Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ZAT2                             --------->ZAT2                             <---------At4g35610                             --------->At4g35610         <---------ANAC58   ------->TEIL         <---------ANAC58  <-----------RAV1(2)      <--------P  <---------ARR14(2)     <---------MYB52(1)  --------->ANAC58     <-------GAMYB<---------ARR11(3)               <---------ANAC46      --------->TOE1(1)    --------->LBD16      --------->ANAC46<------MYB46(1)          ------>ZmHOX2a(1)   <---------ANAC46  <---------HSFB2a(2)--------->MYB59        <-----------GT1        <-----------GT1  <---------LBD16 --------->ARR11(3)    <---------AtMYB61     <-----------GT1     --------->AHL20(2) ------GT1<----------DOF2--------->ANAC58<------MYB83<---------MYB52(1)  --------->TOE2(1)  <-------- --AHL20(2)       --------->ARR14(2)  <---------MYB52(1)   <---------CCA1(1)  ----------->GT1 <------   ctgttccggttgctttccaatatccagacgcagctgctctgtttggtcttgctccgtttggatatttcctatccctcggactgaaaaaataccactcttt  1062700                                                                                                -----                                                                                     ---------->DOF2                                                                       <---------AHL20(2)       <----                                                                       --------->AHL20(2)       -----                                  <---------AHL20(2)                 --------->AHL20(2)         <----                               --------->AHL20(1)                   <---------ARR11(3)          -----                     <---------YAB1                                 --------->ARR11(3)   ----------->GT1                --------->At4g35610      ----------->GT1    ----------->GT1        --------->CCA1(2) --------->LBD16<---------ZAT2 <---------AHL20(1)          --------->DAG2        --------->YAB1 <---- -DAG2          <---------At4g35610   --------->YAB1      ---------->DOF2     ---------->DOF2  ------ ----DOF2   --------->TOE2(3) --------->AHL20(2)     --------->YAB1 <---------AHL20(1)  ----------->GT1   ctccccaaatggagccttagctgatgatacaaatatataaacatagttatatcacttataaaaagtagaatatatatatacaaagataaaagggaaaata  1062800          <---------ANAC46        <-----------GT1     --------->MYB52(2)     --------->MYB59     --------->MYB111(1)     --------->MYB46(2)                     --------->ETT(2)   <--------P                               <---------ETT(2)   <---------MYB52(1)                   --------->ARR11(3) <---------MYB46(3)                     <---------ARR11(3)                                        <-- ---->ARR11(3)                   --------->GLK1(1)                                             <----- -----ARR11(3)                   --------------------->WRI1                                    ------ ---->AHL20(1)                  --------->ARR14(2)                                            ------- -----AHL20(1)                  <---------ARR14(2)                                <------ZmHOX2a(1) ---->AHL20(2)             --------->ARR14(2)                            <---------LBD16  <---------- -----AHL20(2)             <---------ARR14(2)                 ---------->DOF2    ----------->GT1  --- --->AHL20(2)----------->GT1 ------>ZmHOX2a(2)    <---------DEAR3(1)    --------->ALFIN1  <----------   tattggttagttacctggtaaatcccatggatcggatttgtagatatcgacatcggcgataatcgaaagcgggactggggaagaggaaactttcttcctt  1062900                                                                             --------->ATHB12                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                    <---------ANAC58 --------->MYB52(1)                                                 <---------ANAC58 -------ANAC55(2)          <---------MYB46(3)                      ------>ZmHOX2a(2)               <- ----MYB52(1)            <---------MYB52(1)                       <------ZmHOX2a(2)            <----- >ZmHOX2a(1)           <---------MYB46(3)                        <---------ARR14(2)            <----- -->TOE2(3)            <-----------RAV1(1)                       --------->ARR14(2)  ---------->DOF2 -------AG    <---------ARR11(3)                            ------>ZmHOX2a(2)<---------ICU4   ------- ------>ANAC55(2)    <---------At4g35610                  --------->ARR11(3) --------->YAB1   <------ -------AGL1  --------->ARR11(3)           <---------LBD16<---------ARR11(3)<---------YAB1   --------   aggtaatggagaatgagttcttcatctgttggatgaaatcgaaaccctggaggtaaactcgatcttggatccttgcttatcattgtttaaaggaatgata  1063000 --------AHL20(2)                            --------->ARR11(3) ----CCA1(1)                       ---------->DOF2 ----RVE1(1)                    ----------->RAV1(1) -->ARR11(3)             ---------->DOF2     --------->AHL20(1) ---ARR11(3)         ---------->DOF2    ----------->GT1<---------AtMYB61      ---------->DOF2 ------- ->YAB1       <---------YAB1   <----------ID1<---------AHL20(1)   --------->CCA1(2)          <-------   ttttaagtagaaagttttgatagaaaagaaagaacaacaaaggagaaaatattggttttggtgaagagctatgagataaacaaagaagtgagccaaagat  1063100                                                    <---------ANAC46                                                   ---------->ID1                                             <---------GLK1(1)                                        --------->ZAT14                                        --------->REM1(2)                                        <---------ZAT14                                             -                                       --------->ALFIN1                    <---------AHL20(2)       -                                     <---------ANAC58                      --------->AHL20(2)<-------                                     <---------ANAC46         <----------DOF2              <---------TOE2(3)       <---------ANAC46              <---------ANAC58        <---------ANAC58          <------------CBF -->ATHB12*TSS                 <---------AHL20(2)<-----------RAV1(1)   <---------AHL20(2)  <---------YAB1 --ATHB12 ---------->DOF2 ------------>CBF  <---------ZAT6   <---------ANAC58   ---------->DOF2------   tgaaatttttcgtagagcaggttttgagggcaatttatggtgtgtagagttctgtcgtttagtgcttgaatgtataattttttaaagaaaattgagattg  1063200                                                      --------->CCA1(2)                                                      <------ZmHOX2a(2)                                                     --------->AGP1                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                     --------->ARR14(2)                                               <------ZmHOX2a(1)                          --------->AHL20(2)      <---------YAB1              --------->DAG2     <---------ARR14(2)              --------->AHL20(2) -------->ICU4                   ---------->DOF2 ---------->DOF2                   ----------->GT1 -------->AHL20(2)      <---------AHL20(2)     ==============HOX2a_HOX2a   ----------->GT1<---------AHL20(2) -----CBF             <---------YAB1       --------->LBD16       <-----------HVH21--------->DAG2 ----->GT1            <---------AHL20(2) <---------LBD16        <---------ZAT6   ---------->DOF2  <--   aaatatttatgaaaaatatagaatattattttctgtaaagtagaccggaggaaaagatccaaaatagtgtcaagtagtggataaaaagtaaataaaatca  1063300                        ---------->DOF2                       --------->AHL20(2)         --------->ARR14(2)         <---------ARR11(3)         --------->ARR11(3)        --------->CCA1(1)                             <----------DOF2                       ---------        --------->RVE1(1)    ------->TEIL             <---------DAG2                        ---------    <---------YAB1  ------>MYB83                      <---------------AGL15   <-----------TGA1  <---------ZAT6    ------>MYB46(1)                   --------------->AGL15<---------ARR11(3) -------MYB52(1)  ------->GAMYB<---------DAG2   --------->YAB1             --------->ARR11(3) -------   gttagtattaatatcttcaaccaaataaaagaacctttttaaaaaacttattagaactttatggagaaactagcaaatatcgtcatcgaaactcaagcat  1063400                                              <---------ARR11(3)                                              --------->ARR11(3)                                <---------AHL20(2)                         --------->ANAC58                               --------->AHL20(1)                          --------->ANAC46                               <---------AHL20(1)                          --------->ANAC58                            <---------AHL20(2)<---------AHL20(1)          ------->TEIL                            --------->AHL20(2)<-----------ARR10         <---------ZAT18                       --------->AHL20(2)     --------->AHL20(1)        --------->ZAT18             -                       <---------AHL20(2)    --------->RVE1(1)       <---------ANAC46         ------>ZmHOX2a(1) >ANAC58            --------->AHL20(1)   <---------YAB1           <---------MYB52(1)   <---------GLK1(2) >ANAC58            <---------ARR11(3)<---------YAB1        <---------AtMYB61        <---------AHL20(1) -->YAB1  <---------GLK1(2)<---------AHL20(2)--------->CCA1(1) ---------->ID1        <---------ARR11(3)   gttttatgaacagaaacttgaatatataatttatatatttcttattaatatcttactcaattttggtcgttttgtgcacgtagtctatatattctcctaa  1063500                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                                 <---                                                                                               ------                                                                                             --------                                                                                             <-------                                                                                           --------->AHL20(2)           <---------YAB1                                                                  <---------AHL20(2)         --------->ATHB51                                                                --------->AHL20(2)         --------->AHL20(2)                                                             --------->AHL20(1)     <-------TEIL                                                                       <---------AHL20(1) <---------AHL20(2)                  ---------->DOF2        --------->YAB1      ----------->GT1<----- -------->AHL20(2)          <----------DOF2  --------->ATHB12        --------->ATHB12  --------->AHL20(2)   tattaaatgcattatttatgtctaattagactttttatgtaaaggcttcattgtttatacattcaaaacaaagattgctaagtggaaaaatatatatata  1063600  Previous    Next  AGI:  At3g04070.1    Description:  ANAC047 (Arabidopsis NAC domain containing protein 47); transcription factor. similar to NAM (Arabidopsis NAC domain containing protein 18), transcription factor [Arabidopsis thaliana] (TAIR:AT1G52880.1); similar to NAC domain protein [Cymbidium hybrid cultivar] (GB:BAF36563.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 1061533    to: 1063110    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version