Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    ---------->DOF2 --------ANAC55(2) --------->GT1                                                          <---------At4g35610 ------->ANAC58                                                  --------->LBD16 ------->ANAC55(1)                                             <---------LBD16 ------->ANAC55(2)                                           --------->ARR11(3) ------->ANAC58                                              --------->ARR14(2) ------->ANAC46                                              <---------ARR14(2) ---TEIL                                                    <---------GLK1(1) --->CCA1(2)                                                --------->RVE1(1)           <---------ARR14(2) ---ARR14(2)           --------->DAG2    --------->ANAC58   --------->CCA1(1)        --------->YAB1 ---GLK1(2)          ---------->DOF2     --------->ANAC58<---------AHL20(2)        --------->ANAC58 -->ARR14(2)<---------ATHB12      <---------YAB1        --------->AHL20(2)         --------->ANAC58   cacgtaaaacaccaatgagatagaaaaggctcaatttttattcaagcccttgttcatattaaatatccggttttagctcatactcaagcatatatagaca  1197000                                                                         --------->ANAC46                                                                        --------->ATERF1(2)                                                                        ------->GAMYB                                                                       --------->DEAR3(2)                                                                       --------->MYB46(3)                                                                      -------->P                                                                      --------->MYB52(1)                                                                    --------->MYB46(3)             --                    <---------ARR11(3)                     --------->ANAC46 ----------->RAV1(1)   <--                    --------->GLK1(2)     <---------At4g35610    --------->YAB1                  <---               --------->At4g35610 <-------TEIL           <---------LBD16--------->LBD16         ----  <---------ZAT14  <---------GLK1(2)      --------->At4g35610   --------->ICU4                   <---   agagtagacagagaagaagcagaatcttacagtttgatacatatagctgtccaattcatcgacggaatcatcaaccggcaacaaattagccaatgccacg  1197100                                  --------->CCA1(2)                           ================================================bZIP_DOF ---->ZmHOX2a(2)           --------->TGA1a                              --------->ANAC58 ----ZmHOX2a(2)            --------->O2                --------->AHL20(2)         --------->LBD16   - ------ARR11(3)            <---------O2       <---------CCA1(2)         --------->ANAC58           -- ----->ARR14(2)            <---------TGA1a<---------ANAC46      <----------DOF2  <---------LBD16  <-- ------ARR14(2) <---------HSFB2a(2)      <-------TEIL  <---------AHL20(2)       <---------LBD16------   atctgtgcaaacacaaatcgagaaaccccaagtgagatttaagttcgtatagcttaaaaaattgaacttttgagaggcaatttcagggaaactctgaaca  1197200                                        <---------ANAC58                                        <---------ANAC55(2)                                        <---------ANAC58                                        --------->ANAC55(2)             --------->YAB1                                       --------------->AtSPL3           <---------ICU4                             --------->LBD16                           <---------YAB1                            <---------TOE2(1)       ----------------->AGL1                            <---------TOE1(1)    ----------->HVH21--------->ANAC46 -------->MYB52(1)       --------->ARR14(2)    --------->O2    <-------TEIL  --------->YAB1     ----- ----->GAMYB             --------->GLK1(2)     <---------O2   --------->CCA1(2)           <----------DOF2 -------MYB52(2)         <---------ARR14(2)--------->SPL7    --------->ARR14(2)     --------->At4g35610 --->MYB46(3)           <---------GLK1(2)  ------->TEIL      <---------ARR14(2) --------->MYB52(1)<--   actaacaaaacttcgaaaattagacagaatccgaggtaagagacgtacctcgtgaccgtattggatacacttcatcatagcataacagctatctttgcct  1197300             --------->ANAC58             --------->ANAC58        --------->ANAC58        --------->ANAC58                                          <-----------RAV1(1)      ---------->DOF2   <----------DOF2                      <-------TEIL                     ------- <---------ATHB12   --------->REM1(1)                  --------->ALFIN1                       ------- ->NtERF2    --------->bZIP60(2)                     <---------ANAC58  <------NtERF2          <<<<<<< -------ALFIN1<---------ALFIN1                       <---------ANAC58<---------ANAC46  ---------->DOF2   