Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-       ----------->GT1                                                                            <--       --------->YAB1                                                                            ---- ----------DOF2                   ----------->GT1                                                <--- ---->ZmHOX2a(2)                 ----------->GT1                                              ------- -------YAB1                   ---------->DOF2                                            <---------HSFB2a(2) ------ARR11(3)            <---------------AGL15           <---------ZAT18                --------->HSFB2a(2) ----->ARR11(3)      --------->YAB1           ------>ZmHOX2a(2)                   <------------MYB.PH3(2) ---->YAB1<-----------GT1  --------------->AGL15          <---------ZAT6          <---------MYB52(2) ----ATHB12 --------->YAB1--------------->AGL15--------->ZAT18               ----------->GT1  -------   atctttgaattgtaacataacaattatacctagaaaaggaaaattagatcgcacaacctagtgttcttagtaaaacagatggaaactaacttccacaagg  1120500 --------->At4g35610 <---------At4g35610 <---------ZAT2                                                            --------->TOE2(3) --------->ZAT2                                                            --------->TOE1(3) ----------RAV1(2)                                                        --------->HSFC1(2) ----ZmHOX2a(2)                                                           <---------HSFC1(2) ----->ARR14(2)                                                           <---------HSFB2a(1) ------ARR14(2)                                                         <---------GLK1(2)       ----- -->ANAC58                         ----------->GT1                   --------->YAB1            <----- -->ANAC58            ---------->DOF2     <----------ID1     ----------->HVH21        <---------YAB1   atcagctgtgaagatgcgattacacaaagaagggacatcgaaaaaaaacaaaaatttaagctcgtgacaaatcagaaccttcatgagtcttattgaactg  1120600                                                                                                <----                                                                                               <-----                                                                                              <------                                               --------->HSFC1(1)                             -------                                               <---------HSFC1(1)                            <-------                                               --------->HSFB2a(2)                     --------->ALFIN1   --------->ATERF1(1)                         <---------HSFB2a(2)                    <-----------HVH21   <------ZmHOX2a(1)                       <----------DOF2                    ---------->DOF2-------- ---->At4g35610  ------------------------>ANAC81                          ---------->DOF2 <------NtERF2 ------RAV1(1) <----------ID1        <---------ATHB12                  ------>ZmHOX2a(2)<---------LBD16   ctggaggaggctcgaagaagacgaagaagagacagacaaatcaagctttctagagaagacttcatcaactcgatcggaaagaaagacaggtcgggagatc  1120700         <---------MYB52(1)    --------->ARR14(2)    <---------ARR14(2)   --------->ATERF1(1)   <---------ZAT2   <------NtERF2   --------->ZAT2   --------->At4g35610   <---------At4g35610  <---------ATERF1(1)  <<<<<<<<<AtERF-4                                                                     <------NtERF2  <<<<<<<<<AtERF-3                                                                    --------->LBD16 -----ICU4                                                    <---------ARR11(3)      <------NtERF2 -ZmHOX2a(2)                     --------->ICU4            <---------ALFIN1--------->LBD16 ---ARR11(3)                <---------ANAC46              --------->LBD16 <---------LBD16 -->ARR11(3)          <------ZmHOX2a(2)             --------->ARR14(2)    --------->ANAC46   -------- --GLK1(1)           --------->ARR11(3)            ------>MYB46(1)       <---------LBD16   --------->GLK1(2) ->GLK1(1)           <---------ARR11(3)            ------>MYB83<------ZmHOX2a(2)    <---------LBD16   atggcagctccgtttttggacgagatcatcgcgtcttaatgaaattgaacaccaaattcccccagatcacaagtctccgggacttggccggagaatcaaa  1120800                                                                        --------->GLK1(2)                                                                      <---------At4g35610                                    --------->TOE1(3)         <---------ETT(1)          --------->ANAC46          --------->TOE2(3)  <---------MYB52(1)--------->At4g35610          --------->ANAC58  ----------->GT1         <-------TEIL    <-----------RAV1(2)             <     --------->YAB1      --------->DAG2       --------->YAB1<-----------GT1       <-------TEIL<------    <---------YAB1      ---------->DOF2       <XXXXXXXXXXXXXXXXXXXXMIR866-5P   *TSS    <----------DOF2 ->YAB1   --------->ANAC58 <----------ID1    <---------YAB1<-----------GT1 <---------REM1(1)------>ZmHOX2a(1)   acaccgatgataacgcaagagagaagaaaagggcaaaaccctaaattatcaaaattcgttttttccgacctcagaagctgtagcttcgtctttcctcttt  1120900                                                                                ----------->GT1                                                                               ------->MYC4                                                                               <-------MYC4                                                                               ------->MYC2                                                                               <-------MYC3                                                                               ------->MYC3                                                                               <-------MYC2                                                                              --------->TGA1a                                             <---------GLK1(1)                --------->ANAC55(2)                                        --------->YAB1                        <--------ABF1                                       <---------ATHB12                       <---------ANAC46                                      ------>MYB83                            =======================MYC_MYB                                      ------>MYB46(1)                         =======================                                     --------->WOX13(1)                       =======================MYC_MYB                 ------------>CBF   --------->AtMYB61   <---------AHL20(2)    <---------ANAC55(2)<---           <----------DOF2         ------------>CBF     --------->AHL20(2)    <---------TGA1a   <----       <-----------GT1      <----------DOF2 <---------ARR11(3)                --------->O2   ------->GAMYB ----------DOF2 <-----------GT1 <---------ETT(1)        <---------YAB1        <---------O2  --------- ----DOF2 <---------DAG2  ------>ZmHOX2a(1) --------->ARR11(3)           ----------->HVH21  ---------   