Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->ARR11(3)                                    <---------ARR11(3)    <---------ZAT14                --------->YAB1    --------->ZAT14        <---------At5g28300 ------>SPL7             <-------TEIL  <----------DOF2 -----SPL7             <---------GLK1(2)                                                   <---------AHL20(1) -------->AtSPL3       <---------ARR14(2)       --------->TOE2(3)                          --------->AHL20(1) ---------AtSPL3       --------->ARR14(2)--------->AHL20(2)                                <---------ARR11(3) -------->AtSPL8  -------->P  --------->At5g28300   <-----------GT1              ---------->DOF2 <--- -->MYB59     <---------At4g35610 --------->ICU4<----------DOF2      <-----------GT1       --------->ARR11(3)   tacgactaaactctcgagcttaccagattcactgtaattatcttttaatactttaaactgcttaattagatttacaaaacaataaaaggccaatattttg  1178300                                       <---------MYB52(1)                                      --------->TOE2(3)                                     ----------->GT1                                     --------->ANAC58                        <-------TEIL                                     --------->ANAC46                      ------->MYC3                                     <---------ANAC55(2)                  <---------TGA1a                                     --------->ANAC58                  =============MYC_MYB      <---                                     --------->ANAC55(1)        --------->WOX13(1)               ----                               <------ZmHOX2a(2)            ----------->GT1<-------MYC3    --------->ANAC46                              --------->ARR11(3)            <---------ANAC55(2) <---------MYB52(1)         <---------ARR11(3)   <---------ARR11(3)      --------->AHL20(2)  ===========================         --------->ARR11(3) <---------YAB1      <---------REM1(2)      ------->GAMYB     --------->MYB46(3) ------YAB1      ---------->DOF2   <---------ALFIN1--------->ANAC46  --------->At4g35610 <---------MYB52(2)   tcatagactaatatctagcaaaagaaaattaagatcaacacgttaatttctacacataaaatatgtaaatcaactcacatgcgttattcccacaaaccat  1178400                                     <---------YAB1       --------->ANAC46           <---------YAB1       --------->ANAC58           <---------AHL20(2)       --------->ANAC58        --------->ARR11(3) <----------DOF2               <---------AHL20(1) ----MYC3                      --------->ICU4                                                       < --->MYC3                      <---------ARR11(3)         <----------DOF2        ----------->GT1   <- ===========bZIP_DOF           --------->AHL20(1)<-----------HVH21      <--------ATHB1           <---   atgctttctaagcaaaactactgtatatgtgaaaatattattctaaattttggtcactcactttgttatatgaataattcagtgagtgaaaactatatgg  1178500                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)  <-------GAMYB                                            <---------------AtSPL8   --------->AHL20(2)  <------NtERF2                                        --------->DAG2               <---------AHL20(2) ---------DEAR3(1)                                    ---------->DOF2              --------->AHL20(2) -----NtERF2             ---------->DOF2      --------->MYB52(1)                   <---------AHL20(2) ------DEAR3(1)     ----------->GT1      ---------->DOF2   --------------->AtSPL8------->TEIL--------   aggcggtagtatcgcagaggtttagtttaaagctggagtaagtcaaagtaatggaataaagtatgtactaaatattcgaaatgaatttaataaaacatca  1178600                                                        <---------WOX13(1)                     <-----                                                       <------------CBF                        <-----                                                      --------->ATHB12          --------->TOE1(2)  --                                                     <---------YAB1          <---------ARR14(2)------                                                     --------->ICU4     <---------ANAC46       ------                                    ----------->TBP--------->YAB1   <-------GAMYB         --------->ANAC58    ----------->GT1 ---------->DOF2------->TEIL   --------->ICU4   ----------->GT1        --------->ANAC46 ->TOE2(3)    <------------CBF ------->TEIL     --------->YAB1     <---------MYB46(3)     --------->ANAC58   acaaaatggtagaacttattgacaaagagtatgtatgtatatatacagaagaatgatgattgatgaagatggttaagtggaacttgggattcaaggaaca  1178700                                         ------->GAMYB                                      --------->MYB52(1)                                   --------->ANAC58                                   --------->ANAC46                                   --------->ANAC58                                 --------->MYB46(3) ------>ZmHOX2a(1)               ---------->DOF2 --------->LBD16                ------>MYB83 ----HSFB2a(1)             --------->ANAC46--------->WRKY18(1)                 --------->YAB1 ----ALFIN1  --------->ANAC58   -------->P<-----------HVH21                    <---------ICU4 --------->RAV1(2)         --------->REM1(1)                    <-------TEIL--------->YAB1       ---- --->HSFB2a(1)  ------->TEIL    ------>MYB46(1)               --------->ARR14(2)              ------>ZmHOX2a(1) --->ZAT6    --------->ANAC58 --------->AtMYB61               <---------ARR14(2)        ------>ZmHOX2a(1)   ctcctggcaaatacaacgcatctatgcctacaccaacaagcaacggtcatgcctctcgcatgcagattcaagaaccaagaataatgtctcctcttcctcc  1178800                                                                      <---------ARR14(2)                                                                      <-----------ARR10                                                                      ------->TEIL                                                                      --------->ARR14(2)                                                                      <---------ARR11(3)                                                                ------>ZmHOX2a(2)                                                       <---------ALFIN1                                                   ====================HOX2a_HOX2a                                 <----------DOF2   <------ZmHOX2a(1) <---------CCA1(2)             <- <<<<<<<<<TBF1        <---------ARR11(3)      --------->GLK1(2)<---------GLK1(1)                  <-- -->ZmHOX2a(1)      <---------TOE2(3)        --------->YAB1   <---------ARR11(3)                  <--   ttcttcttctccattcgccttcaaggtatttctctcttttgaatcaagaatcaggaaacaccttgatctctgtatcttctctctctctgggttctgtttt  1178900      <---------DAG2                                                                          -------      <----------DOF2               --------->WRKY38(1)                                  <----------DOF2   <-----------GT1                  --------->WRKY12                               <---------GLK1(2) ---------DOF2                      --------->WRKY45                              <---------ZAT2 -------ANAC58              ------>ZmHOX2a(1)         <---------ANAC58            <---------At4g35610 -------ANAC58            ------>ZmHOX2a(2)           <---------ANAC58            --------->ZAT2   gctttctactttatgctctctgttttgatcctctctcgttgacttccatcactatttcttgactcaagaacaaaaccaagacccagcttctcttttgtct  1179000                             <---------ANAC58                             <---------ANAC58                             <---------AtLEC2              <----------DOF2                         <---------ANAC58           --------->WOX13(1)                         <---------ANAC58  --------->ARR14(2)                       <-----------GT1--------->MYB52(1) --------->At4g35610                   <----------DOF2 --------->YAB1   --------->YAB1                             <----- --->ID1           <---------DAG2 <-------TEIL   --------->TOE2(3)<-----------GT1          ----------   cttcttgttttcttcatggtgctttttacttgcatgttcataacgaattcacattaatcagctttgaataacctgttgatgagacaccattttgtttctt  1179100                                              --------->TOE1(3)                                  ----------->RAV1(1)                                 --------->MYB46(3)                               ----------->RAV1(1)                        <---------ALFIN1  ------->GAMYB                                           ---                    <---------ETT(2)     <---------MYB52(2)                                       <--        <------ZmHOX2a(1)  --------->AtMYB61  --------->TOE2(3)                  <---------ARR11(3) -----DOF2 xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <------ZmHOX2a(1) <----------DOF2           <-- >ID1<---------AtLEC2   --------->AtMYB61--------->MYB46(3)   <----------DOF2    --------->ARR11(3)--   tttttttgcaggaacaacaaggtagaccacctccaacaacacaacaaaccatagcaggaaaactctttagaactcttttcaagggtcttctcttctcaca  1179200  Previous    Next  AGI:  At3g04440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67493.1); contains InterPro domain Protein of unknown function DUF580 (InterPro:IPR007603) Range:  from: 1178724    to: 1180706    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version