Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 ----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                             --------                                                                                            ---------                                                                                           <---------ALFIN1                                                                                         <---------ATERF1(1)                                                                                         ------>NtERF2                                                                                       --------->LBD16                                                                                      --------->LBD16                                                                                      --------->HSFB2a(2)     ----------->GT1              <----------DOF2                                    <---------LBD16    ----------->GT1            <---------ARR14(2)                                    <---------ANAC46   --------->DAG2              --------->ARR11(3)                                   <---------LBD16  ---------->DOF2              --------->ARR14(2)                                <---------GLK1(1) ------->GT1                   <---------AGP1                                   <---------ARR11(3) ----At4g35610                 <---------ARR11(3)  --------->ANAC58             <---------ARR14(2) <- --->At4g35610                <---------CCA1(2) <---------ZAT2                  <-----------ARR10---- ----ZAT2              --------->DAG2       --------->TOE1(3)                   --------->ARR14(2)--- --ZAT14              ---------->DOF2      ----------->RAV1(2)                  --------->ARR11(3)--- ->ZAT14         ----------->GT1 ------>ZmHOX2a(2) --------->ANAC58      ---------->DOF2----------->HVH21   tgaaaaaagtttaaaaattcagaaaaaagtttggatctttagaaaacctgagcaggtaatctaatcgccaaggagaaaagagtatctccggggacaccgg  1073800      --------->DAG2    ---------->DOF2 ------ETT(2) ------->HVH21 ---->RAP2.3(1)        <------MYB83 ----ATERF1(1)         <------MYB46(1)                      <------ZmHOX2a(2)                      -- --->LBD16           <--------P                            --------->ARR14(2)        --------->bZIP60(2) -->DEAR3(1)        <---------MYB52(1)                     <---------ARR11(3)        --------->bZIP60(1) ->DEAR3(2)        --------->LBD16                         <---------ARR14(2)        <---------bZIP60(1) >MYB52(1) <------NtERF2<------ZmHOX2a(1)            --------->At5g28300             <---------O2  -- -----NtERF2      --------->HSFB2a(2)            <---------DOF5.7(2)                 --------->O2---- ----->DEAR3(1)   <---------HSFB2a(2)            --------->MYB52(1)     --------->ANAC46         ---- -------->RAV1(1)<---------LBD16               --------->ARR11(3) <---------ANAC46 ------->GAMYB----- --->NtERF2<---------At4g35610          --------->MYB52(1) --------->ARR11(3)   --------->MYB52(1)---   cgacataaaaggcagcgcttccggtaggattgaagctagcgctaccgaagataacggtgaagatcgagacgtagacgaaaatcaacgacgtcaaaatcac  1073900                                                 <---------SPL7                                               --------->DEAR4(2)                                               --------->RAP2.3(1)                                              <---------ATERF1(1)                                              --------->ABI4(1)                                             --------->ANAC46                                             --------->DEAR3(1)                                             --------->RAP2.3(2)                                             --------->RAP2.3(3)                                             <---------DEAR3(1)                                            --------->ATERF1(1)                                            --------->RAP2.3(1)                                            --------->DEAR4(2)                                            --------->ERF1                                            --------->ORA47(2)                                     --------->ARR11(3)                                     <---------ARR11(3)                                <---------DEAR3(1)                               <---------LBD16------>NtERF2                             <---------ATERF1(2) ------>NtERF2    ------>NtERF2            --------->DEAR3(1)--------->ORA47(2)                ------->GAMYB ------->GAMYB               <---------DEAR3(1)<------NtERF2                   --------->ANAC58 ---->MYB46(1)             --------->MYB52(1)--------->RRTF1(3)     <---------ANAC46 ---->MYB83 --------->ATHB12<---------LBD16<---------ATERF1(1)--------->DAG2   --------->ANAC58 ----->MYB46(3)  <---------ANAC58  ----------->ARR10   --------->GLK1(1)   <------ZmHOX2a(1) ----->AtMYB61   <---------ANAC46 <------NtERF2--------->ATERF1(1) --------->At4g35610 ---->MYB46(3)<---------WOX13(1)<---------ANAC46--------->RAP2.3(3)<---------At4g35610 ------>MYB52(1) <---------ANAC58--------->LBD16--------->DEAR3(1)--------->MYB52(1)   caacggagcccaagtgattgcctgaaaatcaccggcggagataatcgccgccgtctgaattccaaaggtagcggagaggacaacccaagagaaggtcatc  1074000                                                                                               <-----                                                                                               ------                                                                                               ------                                                                            <---------HSFB2a(1)<-----               ------>NtERF2   <---------ATHB12                             --------->HSFC1(2) <-----              --------->DEAR3(1)--------->YAB1                            ---------->DOF2      <-----              --------->DREB2C(2)                                      <---------HSFB2a(2)     ------           ------->GAMYB   --------->ANAC46                     <-------TEIL<---------HSFC1(2)<------          --------->MYB46(3)--------->MYB46(3)                <---------SPL7--------->HSFB2a(1)------     --------->ANAC46      --------->ANAC58                  <---------ANAC58          <----------DOF2  --------->ARR14(2)       --------->ANAC58                  <---------ANAC58 --------->ARR11(3) ----  <---------ARR14(2)    ------->GAMYB                   <----------DOF2--------->HSFB2a(2) <---------LBD16 <---------GLK1(1)     <---------ALFIN1       ---------->ID1 <---------ANAC46 <---------ARR11(3)<----   aacatatccccaatcgccgacttcaacacacccatcatcttcgtcttcgtcttcttctctttggcgttcgtatcgagaaagttctctgtcttttggggat  1074100                  <---------SPL7                 <------MYB83                 <---------MYB46(3)                 <------MYB46(1)                <---------------AtSPL8                <---------------AtSPL3                --------->ALFIN1               <---------ANAC46              <------MYB83              <------MYB46(1)          <---------ANAC58          <---------ANAC46          <---------ANAC58          <------MYB83          <------MYB46(1)         --------->MYB111(2)         <---------AtMYB61         --------->MYB55(2)         --------->MYB46(2)         --------->MYB111(1)         --------->MYB59<---------DEAR3(1)        <---------MYB55(1)<------NtERF2       <---------MYB52(1)------>NtERF2      <-------GAMYB <-------TEIL     <---------MYB46(3) --------->DEAR3(1)    <---------TOE2(3) <-----------HVH21  <---------MYB46(3)--------->SPL7 ----ARR14(3) <---------ANAC58 --->ARR14(2) <---------ANAC58 --->ARR14(3)--------->MYB111(2) ----AGP1--------->MYB52(2) ----ARR14(2)--------->MYB46(2)                                              ---------->ID1 ----ARR11(3)--------->MYB55(2)                                       <---------ARR11(3) --->ARR11(3)<---------MYB46(3)                                       <---------GLK1(2) ---GLK1(1)  <---------DEAR3(1)                                       --------->ARR11(3) --->GLK1(2)--------->ALFIN1                ----------->HVH21      *TSS     <-----------GT1  -------- -->ZmHOX2a(2)<---------ANAC46<----------DOF2                 ------>ZmHOX2a(1)<----------DOF2  <---- --ZmHOX2a(2)--------->MYB111(1)    <----------DOF2     <-----------GT1<---------RVE1(1)    <--------   ctggttgtggttaggtgggtggtacgtcgcctctttagctttctctctcacagctatttttctcctcaaatagatttttttctttttgaaaatttgtttt  1074200                                                                                           <---------YAB1                                             <-----------GT1                             --------->ATHB12                                         --------->YAB1                                  --------->ATHB51                                         --------->ATHB12                                -------->ATHB1                                        --------->ICU4                                   <---------ICU4                                       <---------WOX13(1)                               <---------AHL20(2)                               <---------ARR11(3)                                       <---------ATHB51                               --------->ARR11(3)                                       --------->ICU4                              <---------GLK1(1)                                      --------->AHL20(2)                              --------->CCA1(1)            <---------ZAT6           --------->AHL20(2)                              --------->GLK1(1)        <---------MYB52(1)           <---------AHL20(2)          <---------ANAC58    <---------CCA1(1)     --------->MYB46(3)           --------->AHL20(1)          <---------ANAC58    <---------RVE1(1)   --------->MYB52(1)             <---------AHL20(1)   ---------->ID1  <---------YAB1 <----------DOF2 ------>MYB83                  --------->AHL20(2) -->ID1 <-----------GT1       --------->RVE1(1)   ------>MYB46(1)           --------->MYB46(3) --------------------ANAC81  <---------ARR11(3) <---------MYB46(2)        ----------->RAV1(1)   ----- ----------------ANAC81      --------->ARR11(3) <---------MYB59          <----------ID1 --------->AHL20(2)   tttttgtttttttcttgttttatgaaacgaagatatctttgaatgattaacctaaccgatagtcttacagagattgcaacaaatatataaattattagtt  1074300                                                     --------->ATHB12                                                     <--------ATHB1                                                     --------->ATHB51                                                     <---------ICU4                                                     --------->YAB1                                                     -------->HAHB4                                                     <--------HAHB4                                                    <---------YAB1                         --------->AHL20(2)                                                    --------->ICU4                         <---------AHL20(2)                                                    <---------ATHB51               <---------ANAC58                    <---------ANAC58                --------->AHL20(2)             <---------ANAC46                    <---------ANAC46          ----------->GT1                   --------->DAG2        --------->At4g35610                   <---------ZAT6                   ---------->DOF2  <---- ---->ATHB12        <---------ANAC58      <---------YAB1       --------->AHL20(2)  <---------ANAC58   attgaatatcagttgaaattatacgtggacttaaactaggttttattagagttaataattagagtttaaattaagcatataaaaagcgtggattttattt  1074400          <---------REM1(1)        <---------ZAT2        <---------ARR11(3)        --------->At4g35610   --------->ARR11(3)                   --------->AHL20(2)            <---        <---------At4g35610   <---------AHL20(1)                   <---------AHL20(2)         -------    --------->STY1(2)         --------->AHL20(1)        <---------AHL20(2)               <---------MYB52(1)    <---------STY1(2)    <------ZmHOX2a(1)            --------->AHL20(2)           <---------ANAC58 -----AHL20(2)          ----------->GT1               <---------AHL20(2)           <---------ANAC58 <   tatattagctagctgtagcctatgagaggaaatatttttcatgtgtttcatgttatataaatttggaaatttataagtataaattgcatcccttaagtta  1074500                                                        <---------AHL20(2)                                           <---------AHL20(1)                                           --------->AHL20(1)                                   --------->TOE1(3)   --------->AHL20(2)                                   --------->TOE2(3)   <---------AHL20(2)                                   <---------MYB59 <---------AHL20(2)                                <-----------GT1   <---------AHL20(2)                              <---------AHL20(2)  --------->AHL20(2)    --------->ARR11(3)   <---------YAB1           <---------YAB1 --------->AHL20(2)           --------->AHL20(1) ------YAB1           <---------TOE1(3)    <---------AHL20(2)           <---------AHL20(1) -->ARR11(3)          <---------TOE2(3)   --------->AHL20(2)         --------->AHL20(2) ---------YAB1       ---------->DOF2      <---------AHL20(2)     <---------YAB1                <-----   ttgttattttagagaaaatagattaaagttattttaacctaaaattaaatttttaaattttttttttatgtttatatattgacttcaattctattagctt  1074600                                        <---------YAB1                ----------->GT1        --------->AHL20(2)             ------->GAMYB       --------->ANAC58                            --------->YAB1     <----------DOF2             --------->ANAC46                    <----------DOF2    <---------ANAC58             --------->ANAC58                   <---------ANAC58    <---------ANAC58       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <---------ANAC58 -----DOF2--------->MYB52(1)   --------->MYB52(1)             --------->WOX13(1)                 ----   taactagctttccaacggtagtaatttcaagtcaaacggaatattatagcaattctattagtttcaattagctttccaacgatagtgatttcaagtcaaa  1074700  Previous    Next  AGI:  At3g04090.1    Description:  SIP1;1 (SMALL AND BASIC INTRINSIC PROTEIN 1A). Identical to Aquaporin SIP1-1 (SIP1-1) [Arabidopsis Thaliana] (GB:Q9M8W5;GB:Q0WWC3); similar to SIP1,2 (SMALL AND BASIC INTRINSIC PROTEIN1B) [Arabidopsis thaliana] (TAIR:AT5G18290.1); similar to small basic intrinsic protein 1 [Vitis vinifera] (GB:ABD46741.1); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 1072099    to: 1074167    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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