ccactcactaaagccacgaccttcatctttctctctctctctctctctcgagttggagtgaggttcttatgtcgtcgaagaaactctgagaaagtcaagt  1197400                                                                        <---------ANAC58                                                                        <---------bZIP60(2)                                                                        <---------ANAC58                                             <---------AHL20(2)      ----------->HVH21                                            --------->AHL20(2)       ----------->TGA1                                     ---------->DOF2         --------->GLK1(2)   *TSS <----------DOF2       --------->AHL20(2)           <------ZmHOX2a(1) -->ANAC58                    <---------AHL20(2)  ---------->DOF2  <---------AtLEC2 -->ANAC58                    --------->AHL20(1)<---------YAB1     --------->YAB1                 <-- <<<WRKY18     <------ZmHOX2a(1)  --------->AHL20(2)     <---------TOE2(3)                 <---------   caatacaaaactttgaaggacgacttaaaaaataaaataaaaagaattttataaaagtttaggaatctagcatgacgtttctacttgttattcgattggc  1197500                                  ----------->GT1                                      <---------GLK1(1)                     <---------ARR11(3)                       <----------DOF2   --------->MYB59         --------->AHL20(2) --------------->AGL15 <---------TOE2(3)          <----------DOF2    <---------AHL20(2)  <----------DOF2    <---------YAB1 <---------GLK1(2) <---------ANAC58      --- ----NtERF2          --------->ARR11(3)   <-----------------AGL2            <---------ANAC58   <----- ---CBF  <---------AHL20(2)----------------->AG   <---------TOE1(3) <-----------GT1    --------->GLK1(1)   ccctatattttttaatttgtcaagttctttctaaattagtaaattctaatttagggtttggaatcttttttttctattgctttaggtcgaaatccatatg  1197600                --------->ANAC58                --------->ANAC58        --------->bZIP60(1)        --------->TGA2(1)        <---------GLK1(1)                         --------->AtMYB61        <---------bZIP60(1)                    --------->ANAC46     <---------YAB1                            --------->ANAC58                             ------->GAMYB   --------->CCA1(2)                           --------->ANAC58                            <---------MYB46(2) ------>CCA1(2) <---------YAB1                ------->GAMYB                                <---------MYB111(2) ----YAB1       --------->ANAC46             <---------ALFIN1            <---------ETT(2)  --------->MYB46(3)   atacgatatgatatcaccacgatagagatgtgtttgtatataaaacaacacaccaaaacgtctgaaacaatcccgtccacaaatgagtattcaactacct  1197700               --------->YAB1              <---------YAB1             --------->AHL20(2)             <---------AHL20(2)            --------->YAB1           <---------YAB1         <---------CCA1(1)     <---------WOX13(1)                                                ----        --------->ARR11(3)  <---------AHL20(2)                                          <---------MYB52(1)        <---------ARR11(3)  --------->AHL20(2)                                         <-------GAMYB     <---------WOX13(1)    --------->AHL20(2)                   <---------TOE2(3)     --------->MYB52(2)   --------->YAB1          <---------AHL20(1)                   <---------YAB1      <---------MYB52(1)  <---------YAB1           <---------AHL20(2)                  <-----------GT1 <-----------GT1   ----   agttatgatagatattataatcttctcaatttaattgctaaactagattagaaaacatttgatattaacattgtattgatataacagttcgttattcaac  1197800          <-----------GT1   <---------ARR11(3)   --------->GLK1(2)      --------->ANAC58               <---------------AGL15   --------->ARR11(3)     --------->ANAC58     <------MYB46(1)                         ---------->DOF2 ----->TOE2(3)       <----------DOF2           <------MYB83              <---------GLK1(2) ----->TOE1(3)    <-----------GT1   <---------ATHB12     --------------->AGL15     <------NtERF2   ctcaaaatcttttttctaaattactttcaaggaaactaatgaataagctaggttttcatctattttgagaaaacagaatattggccgaataaagagatta  1197900  Previous    Next  AGI:  At3g04480.1    Description:  endoribonuclease. similar to unnamed protein product [Vitis vinifera] (GB:CAO44678.1); similar to hypothetical protein OsJ_008513 [Oryza sativa (japonica cultivar-group)] (GB:EAZ25030.1); similar to endoribonuclease L-PSP family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD21586.1); contains InterPro domain Protein of unknown function DUF71, ATP-binding region (InterPro:IPR002761); contains InterPro domain Endoribonuclease L-PSP (InterPro:IPR006175); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); contains InterPro domain Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013 Range:  from: 1193636    to: 1197403    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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