agcttttatttgcctttttttcaatttcctctttccgaccaatcaagatttcacacatataattagacttaatatttgacacgtgtaaatttcaacgccg  1121000                                                                                  --------->ANAC55(1)                  ---------->DOF2                                                 --------->ANAC58                 <---------WRKY38(1)                                              <---------ANAC55(2)                 <---------WRKY45                                                 --------->ANAC46                 <---------WRKY12                                       -------->ABF1               <--------ZAP1                                            <-------MYC2           <---------ANAC46                                             <-------MYC3         <---------ARR14(2)                                             ------->MYC3         --------->ARR14(2)                                             ------->MYC2      <---------ANAC58                                                  ------->MYC4      --------->ANAC55(2)                                               <-------MYC4      <---------ANAC58                                                 <---------TGA1a      <---------ANAC55(2)                                              <---------ANAC55(2)      <---------ANAC55(1)                                              --------->O2  ----------->RAV1(1)     <---------TOE2(3)                           <---------GLK1(2)     --------->ANAC55(2)    <-----------GT1              --------->ARR11(3)                    ============================== ============================bZIP_DOF           ------>MYB46(1)        <---------O2  --------->MYB52(1) ------MYB52(1)<-----------HVH21 --------->GLK1(2)          =====================bZIP_DOF ---GAMYB--------->MYB52(1)      --------->ARR14(2)  ============================bZIP_DOF >ANAC46 ------->TEIL    <---------WRKY38(1)    ------>MYB83<----------DOF2       --------->ANAC58  - >DEAR3(1) <---------LBD16       <---------ARR14(2)  <----------DOF2   --------->TGA1a              <   ttgattttacgtatcggggtcaaagagtcaacaaaaatctggacaaaaccaaattcttttgtctttagttaacacgtgtctaagacgcaacagtgttttc  1121100                                                                                                  <--                                                                       <---------AHL20(2)         ---                                                                      --------->AHL20(2)       ------                                                              ---------->DOF2             --------->ANAC58                                                            <---------RAP2.6(3)           --------->ANAC46               <-----------GT1       <----------DOF2        --------->LBD16               --------->ANAC55(1)        ----------->GT1           --------->GLK1(2)         ------>NtERF2                 --------->ANAC55(2)    <---------TOE2(3)    --------->MYB46(3)                <---------ANAC46               <---------ANAC55(2)  ---------->DOF2       --------->ANAC58                   --------->RAP2.3(2)            --------->ANAC58 ============bZIP_DOF   --------->ANAC58                   --------->RAP2.6(2)        --------->AHL20(2) -------->HSFB2a(2)     --------->ANAC46   <---------ICU4 --------->RAP2.3(1)      --------->YAB1 --- ---------HSFB2a(2)--------->ANAC46  --------->TOE2(3)    <---------LBD16       ----------->RAV1(1)   ttctcaaaggttgtaatttacaatccacccaaaaacaatctttaatctttcccaaatagtgccgcaaaggcattaaatgtgccaacaataaaacgtaatc  1121200                --------->AHL20(1)                <---------AHL20(2)                                                     --------->AHL20(2)                --------->ARR11(3)                                                   --------------->AGL15                <---------ARR11(3)                 <---------ARR11(3)                ================         --------->TOE2(3)                         <---------ARR14(2)                <----------DOF2      <-----------GT1                              --------->ARR14(2)             <---------AHL20(2)   <---------ICU4                                  <---------ARR14(3)         <---------AHL20(2)  --------->AHL20(2)                               <-----------ARR10         <---------ARR11(3)  <---------AHL20(2)         --------->AHL20(2)    --------->ARR14(3)        --------->AHL20(2) <---------WOX13(1)      ---------->DOF2           --------->ARR11(3)        <---------AHL20(1)   <-- -------YAB1    <---------AHL20(1)      <---------AHL20(2)                   --------->AHL20(1)   --- ------>ICU4    --------->AHL20(2)      --------->AHL20(2)            --------->ANAC46 <---------AHL20(2) --->ICU4--------->TOE1(3) ----------->GT1   <-----------GT1  <----------DOF2--------->ARR11(3)   --- --->ZmHOX2a(1)--------->AHL20(2)       <---------AHL20(1)------>ZmHOX2a(1)  <---------AHL20(2)  ----   ctgattaattaccttaaatatattgagaaaagaaaataacaaaaaatttacaatatcttcctctctttgtctactccaatatattttctttaaatacaaa  1121300                                                                                   <---------HSFB2a(2)                                                                                   --------->HSFB2a(2)                                                                             <---------------AGL15                                                                             <----------DOF2     <---                                                                       --------->ARR11(3)       -----                                                                       <---------ARR11(3)--------->AHL20(2)                                         --------->TOE2(3)         <---------ANAC58<---------HSFC1(1) ============================================================================================MADS_MADS -------AHL20(2)                         --------->YAB1            <---------ANAC58--------->HSFC1(1) ------>AHL20(2)                   --------->YAB1                  --------->ANAC55(2) ----------->GT1 ------>AHL20(1)             <-----------GT1               <---------AtLEC2  --------------->AGL15 ----->AHL20(2)              --------->YAB1           --------->MYB52(1) ------>ZmHOX2a(2)  ---------   aaaattgcatactaaatcgaattcaagggtatcacaattctaatcttatttgaacttaactgcatgtttacttgatcttctttttctagaagtaaatatt  1121400  Previous    Next  AGI:  At3g04240.1    Description:  SEC (SECRET AGENT); transferase, transferring glycosyl groups. Identical to Probable UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase SEC (SEC) [Arabidopsis Thaliana] (GB:Q9M8Y0); similar to SPY (SPINDLY), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G11540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38782.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ55500.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ60737.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Range:  from: 1113941    to: 1120879    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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