Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <------NtERF2     --------->TOE2(3)                                             ------>NtERF2       --------->LBD16 --->GLK1(2)                                                     <---------ANAC58    --------->ATERF1(1) --->ARR11(3)                                                    <---------RAP2.6(2) <------NtERF2 ----ARR11(3)                                                    <---------ANAC58    <---------LBD16 --->ARR14(2)                                                <---------ANAC58      <---------ARR14(2) ----ARR14(2)                                  ---------->DOF2   <---------ANAC46  --------->ARR14(2) ---GLK1(2)                            <---------HSFB2a(2)   <---------ANAC58     <------ZmHOX2a(1) >AGL2                   --------->AHL20(2)---------->DOF2 ------->TEIL         --------->ALFIN1 >AGL3                 >>>>>>>>>GATA-1 --------->HSFB2a(2)<-----------GT1   <------ZmHOX2a(1)   cttgcaacttcaatttgaaattatagataaattagcaatttccagtaaagaaagttttttgtaccttgcggccaactaggaagaggagccggaagtgaga  1156400                      --------->GLK1(2)                      <---------ARR14(2)        ----------->GT1                --------->GLK1(2)          <---------At4g35610              --------->HSFC1(2)           --------->At4g35610              <---------HSFC1(2)        ------>ZmHOX2a(1)              --------->HSFB2a(1)   --------->ARR14(2)                 --------->ARR11(3)          --              <---------HSFB2a(1)   <---------ARR14(2)                 <---------ARR11(3)         <--            --------->SPL7          --------->GLK1(2)           --------->ANAC58                  ---            <---------TOE1(2)     <---------HSFB2a(1)           --------->ANAC58                 <---          ----------->HVH21       --------->HSFC1(2)            --------->ANAC46         <---------ARR11(3)       <---------ANAC46           --------->HSFB2a(1)    --------->WOX13(1)              --------->ARR11(3)  <----------DOF2     --------->ARR14(2)<---------At4g35610 --------->YAB1               <---------GLK1(2)   agggctttggctcggacgattccgaatccaactcggagattcctctgctccagtaaaaacaatcacacccaaacatcttgaagaaatacaagatttttct  1156500                                                        <---------AtMYB61                                                    <------MYB83                                              <---------ANAC58                                      --------->ZAT2<------MYB46(1)                           -------            <---------AHL20(2)        <---------ZAT2<---------ANAC58                         --------           --------->AHL20(2)         <---------At4g35610                                    <-------  --------->GLK1(2)                   --------->At4g35610       <---------GLK1(2)            <------- <---------GLK1(2)                  ------->PIF5    <---------ANAC58                       <---------MYB52(1) ------->LBD16                      <-------PIF5   --------->MYB55(2)                  <---------At4g35610 -------HSFB2a(2)               --------->TOE1(2)  <---------MYB46(3)                  --------->At4g35610 ------>HSFB2a(2)        --------->LBD16      <---------ANAC58----------->ARR10   --------->GLK1(1) < ------LBD16--------->AHL20(2)  --------->TOE2(2) --------->ALFIN1                <---------GLK1(1)--   ccagaatttggaaattaatagagaccccccaaaacccacgagctgatttcgagtgggtgaggtttagattcttcgattacagagaaatcagccgattgtt  1156600         ----------->GT1      <---------ZAT2     --------->ARR14(2)     <---------ARR14(2)  --------->HSFB2a(2)  --------->LBD16  <---------HSFB2a(2) <---------LBD16 --------->HSFB2a(2) -->KAN4(2) ->HSFB2a(1)               ------>ZmHOX2a(1) --KAN4(1)             --------->ARR14(2)                                                         <-- --MYB46(3)           <---------MYB52(1)                                                          --- ---------LBD16   <---------At5g28300                                                    --------->DAG2 ---->ZmHOX2a(1) <-----------GT1  <---------ALFIN1  <---------ZAT18--------->TOE2(3)    ---------->DOF2   cctccgggaactgggaaaatcaccgtttcctatgcccctctctctctatctctgtgccctctctctctacctcaatttgagagaaatttgaaaagcagag  1156700                                                               ---------->DOF2                                                             --------->ANAC58                                                             --------->ANAC58                                                         <---------ANAC58          *TSS                                                         <---------ANAC58       <---------YAB1                                                   <---------YAB1    <------ZmHOX2a(1)        <------                     --------->ANAC46   <---------ANAC58 <---------ANAC55(2)    --------->ICU4<------ -------At4g35610   <---------At5g28300 <---------ANAC46 --------->ANAC55(2) <-------TEIL     <------ ------>At4g35610   <---------LBD16     <---------ANAC58 <---------ANAC46   <--------P     <---------AtMYB61   agcttacgactatctcgacattcacggcgaagagatagagaggcgttgaagttgtaattgcgtaagaaagaggagaaggttgatgatgaagttatggtgt  1156800    <---------ANAC58                                 ------------>CBF    <---------ANAC58        <----------DOF2---------->DOF2                                        <-- ---ANAC46             <----------DOF2 <----------DOF2       ------->GAMYB                        --- ---ANAC58     --------->DAG2      <----------DOF2  <-----------GT1                               --- ---ANAC58    ---------->DOF2  ---------->ID1   <----------DOF2     <---------YAB1               ----   gttaatgcgtttctcaaaaagctctcttttcttttccctttctttaaaagcttttcacaataaccccagtattatacaaatattcaaattagtccattta  1156900               ----------->GT1             ---------->DOF2                                                                ---------         <---------ANAC46                                                                 --------->AtMYB61       --------->MYB52(1)           --------->TOE1(3)          <-----------GT1          ----------->RAV1(1) -------HSFB2a(2)                   --------->TOE2(3)     ----------->GT1           --------->ZAT6 ------>HSFB2a(2)                <-----------GT1  <---------ARR14(2)              <-----------GT1 ------------>AGL15       <---------TOE2(2)       --------->ARR14(2)  --------->YAB1--------->ANAC46 ------------->AGL1       <---------TOE1(2)       --------->GLK1(2)  <---------ATHB12  --------->AtMYB61   ccagaaatgtaacgggaaagtttattcatacgttttaacctcaatactttcaaatctgtatggtttaacccatcatcaaacgttttacaccaccaaaaga  1157000                                                                    <---------TOE2(3)        --------                                                              --------->ZAT14               <--------                                                              <---------ZAT14         <---------YAB1                                                            --------->ANAC46   <----------DOF2                                                         --------->ETT(2)      <---------DAG2<-------                               <---------O2           <---------ANAC46   <-----------GT1   <---------AHL20(2)    --------->YAB1      <---------CCA1(2)             <---------ANAC58<---------ARR11(3)  --------->YAB1 ->DOF2 <---------ANAC55(2)    --------->O2           <---------ANAC58--------->ARR11(3) <---------YAB1   aaccaaaaataagtaaacattttctcttatctcaagtcgcagaatgactaaacgtttcgtctacagcactaagatttactactttattgttattatatct  1157100                                 <-----------HVH21                                 --------->ABI4(1)                                 ------>NtERF2                                --------->DEAR3(1)                                --------->DEAR4(1)                                --------->ANAC58                                --------->RAP2.6(2)                                --------->ANAC58                                --------->DREB2C(2)                                ------->GAMYB                        ------>NtERF2                        <---------At4g35610                        <---------ATERF1(1)                        --------->At4g35610                       --------->RAP2.3(2)                       --------->DEAR3(1)                      --------->RAP2.3(1)                     ------>NtERF2 ----------->RAV1(1)                 <---------------AGL15                     --------->LBD16                                   --------->HSFB2a(2)                     <---------ATERF1(1)                               <---------HSFB2a(2)      <---------At4g35610      --------->MYB46(3)                     ----------------->AGL1   <-----      --------->At4g35610    <---------ALFIN1    <---------ARR11(3)   ----------------->AG   <------- <----------DOF2    --------->DEAR3(1)<-------MYC3                <-------MYC3               <------- ->ARR11(3)         --------->ANAC46  ------->MYC3                ------->MYC3            <----------DOF2 -CCA1(2)          <---------LBD16 <---------ALFIN1              <---------ANAC55(2)  -------->P --ARR11(3)    ------>ZmHOX2a(1)--------->ANAC46<---------GLK1(1)--------->ANAC55(1)--------->MYB46(3)   cttctttgtgctgtctccttctccgccgcttccaccgccacatgttatcgaaatctcacatccaaacacgtttccaaaacatgaaaacaaccctttctta  1157200                                                                                --------->LBD16                                                                               --------->ANAC46                   ------>ZmHOX2a(1)                                      <----------DOF2       <---------ALFIN1                                                ==============================      --------->MYB46(3)                                     ------>ZmHOX2a(1)<---------LBD16     ------>ZmHOX2a(1)                           ------>ZmHOX2a(1)     ------>ZmHOX2a(1)     <-------    --------->ANAC46                          ------>ZmHOX2a(1)   <---------At4g35610        <------- ------GT1     <-----------GT1      <------------------------ANAC81<---------ALFIN1     <---------ICU4 --ANAC58    --------->ARR14(2)     <----------DOF2 ------>ZmHOX2a(1) <---------ALFIN1  --------->YAB1 --ANAC58   <---------MYB52(1)  <-----------GT1 <---------ALFIN1 --------->ANAC46    --------->YAB1--   ccctctcctccaccgtttctcctcccttgttgtttctcctttcttctcctcctccttcttctccttcccgctcctcctttcccgctagaatcatcgcttg  1157300  Previous    Next  AGI:  At3g04350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18490.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43950.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04090.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61465.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40557.1); contains InterPro domain Protein of unknown function DUF946, plant (InterPro:IPR009291) Range:  from: 1153734    to: 1156783    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g04360.1    Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G33320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71478.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 1157011    to: 1158316    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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