Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------MYB52(1)                                                                                  --------->RAP2.3(3)                                                                                  ----------->RAV1(1)                                                                                --------->ZAT18    <---------AHL20(2)                                                        --------->SPL7  <---------AHL20(2)                                                          --------->ZAT18 --------AHL20(2)                                                             <---------ZAT18 ------YAB1                                                                 --------->TOE1(2) ------AHL20(2)                                                             <---------SPL7 ----CCA1(1)                      <---------YAB1                           <---------ANAC58 ---ARR11(3)                  --------->TOE2(3)                            ------>ZmHOX2a(2) -->ARR11(3)                  --------->TOE1(3)    --------->AHL20(2)      <---------ANAC58         < -TOE2(2)                     <---------DAG2       <---------AHL20(2)     <------ZmHOX2a(2)       <-- -TOE1(2)                  <-----------GT1 <----------DOF2      ----------->GT1 <---------PCF2    ---   ttattttatattgttttttatattccaaaaaaccttatgattcaactttcgatataaatattgaaatgggaaaacgatcgtgcgccccattagttcaacc  1230600                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                       --------->AHL20(2)                                  <---------------AGL15                                <---------ATHB12                            --------->TOE1(3)                                        --------->WOX13(1)                           --------->ZAT6                                        <-----------GT1                         <-----------GT1                                      --------->TOE2(3)            <---------REM1(2)     --------------->AGL15                       --------->YAB1      <---------ALFIN1--------->YAB1                                          --------->TOE1(3)     <---------ETT(2) <---------ICU4                                         <---------YAB1  ------>NtERF2      <---------ATHB51    <----------ID1                     <---------ARR11(3) ------NtERF2  --------->ANAC46  --------->TOE2(3)                     <---------AHL20(2)       ----- -------DEAR3(1)   --------->WOX13(1)  ---------->DOF2                 --------->AHL20(2) <---------TOE2(3) ------->CDC5<---------ALFIN1--------->DOF5.7(2)        ----------->HVH21   --------->ARR11(3) <-----   tcggcgctcgaccctacacatcaattataacgctaacttaaaaaagacaaaatacaaaatgacaggtttttaaaaaattatcttaaccaattaatattta  1230700                                                                                     <-------TEIL                                                                                 <---------TOE2(1)                                                                                --------->SPL7                                                                              <---------SPL7                                   --------->YAB1                             --------->TOE1(2)                                   --------->AHL20(2)                         --------->TOE2(2)                             --------->YAB1                                 --------------->AtSPL3         <-----------GT1  --------->At4g35610                          --------->ANAC58 ----->DOF2               <---------At4g35610                          --------->ANAC58      <------- ----AHL20(2)         <-----------HVH21                   --------->YAB1    <---------------AtSPL8---   aagccaatttttaacaaatttttctgtcaaatgacaataaaactgcaaaacaatatgtcatcaaaattttcccaagaaaacgtacgatgcatattgtatc  1230800                                         <-----------GT1                                      --------->TGA2(1)                                      --------->bZIP60(1)                                      <---------bZIP60(1)                                    <---------ICU4                                   --------->ICU4                                --------->AHL20(2)                                <---------AHL20(2)                                <---------YAB1                               --------->AHL20(2)                               --------->AHL20(1)             <----------DOF2   <---------AHL20(1) --CCA1(2)   <---------DAG2   --------->YAB1       --------->ANAC58               <---------YAB1----- --->ZmHOX2a(1)   <-----------GT1--------->YAB1    --------->ANAC58         <---------AHL20(2)<------   ctatttgtaatacgactttttttctgtcttaaatataattatgtcactctctcaagccttgagttgagggatttgttttaaatttttatttcttataaac  1230900                                                           --------->At4g35610                <------                                                           <---------At4g35610         <---------ANAC58                                                 <---------YAB1                        <---------ANAC58   --------->ANAC55(2)                          <---------AHL20(2)                 <---------ANAC58   <---------ANAC55(2)                          <-----------TBP                    <---------ANAC58 ---->ZAT6                                      --------->AHL20(2)              <----------DOF2 -----GT1     ------->TEIL   <-------TEIL     <---------YAB1             <----------DOF2    *TSS    <   actatacgtatacatgtatgtgtatcacatatacatatgcttccacttatttttataagttagcttccattacatcttttctctttcttgcttagtatca  1231000                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                         ----------->GT1                                                                                        ------>ZmHOX2a(2)                                                                                       --------->CCA1(2)                                                                                      <---------ARR14(3)                                                                                      <---------ARR11(3)               --------->AHL20(2)                                                     --------->ARR11(3)     <---------ANAC58                                                                 --------->ARR14(2)     <---------ANAC58   <----------DOF2                                 ----------->GT1<------ZmHOX2a(2)     <---------ANAC46  <---------DAG2              ----------->RAV1(1) <---------ZAT6 <---------ARR14(2)    ---------->ID1  <-----------GT1               --------->ANAC46     ----------->GT1--------->ARR14(3) ---YAB1    <----------DOF2          <---------ANAC58               --------->DAG2    --------->AGP1 ----------DOF2<---------AHL20(2)    <---------ANAC58              ---------->DOF2    <---------AGP1   ttctttgtcgtgttcttttaattaaccttttgcaatttgtcttgtgtttctcacaacacaaaaacttgtaaaagtgttaaaaaatcaagatctgaaaaat  1231100        <----------DOF2                                                                             <   <---------At5g28300                        ------>ZmHOX2a(2)                                     -  <-----------GT1                         ------>ZmHOX2a(1)                                         - ----ARR11(3)                       <---------DAG2                                            ------- --->GLK1(2)        <------------------------ANAC81                                       <---------AHL20(2) ------ARR10<---------TOE1(2)<-----------GT1<---------ARR11(3)                            --------->AHL20(2) --->ARR11(3)     <-----------GT1   <----------DOF2 --------->AHL20(2)    <-----------GT1--------->AHL20(2)   cttatcaccgcttctaggtttttcagttttttttcttccttttcctgatctaaattaacttatatttcttagggtttcacttcttgaaacatttaatcag  1231200                                                                                         ============                                                                                <------NtERF2                                                                               --------->ABI4(1)                                                                              --------->DEAR3(1)                                                                              --------->RAP2.3(2)                                                                              --------->RAP2.3(3)                                                                             --------->RAP2.3(1)                                                                             --------->ORA47(2)                                                                             --------->ERF1                                                                             --------->ATERF1(1)                                                                             <------NtERF2                                                                            <---------ATERF1(1)                                                                   --------->ANAC58  --------->ARR14(2)                                                                   --------->ANAC58  <---------ARR14(2)                                                               ------>NtERF2<---------RAP2.3(1)                                                             <---------RAP2.6(2)----------->RAV1(2)                                                            <---------LBD16--------->ANAC46                              --------->GLK1(2)           ------>MYB46(1)  <---------DEAR3(1)                              <---------ARR14(2)          <---------ARR14(2)------>NtERF2============     <-----------GT1          --------->ARR14(2)          ------>MYB83     --------->DEAR3(1) ---------AHL20(2)         <---------ANAC58  <------ZmHOX2a(1)--------->LBD16--------->DEAR4(2) -------->AHL20(2)         <---------ANAC58<xxxxxxxxxxxxxxxxsmallRNA(s)--------->DEAR3(2)------>ZmHOX2a(1) -------->AHL20(1)    <---------AtLEC2 --------->ZAT18------->TEIL<------NtERF2------>NtERF2 -->YAB1           <----------DOF2     --------->ETT(2)   --------->ARR14(2)<---------RRTF1(1)   ----   aattaattaacctctctagggctttcatggcgaatccatggtggacaggacaagtgaacctatccggcctcgaaacgacgccgcctggttcctctcagtt  1231300          ------>ZmHOX2a(2)         <------ZmHOX2a(2)         <---------GLK1(1)         --------->GLK1(1)        --------->ARR14(2)        <---------ARR14(2)        --------->ARR14(3)        <---------ARR11(3)                             --------->YAB1        <---------AGP1                                 <---------ICU4        --------->AGP1 --------->AtLEC2               --------->ICU4        <---------ARR14(3)                          <---------ICU4        <-----------ARR10                           --------->YAB1        --------->ARR11(3)                         --------->ICU4       <---------CCA1(2)  ------->TEIL     --------->TGA1a ===============HOX2a_HOX2a                <---------At4g35610                                ------>NtERF2 ================HOX2a_HOX2a               --------->At4g35610                               -------- ------>DOF2 <---------ALFIN1            <-----------RAV1(2) --------->AtMYB61             ------->GAMYB   aaagaaaccagatctccacatctccatgaacatggccatggactcaggtcacaataatcatcaccatcaccaagaagtcgataacaacaacaacgacgac  1231400                                                                      <-------PIF5                                                                      <-------MYC4                                                                      ------->PIF5                                                                      ------->MYC4                                                                      ------->MYC2                                                                      <-------MYC3                                                                      <-------MYC2                                                                      ------->MYC3                                                                     <---------TGA1a                                                                     ================================                                                                     --------->PIF3(3)                                                                     --------->TGA1a                                                                     --------->O2                                                                  <---------WRKY12                                                                ------>NtERF2                                                                --------->ORA47(1)                                                                <---------SPL7                                                               --------->DEAR3(1)                                                               --------->RAP2.3(2)                                                               --------->RAP2.3(3)                                                              --------->ORA47(2)                                                              <------NtERF2                                                              --------->RAP2.3(1)                                                              --------->ATERF1(1)                                                              --------->DEAR4(2)                                                             <---------ATERF1(1)                                           <-----------------------TaNAC69(2)                                   ----------->HVH21       ------->PIF5                                  ------->MYC3             <-------PIF5                                  <-------PIF5             <-------MYC2                                  ------->PIF5             <-------MYC3                                  <-------MYC3             ------->MYC3                                  <-------MYC2             ------->MYC2--------->ALFIN1                                  ------->MYC2            --------->ANAC58                                 ==========================bZIP_DOF  <---------O2                                 --------->TGA1a          --------->ANAC46                                 <---------ANAC46         <---------ALFIN1                                 <---------TGA1a          --------->ANAC58                                 <---------O2             =====================bZIP_bZIP                                 --------->O2             <---------TGA1a                                 --------->bZIP60(2)   <------NtERF2 <---------PIF3(3)                                 <---------ANAC55(2) --------->PCF2<---------ALFIN1                               ------------->DYT1    --------->RAP2.3(3)                           ------->PIF5    <------NtERF2<---------ALFIN1            <---------MYB46(3)                   --------->ATERF1(1)     --------------->AtSPL3<----------------PIF3(2)              --------->ALFIN1 <---------ALFIN1 ---------->DOF2<---------ANAC46  <---------At4g35610            <---------ANAC58--------->ANAC58    ====================bZIP_DOF     --------->ZAT2            <---------ANAC46--------->ANAC46    ===============================bZIP_DOF            <---------ANAC58--------->ANAC58<---------ANAC46 ------>NtERF2       <---------ZAT2           <-----------------------TaNAC69(2)--------->LBD16--------->ANAC46    ------>ZmHOX2a(1)   - ->DEAR3(1)--------->ATHB12<-------PIF5 <------ZmHOX2a(1) --------->TGA1a   <---------SPL7     ------   gatagagacaacttgagtggagacgaccacgagccacgtgaaggagccgtagaagcccccacgcgccgtccacgtggacgtcctgctggttccaagaaca  1231500  Previous    Next  AGI:  At3g04570.1    Description:  DNA-binding protein-related. similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT4G14465.1); similar to putative DNA-binding protein [Thlaspi caerulescens] (GB:AAY86771.1); contains InterPro domain Predicted AT-hook DNA-binding (InterPro:IPR014476); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175) Range:  from: 1230992    to: 1232334    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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