Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->MYB52(2)              <------MYB46(1)                ------------>MYB.PH3(2)              <---------ANAC55(2)         <---------MYB52(1)              <------MYB83              <---------MYB46(3)              ----------->GT1       <---------YAB1             --------->MYB59      <---------GLK1(1)             --------->MYB46(2)   --------->GLK1(1)             --------->MYB111(1) <---------ARR14(2) <---------At5g28300            <---------MYB55(1)   --------->ARR14(2)<-----------GT1                   <----------DOF2           <---------MYB52(1)<---------At4g35610<---------MYB46(3)          <----------DOF2       <--           <<<<<<<<<MYB98   <---------ANAC46--------->MYB52(2)         ---------->DOF2       --------   actatggaaatttgttaggtaaatttagttgagcggatatgtttgttagtttgttactgtctaagacttcatcgaaagcttttcttactttcaaattaca  1159000              <---------YAB1        <-------TEIL        ------->TEIL     <---------ANAC58     <---------ANAC46     --------->ANAC55(2)     <---------ANAC58               --------->ZAT6     <---------ANAC55(2)           ------>MYB46(1)    --------------->AtSPL8         ------>MYB83  <---------AHL20(2)    <---------------AtSPL8         -------->P<---------ZAT6    --------------->AtSPL3        ----------->RAV1(1)                         --------->GLK1(2) ----- -----TEIL  <---------ICU4       --------->AtMYB61            --------->MYB52(1)          <---------MYB52(1) ->AHL20(2)--------->ICU4       --------->MYB46(3)---------->DOF2    --------->MYB59 --------->AtMYB61   tacatttacgtacattattattctcttacttcaaaccaacactagtagtattaaaagaattgaataagggttaggctaagaatcagacctccgctagtag  1159100                                                  --------->YAB1                         ----------->GT1                                                  --------->AHL20(2)           --------->TOE2(3)                                             <---------YAB1                   --------->YAB1             >>>>>>>>>MYB98          --------->LBD16                          --------->ATHB12            <-----------GT1         <---------HSFB2a(2)<-----------GT1       <---------ATHB12           <-----------GT1       --------->ARR14(2)   <---------YAB1         --------->ICU4        --       --------->ICU4    <------ZmHOX2a(2) ----------->GT1     <-----------GT1<---------ICU4      --- ---->At4g35610<---------AHL20(1)<---------ARR14(2)--------->AHL20(1)    --------->AHL20(2)     <----   ccgaatgtcatttttaacatattttggatcagccagttccacaaattgtgaataatattactgtttcactatacataaaatcattagaaaattgttaaac  1159200                                                                ------->MYC4                                                                <-------MYC2                                                                ------->MYC3                                                                <-------MYC3                                                                <-------MYC4                                                                ------->PIF5                                                                ------->PIF4                                                                <-------PIF5                                                     <---------ZAT18                                                    <---------ANAC46                                                    <---------ANAC58                                                    <---------ANAC58   ----------->HVH21                                                  <------MYB46(1)     <----------DOF2                       ------>MYB46(1)            <------MYB83  ------->MYC2                       -------->P                <---------AtMYB61--------->ZAT18                       ------>MYB83           --------->ATHB12  <-------PIF4          --------->YAB1                --------->ANAC58       ==================bZIP_DOF        <---------ARR11(3)              --------->ANAC58       --------->TGA1a        --------->ARR11(3)           <------ZmHOX2a(2)         <---------TGA1a       --------->YAB1  ==================================================MYC_MYB       <------ZmHOX2a(1)            <---------ARR11(3)         ==================bZIP_DOF       =====================================HOX2a_HOX2a       ------------>OsbHLH66             <---- ------>P<------ZmHOX2a(2)          --------->ARR11(3)       <------------OsbHLH66              ----- ------>MYB52(1)--------->YAB1  ---------->DOF2 <---------MYB52(1)<---------ZAT18   --------->ANAC46 -----MYB52(2) <-------TEIL     =========================================bZIP_DOF ------>ZmHOX2a(1)<-   taacctctaggatcatattcataccaacaagaagaaaagatcaagaaatcgttggtgtgcttagcacgtgcgcttgacgacctcctaagtcacaactaaa  1159300                                                                                                    -                                                                                    ------------>CBF-                                                                                --------->ARR11(3)  <           <---------ETT(2)                       --------->AtMYB61             <---------ARR11(3)  <   >>>>>>>>>MYB98                      <---------ARR11(3)                     ------->TEIL       ---- -----ARR11(3)              <-------TEIL        -------->P                  <<<<<<<<<EIN3--------->AHL20(2) ---->ARR11(3)        --------->ETT(2) --------->GLK1(2)               ------------>CBF <---------ATHB12 ---------DOF2    --------->ALFIN1     <-----------ARR10              >>>>>>>>>>>>>>>>>LFY   --------   tctttaacatatgtagacaagtggtagacatacgtagacaaaatctaatctaccacaacttccctctccattcaccaatgtatatattcaatgaattaaa  1159400  --------->ARR11(3)  <---------ARR11(3) <---------CCA1(2)                                          --------->ANAC58 -------->AHL20(1)                                          --------->ANAC58 -------->ARR11(3)                               ------>ZmHOX2a(2)             --------->YAB1 ---------ARR11(3)                               ===============HOX2a_HOX2a    <---------ICU4 ---------AHL20(1)                      --------->ZAT18     --------->ANAC46  --------->ICU4 ----->AHL20(2)                --------->YAB1  <---------ARR11(3)             <---------ATHB12 ->AHL20(2) <---------ANAC46 *TSS       <---------ZAT18  ------>ZmHOX2a(1)    <---------YAB1        -   aatatatctctcttccctgtagttttgactcaaacatggttgtccacttgatctctctcctcacacaaaccctagccctaatcattctgtctcttccctc  1159500                                                                                          --------->ARR11(3)                                                                                    ----------->RAV1(1)                                                                                   --------->REM1(1)                                                                                   --------->MYB46(3)                                                                                 ----------->RAV1(1)                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                       --------------->AGL15                                                            --------->ANAC58  --------->ANAC46                           <---------ALFIN1                 --------->ANAC46 --------->DAG2           ----------------------->TaNAC69(2)               --------->ANAC58---------->DOF2      --------->ZAT6    --------->ANAC46             --------->ATHB12  ------>ZmHOX2a(1)  <---------ARR11(3)      <---------ALFIN1  --------->ANAC58           <------ZmHOX2a(2)   <---------------AGL15 -------->YAB1          --------->ANAC58           ===========================HOX2a_HOX2a<---------GLK1(2)   tatcatcaacacttctcaacttgattacgacactcttgttttcaaacaatgcgatccattggacgcaaacatcctccaaaaagcaacaacaaaatctcca  1159600                                --------->ANAC46                           --------->ZAT18                           <---------ZAT18         --------->ANAC58                           <---------ZAT14         --------->ANAC55(2)                           --------->ZAT14         --------->ANAC58                        <---------ANAC58       <---------ANAC58     --------->GLK1(2)                        <---------ANAC58       <---------ANAC58     <---------ARR14(2)                  <----------DOF2    <----------DOF2                --------->ARR14(2)             --------->GLK1(2)  --------->ANAC58   <---------ANAC55(2)  ------>ZmHOX2a(1)            <---------GLK1(2)   --------->ANAC58   --------->ANAC46<---------GLK1(2)         --------->YAB1 <---------ANAC46    <----------DOF2     --------->YAB1                      <   aattactcgaatcagaatctctttcttcgtgcacaagccctttcttctttcttacgcaaactcgaatcagaatcctctcgatctaaattcttgaagactc  1159700                                                                ------>ZmHOX2a(2)                                                               --------->At4g35610                                                               --------->CCA1(2)                                                               <------ZmHOX2a(2)                              <---------HSFC1(2)              --------->ARR14(2)                              <---------HSFB2a(1)             --------->ARR14(3)                              --------->HSFC1(2)              --------->ARR11(3)         <---------ANAC46                              <------MYB46(1)                 --------->AGP1          ------>ZmHOX2a(2)                              <---------MYB46(3)              <---------ARR14(2)    <---------ARR11(3)                              <------MYB83                    <---------ARR11(3)<------MYB46(1)                --------->ANAC58                <---------GLK1(2)           <-----------RAV1(1)       ----------->GT1        --------->HSFB2a(1)            <---------GLK1(1)  <------MYB83       <-  <------MYB83  --------->ANAC58              ----------->ARR10<---------At4g35610  --------->ARR11(3)  <------MYB46(1)       <---------LBD16<---------ZAT14      ----------->ARR10  <---------AtMYB61   <- --------P      --------->ANAC46       --------->ZAT14 --------->LBD16      --------->ALFIN1       <-   tagttggtaacgaaaaacacgctgtctctggatggttccaatgcagagaagattatccgagtgagatctgccataaatgtgttggtgatcttcgtgaaat  1159800                            --------->At4g35610                       --------->ANAC46                       --------->ANAC58                       --------->ANAC58                       <---------TGA1a                       <<<<<<<<<<AtbZIP1                       --------->TGA1a                       <---------O2                       --------->O2                       --------->bZIP60(2)          <---------ANAC46  <---------ZAT2        <---------ANAC58    --------->ZAT2        <---------ANAC58    <---------At4g35610        ------>ZmHOX2a(2)--------->TGA2(2)      --------->ARR11(3)<-----------TGA1                                                         <---      <---------ARR11(3)<-----------HVH21                                                     -------   --------->HSFB2a(2) <---------bZIP60(1)                                                    -------   <---------HSFB2a(2) --------->bZIP60(1)                                                <---------ANAC58 --------ANAC58 <---------GLK1(1)              <------ZmHOX2a(1)                     ----------->RAV1(2) --------ANAC58<---------ARR14(2)           --------->HSFB2a(2)                  <---------GLK1(1) -- --------ANAC46--------->ARR14(2)           <---------HSFB2a(2)         <---------TOE1(2) <---------ANAC58   ttcgtctagatcgtgtggaaatgccacgtcagctcgtattcatcttcgaggatgtcatttgatatacaaattcgaacgtattgatacccctggcgctcgt  1159900  Previous    Next  AGI:  At3g04370.1    Description:  Identical to Cysteine-rich repeat secretory protein 39 precursor (CRRSP39) [Arabidopsis Thaliana] (GB:Q6E263;GB:Q6E264;GB:Q9M849;GB:Q9M8Z3); similar to 33 kDa secretory protein-related [Arabidopsis thaliana] (TAIR:AT2G33330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81929.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902) Range:  from: 1159429    to: 1161132    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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