Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <------MYB83    <---------ANAC46    <------MYB46(1)   <---------MYB46(3)  --------->ALFIN1  <---------ANAC46 ---------ZAT2 ---------O2 ---------TGA1a ---------bZIP60(2) ---------ANAC46 --------AtMYB61 -------HVH21 --->ALFIN1                                --------->ETT(2) --ANAC46                                  <---------ETT(2) --ANAC58            ------>NtERF2        --------->DDF1 --ANAC58         <------NtERF2    ------>NtERF2                                          --------->At5g28300 -MYB46(3)        --------->LBD16 --------->LBD16                                        ----------->GT1 >MYB111(2)     <---------LBD16  <---------ANAC58                                       <---------DEAR3(1) -DEAR3(1)    <---------SPL7     <---------ANAC46       <---------ZAT14              --------->ANAC46 >MYB55(2)   --------->DEAR3(1)  <---------ANAC58      --------->ALFIN1              ----------->HVH21   tgaggtgggtatagaccgcccggggcgaagtcaatgcgggcaatgtcgaccccaagagtgttgagaccaggcattcttttgacatccacgacggtgattt  1102400                                                                                         <----------DOF2                                                                                        <---------HSFC1(2)                                                                                        --------->HSFB2a(1)                         <---------HSFB2a(2)                                            --------->HSFC1(2)                         --------->LBD16                                              <-----------ARR10             <---------ZAT2                                                           --------->ARR14(2)             --------->ABI4(2)                                                        <---------ARR14(2)            --------->ALFIN1<---------DOF5.7(2)                               ------>ZmHOX2a(2)     ----------->HVH21   --------->HSFB2a(2)                                <---------AGP1   --------     --------->LBD16    <---------LBD16                                     --------->ARR14(2)     <---------SPL7     <---------HSFB2a(2)       --------->ICU4            --------->ARR11(3)    --------->ANAC58    --------->HSFB2a(2)  ----------->GT1      <-----------------AGL1<---------HSFB2a(1)    --------->LBD16     <---------ANAC46     <---------ZAT6    <---------MYB52(1)  --------->HSFB2a(2)    --------->ANAC58   <---------LBD16   <------NtERF2        <-------GAMYB <---------ARR11(3)   <---------LBD16  <---------GLK1(1)   --------->LBD16       <-----------HVH21<----------DOF2 <---------SPL7  <---------MYB52(1)     <------NtERF2 --------->ATHB12      <---------ARR14(2)   ---- ------>NtERF2<---------ANAC46        <---------LBD16<---------ATHB12      <---------CCA1(2)---------   tgacgcccggaccggtgctggtatttccgggaacgtttaggccggaagtgtaaaaatcattcgccgttacacattttggatctttgcagaactttccatt  1102500                                                        <<<<<<<<<MYB98                                                      <---------YAB1                                                    <---------ICU4                                                <---------AHL20(2)                                                --------->AHL20(2)                        <---------AHL20(2)     --------->AHL20(2)                       --------->AHL20(2)   --------->AHL20(2)        ----------->GT1<---------AHL20(2)   <---------AHL20(2) --------->YAB1  <---------GLK1(1) ------->AGL15  --------->TOE2(3)           --------->ATHB51  <---------YAB1<---------YAB1 ----->AHL20(2)<----------ID1     <---------TOE2(3) --------->YAB1        <---------At4g35610       - -------->AGL3 ----------->GT1    <---------TOE1(3)--------->ICU4<---------YAB1--------->GLK1(1)    =   tacataaactgtgtaaaacgtcaaattaaatgttttgaggtttgaattatttaattatgttactatgatttttggcatatgatatccagattgaagaata  1102600              --------->TOE1(2)             <---------ANAC58             <---------TGA1a             --------->TGA1a             <---------ANAC58             <---------ANAC46             <---------ANAC55(2)              ----------->RAV1(1)             --------->ANAC55(2)            <------NtERF2             ================================MYC_MYB            <-------TEIL                <---------MYB46(3)        --------->LBD16                 <------MYB83       <-----------RAV1(2)              --------->MYB52(2)     <------ZmHOX2a(2)                  <------MYB46(1)     --------->CCA1(2)                 <---------AtMYB61                   ----------->GT1    --------->ARR14(2)                 <---------DEAR3(1)                 <-------TEIL    <---------ARR11(3)                <---------MYB52(1)               <---------HSFB2a(1)    --------->AGP1                   <-------GAMYB                     <---------HSFC1(2)    --------->ARR11(3)              <---------ANAC58                   --------->HSFC1(2)    <---------ARR14(2)              <---------ANAC46    <---------ZAT6 <---------MYB46(3) --------->DOF2              <---------MYB52(1) <---------ALFIN1  <------ZmHOX2a(1)      --------->MYB52(1) ======================bZIP_DOF     <---------ANAC58--------->ZAT14   <---------------AtSPL8   tcaaaagatccaggtacgtgagattacctccattagtttcgttggtggcaacacagtagtcttgaagaggagatggttcgtaacaatatacaaacgaaga  1102700                                                    <---------AHL20(2)              --------->ICU4                 <----------DOF2                   <---------TOE1(2)       ----------->RAV1(1)                --------->ARR11(3)                <---------ANAC58        <   --------->ANAC58                   --------->At4g35610                   <---------ANAC58     <---   --------->ANAC58       ---------->DOF2 <---------ARR11(3)            <---------HSFB2a(1)  <------- ---------->DOF2--------->ARR11(3)    <---------At4g35610             *TSS <-------TEIL     <--------   tgctaaagccaacaaaatgattttggctaaaagaaaatgcagaagacctttcattttttttctctcaaacagaaatgttcgtgtgttttttttttttccc  1102800                                <---------ANAC58                                <---------ANAC58                               <-------TEIL                              --------->AtLEC2  <---------ANAC46 <---------ANAC58 ---------ANAC46   <---------AtLEC2 --------RAV1(1)   <---------ANAC46 ----GT1           <---------ANAC58      <-----------TBP                                       <----- ---GT1       <-----------RAV1(1)      <----------DOF2                                  ---------->DOF2   tgttgtggattaagcgatgttgcatgagaaacatgcatgcgctatatatagtccaagaagtcgtccaaaaacatttgattttagtttacatatagcgcta  1102900            --------->At5g28300                                                          ---------->DOF2           --------->LBD16                                            <----------DOF2  --------->REM1(2)          --------->ANAC46                                         <-----------GT1  <---------ANAC58          --------->ANAC55(1)                                ------>ZmHOX2a(1)      <---------ANAC46          --------->ANAC58                                 <---------ANAC58         <---------ANAC58         <---------LBD16                                   <---------ANAC58        <-----------------  <---------AHL20(2)                                    <----------DOF2            <---------TOE2(3) --------->AHL20(2)                                    --------->HSFB2a(1)    <---------AHL20(2) <---------AHL20(2)---------->DOF2                     <---------HSFB2a(1)   --------->AHL20(2) <---- -----DOF2--------->ANAC58  <---------ICU4  <---------AHL20(2)  <----------DOF2   <-----------GT1   tattttaatttcacggaaaatcaaagcccattaatacaagaagttttaaattgtgggactttcctgcttttactttctatttattaacgtgtaaagcttg  1103000                        <---------AHL20(2)                        <---------AHL20(1)                        <--------ATHB1                        --------->YAB1                        <---------ICU4                      --------->CCA1(2)          <---------ANAC58                                 <---------AHL20(1)          <---------ANAC46                                 --------->ARR11(3)          <---------ANAC58--------->ICU4          --------->ANAC55(2)              <---------------AGL15    --------->ATHB12    --------->AHL20(2)        --------->YAB1   --------->CCA1(2)               --  <----------DOF2      --------->ICU4        <-------TEIL  <---------ARR11(3)      --------------->AGL15 ------TaNAC69(2)    --------->YAB1  <-------TEIL<-------TEIL     --------->ARR11(3)      ----------- -----WRKY18(1)     <---------AHL20(2)   ----------->GT1   --------->AHL20(1)     ----------------->AGL3   actgcttcatttgagtgtttgtttaataatttttaaaaatacatagttacatacataataagatattagatatatgtttttgtttctataatttgtaatt  1103100                        --------->AHL20(2)                  --------->AHL20(2)             <---------AHL20(2)             --------->AHL20(2)            --------->AHL20(2)            <---------AHL20(2)            --------->AHL20(1)            <---------AHL20(1)                        --------->ZAT6                         <-------         --------->AHL20(1)                       ------->GAMYB                           --------->AHL20(1)         --------->AHL20(2)                     <---------At4g35610                       --------->AHL20(2)         <---------AHL20(2)                     --------->At4g35610                       <---------AHL20(2)        <---------AHL20(2)                     --------->MYB52(1)                        --------->AHL20(2)        --------->AHL20(2)                  --------->ANAC46                             <---------AHL20(2)    >>>>>>>>>>GT-3b<---------AHL20(2)       --------->ANAC58                       --------->YAB1 -------->DOF2   <---------AHL20(2)     <---------AHL20(2)                        >>>>>>>>>MYB98 >GT1 --------->YAB1    <---------AHL20(2)  --------->ANAC58 <-----------GT1     <-----------GT1   ttaaagaaaaataatttattttaaatttaaattaacacatatataaacgcaactgaacactaaaaaccattttgttttgtttttaacataattttattat  1103200                                                                                        <---------MYB46(3)                                                                                        --------->MYB52(2)                                                                            ---------->DOF2                                                                         <---------ANAC55(2)                                                                         --------->ANAC58                                         <---------ARR11(3)              --------->ANAC58                                       <---------YAB1                    <---------ANAC46<-------GAMYB                                       --------->ICU4                    --------->ANAC55(2)                        --------->ANAC55(2)     --------->HSFB2a(2)      <---------HSFB2a(2)    ----- --YAB1                 <---------ANAC55(2)     <---------HSFB2a(2)     <---------LBD16<-------TEIL <   cgaactaaacaatatttcaaaccaatacatatttgtagttcatgatttttccaaaactctaaaatccatttagttacggaaaggagaagttcgttgtata  1103300  Previous    Next  AGI:  At3g04190.1    Description:  germin-like protein, putative. Identical to Germin-like protein subfamily 1 member 5 precursor [Arabidopsis Thaliana] (GB:Q9M8X5); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT3G04180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62261.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62252.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Germin; (InterPro:IPR001929); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 1101885    to: 1102770    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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