<<<<<ZML2 --------->DEAR3(1)<---------ALFIN1 ----ALFIN1  <---------ALFIN1  <---------ARR11(3)   <---------HSFB2a(2)  <---------ARR14(2)--------->RAP2.6(2)   cctctgctagaactccctcctccgcctctgctagaacttcctccaccgcctctgctagaactccctcctccgccgaaactgcgtccccctccgccgaaac  1261300                            <----------DOF2                           <---------DAG2                           <----------DOF2                         ------>NtERF2                        --------->DREB2C(2)                        --------->RAP2.3(3)                        --------->RAP2.6(2)                        --------->RAP2.3(2)                        --------->DEAR3(1)                        --------->RRTF1(2)                        <---------ALFIN1                        --------->RRTF1(3)                       --------->RAP2.6(1)                       --------->ATERF1(1)                       --------->RRTF1(1)                                       <---------MYB52(1)                       --------->DEAR4(2)                                       ----------->RAV1(2)                       --------->RAP2.3(1)                                    --------->DEAR3(1)                      --------->At4g35610                                 ----------->HVH21                      <---------At4g35610                                 --------->TGA2(2)                      --------->LBD16                                    <-----------TGA1                      <---------ATERF1(1)                               --------->ANAC58      --------->AtMYB61--------->ERF1                                   --------->TGA2(1)   <---------ALFIN1   ------>NtERF2                                     <---------ANAC58 <---------ATERF1(1)  --------->ABI4(1)                                 --------->ANAC46 ------>NtERF2       --------->DEAR3(1)                                 --------->ANAC58 -------ATERF1(1)    <---------ALFIN1                                   --------->ANAC55(2) ----->DEAR3(1)      --------->ANAC46                                   <---------bZIP60(1) ----->RAP2.6(2)   ------>ZmHOX2a(1)                  --------->At5g28300<-----------HVH21 --->GAMYB------>NtERF2--------->ORA47(2)    <---------MYB52(1)         <---------TGA2(1) ---->MYB46(3)     <---------ATERF1(1)      <-------GAMYB               --------->bZIP60(1) ---->DEAR3(2)  ------>ZmHOX2a(1)          ----------->GT1              <---------ANAC58 -------->DEAR3(1)<---------ALFIN1         <---------ZAT6               <---------ANAC55(2) -->ARR14(2)   <---------ALFIN1--------->TOE2(3)     ----------->GT1   <-----------STF1 ---ARR14(2) ------>NtERF2<------NtERF2--------->MYB46(3)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   cgcctccacctctgcctcctcctccgccgcctttcttaacaacgactgttaatttcggtaaattggcttcgattacgtcaccgtctggcttcaattctac  1261400                                                                                              -------                                                                                              -------                      <---------ANAC46                                                       <-------PIF5                 <---------ICU4                                                           <----------                 --------->YAB1                                  <---------ANAC46     --------->At4g35610                --------->ICU4                                   --------->O2         <---------At4g35610                <---------YAB1                             ----------->HVH21          <-------GAMYB              --------->YAB1                           ------>ZmHOX2a(2)       <---------REM1(1)             <------ZmHOX2a(2)                        <------ZmHOX2a(2)        --------->ALFIN1            <---------ARR11(3)                       --------->ARR11(3)        ======================            --------->ARR11(3)                       <---------ARR11(3)        <-----------RAV1(1)           --------->GLK1(1) <---------WRKY12        <---------ARR14(2)     --------->ALFIN1 ------->PIF5           <---------GLK1(1)<------ZmHOX2a(2)        --------->ARR14(2) ---------->DOF2   <---------ANAC46   ttcttgaaacgggagatcatcatggtttggatcaacgaaggctaaacttgttgaagatcgcgagaccgcgtgagcaaagtggtgttgcagttgcaggtgg  1261500                                                                <----------DOF2                                                            <---------MYB52(1)                                                          <---------ANAC58                                                       <---------MYB52(1) -->ALFIN1           ---------->DOF2     --------->TOE2(3)<---------ANAC58 ----------------->ANAC81   <---------ANAC58         <---------ANAC58 -RAV1(2)      --------->YAB1<----------DOF2         <---------ANAC58            <---------ANAC46 =RAV     ----------->GT1   <---------ANAC58      <---------MYB52(1)<----------DOF2             -----   agacagagaagaaggaataaaaacaaagatgctttcttcaaatccataattcgtttcgtttcgtttctttctttttctgtgtgacttacaatttatacac  1261600                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                      <---------CCA1(2)                                                    <---------ANAC55(2)                                              ----------->HVH21                                           <---------ARR14(2)                             --------->ICU4                                           --------->ARR14(2)                             <---------YAB1                                           <-----------ARR10                <-----------GT1              <---------O2                 --------->GLK1(2)     <---------ARR14(2)   --------->ARR11(3)              --------->O2                 --------->ARR11(3)    --------->ARR14(2) --------->AHL20(1)          <---------At5g28300              <---------ARR11(3)  --------->ARR11(3)   --------->ARR11(3)         <-----------GT1                  --------->RVE1(1)    <---------AHL20(1)   <---------ARR11(3)  ----------->GT1                         <---------GLK1(1)    <---------ARR11(3)   <---------AHL20(1) ---->ANAC46------->GAMYB        <---------YAB1     --------->ANAC55(2)  <---------ICU4  *TSS   cgaattgtttataaccgcgtgactatatgactattctaatttgaatatctgaacgcgtattttaatatatccgactaattacaaaatatatcatgtttag  1261700                                   <---------At4g35610                         <-----------GT1                                   --------->At4g35610                   ------------>CBF                                <------NtERF2                          <-----------GT1                                <---------At4g35610                  <----------TaMYB80                               <---------DEAR3(2)                   <---------ARR14(2)                              <---------DEAR3(1)                    --------->ARR14(2)                             --------->RAP2.6(3)                    ------->TEIL  --------->TOE2(3)                            <-----------HVH21                       ---------->TaMYB80                           <-----------RAV1(1)  ---------->DOF2  <---------ANAC55(2)            <----  <---------ICU4           ------>ZmHOX2a(1)  <---------YAB1     --------->ANAC55(2)   ------------>CBF   ataactattactatctgagacccattttcctgtcggcttctgagaaatatcaaagatggatttgtatacgtatataccaattttccataaacaatgctac  1261800              --------->ANAC58              --------->ANAC58      --------->ATHB12            --------->MYB52(1)   <---------AtLEC2       <---------DOF5.7(2)       --------->YAB1       ---------->DOF2         --------->AtLEC2                                <----------DOF2     --------->DOF5.7(2)       <---------YAB1           --------->YAB1      <---------ARR11(3)    --------->TOE1(3)        --------->YAB1            <---------YAB1       --------->ARR11(3)    --------->TOE2(3)       <---------ATHB12         --------->YAB1         --------->GLK1(2)<------ZmHOX2a(1)   <---------ANAC46       --------->WOX13(1)     <---------YAB1         --------->YAB1     <---------TOE1(3) -------RAV1(2)         <---------YAB1        <----------DOF2          <---------YAB1      <---------TOE2(3)   aggtttcgttaaagaaacgaaatgttatcaatcatgcatgatttcatacttttgattatcatatagttttgttatgaaaatctttagtagattaaggaaa  1261900                                                                             --------->ZAT6         -                                                                             <---------ALFIN1      --                    ----------->GT1                   ---------->DOF2   --------->At4g35610       <--             ---------->DOF2  --------->At5g28300----------->GT1        <---------At4g35610       ---    <---------AHL20(2)       ----------->GT1 --------->LBD16--------->MYB52(1)                   ----    --------->AHL20(2)--------->At5g28300   <---------HSFB2a(2)     --------->GLK1(2)     <---------AHL20(2)   --------->AHL20(2)----------->GT1        --------->HSFB2a(2)  <---------GLK1(2)        *TSS   <---   tagaatttaaaaaaaaaaagagagggtaaaacagtaattttgtgttccgaaagtttaaaagataacagataatccgctcacactcgagcaaatttatcgg  1262000 -------->DEAR3(1) ------->ATERF1(1) -------ATERF1(1)             --------->TOE2(3)                                            --------->LBD16 --->NtERF2                   <----------DOF2                                            ------->GAMYB ----->ARR14(2)         <---------ALFIN1                     --------->MYB46(3)        --------->ANAC58 ------ARR14(2)<<<<<<<<<<<<<<<<<LFY         <------------------------ANAC81            --------->ANAC58   agcctccctccaaaattcaacaatggccacttctttaatgtctctgtcttcttcatttcttcaacctctgaaactcaaaaccctagcacaacccagaaac  1262100                                                                                 --------->TOE1(3)                                                                                 --------->TOE2(3)                                                                              --------->GLK1(1)                                                                             <---------ARR14(2)                                                                             --------->ARR14(2)                                                                         <---------At4g35610  -------                                                                         --------->At4g35610 --------                                                                        ----------->RAV1(1)  <-------                                                                      <---------ZAT2       --------->LBD16                                                                      --------->At4g35610 <---------HSFB2a(2)                                                                      --------->ZAT2      -----------                       --------->YAB1                                 <---------At4g35610 --------->HSFC1(1)            ----------->RAV1(1)                                      ----------->RAV1(1)  --------->HSFB2a(2)           --------->AtMYB61    --------->TOE1(2)                    --------->ANAC46     <---------HSFC1(1)          --------->MYB46(3)    --------->TOE2(2)       <--------P  ================RAV  <-----------         -------->P    <---------ICU4           <<<<<<<<<<<<<<<<<LFY<-----------RAV1(2)  ------------   actgacttatctaccaccagaaaaatcataacaacatgcgattcccaaaacaacactggtaagtcaaaccccagcagcagaaaccctaatttccagaaac  1262200  Previous    Next  AGI:  At3g04640.1    Description:  glycine-rich protein Range:  from: 1260912    to: 1261689    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g04650.1    Description:  oxidoreductase. similar to amine oxidase-related [Arabidopsis thaliana] (TAIR:AT1G56000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65010.1); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076) Range:  from: 1261990    to: 1264628    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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