Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <XXXXXXXXXXXXXXXXXXXXMIR782                                              --------->ZAT2                                              <---------ZAT2                                        <------NtERF2                                       --------->LBD16                                       <---------DEAR4(2)                                       ------>NtERF2                                       <---------ATERF1(1)                                      --------->ATERF1(2)                                      <---------ATERF1(2)                                      <---------DEAR3(1)                                      --------->DEAR3(1)                                     --------->DEAR3(2)                                     --------->RAP2.3(1)                                     --------->ATERF1(1)                                    <---------ATERF1(1)                                    ------>NtERF2                                    <---------ZAT2                                  --------->ATERF1(1)                                 <---------ATERF1(1)                                 --------->LBD16                               --------->ATERF1(1)                               <------NtERF2  --------->GLK1(1)                               <---------LBD16--------->At4g35610                 --------->MYB46(3)<---------ARR14(2)              --------->MYB46(3)--------->DEAR3(1)           --------->GLK1(1)  ------>NtERF2   <---------At4g35610       <---------TOE2(3)     <---------DEAR3(1)  --------->ATHB12           --------->DEAR3(1) <------ZmHOX2a(2)   <---------ALFIN1<------NtERF2                    <------NtERF2 ---------ARR11(3) <-----------HVH21--------->ZAT2                 <------NtERF2 -------->ARR11(3)--------->AtMYB61--------->ARR14(2)            --------->ETT(1) ---->At4g35610 ------>NtERF2--------->ANAC46 <---------GLK1(1) --------->RAP2.6(3) <---------DAG2 -----At4g35610--------->RAP2.6(2)<------NtERF2               <-----------RAV1(1)   <----------DOF2   cagatcattagggatagccaccatcacttcgacgccggagccggcgagagctcccatggtgtttgtgtcggcatcgaacaacttcactttctgtatattg  1039100                               --------->DOF5.7(2)                               <------NtERF2                          <---------DEAR3(1)                    --------->DEAR3(1)                                                 <------NtERF2                 <---------ALFIN1                                                     --------->LBD16                 --------->AtMYB61                                                   --------->DEAR3(1)                <---------MYB55(2)          --------->ANAC46                        <---------LBD16                --------->MYB46(3)          --------->ANAC58                       --------->ABI4(1)              <---------ALFIN1 --------->At5g28300                                 ------>NtERF2  ---              --------->ANAC46<---------MYB46(3)             --------->ZAT14      --------->DEAR3(1)          --------->GLK1(1)   <---------DEAR3(2)             <---------ZAT14     --------->DEAR3(2) -          --------->At4g35610<---------DEAR3(1)         --------->LBD16         <---------ATERF1(1)--  <----------DOF2--------->DEAR3(1)         --------->ANAC58 <---------ZAT18   <---------ALFIN1  ----   ttgtctttaagcatctccaccaccgtcttcggcggtaactgatgactcgccattgttccccagtttactcccaaaccagagacaccgccggagagaaaac  1039200            <---------YAB1         --------->ICU4                                                                         -----       <---------At4g35610                                                                     ------     <------NtERF2                                                                             <-----    --------->LBD16                                                                            ------   <---------DEAR3(1)             --------->MYB59                                             <------   <---------ANAC46               --------->MYB52(2)                                          -------  <---------LBD16             <---------ZAT6                                                  <------ ------>MYB52(1)         ------->GAMYB---------->DOF2                                         <------ -------->ANAC46      --------->MYB52(1)                                 <----------DOF2     <------- ------->SPL7--------->YAB1  <------NtERF2                           <-----------GT1   <---------MYB52(1) ----->TOE2(2)  ---------->DOF2------------>MYB.PH3(2)         <---------AHL20(2)  ------>ZmHOX2a(1)   atacggcggagatgatgataaagacaacggcagagttagttatagcactctgttttcgtcgataattcatttttcctttgttttcctctgttttttccgg  1039300         <---------ANAC58 ---->LBD16 --->LBD16  <------MYB83 ----HSFB2a(2)                                 <---------TOE1(3) --->HSFB2a(2)                        ---------->DOF2         --------->GLK1(2) ---LBD16<---------AtLEC2     <---------ARR11(3)              <---------ARR14(2) -->HSFB2a(2)                 --------->ARR11(3)              --------->ARR14(2)                  --- ---HSFB2a(2)           ---------->DOF2--------->DAG2 ---------->DOF2                            ---- ---ANAC46  <------MYB46(1)  --------->GLK1(1) <---------TOE2(3)                                 <--- --LBD16 <---------ANAC58    <---------GLK1(1)---------->DOF2<---------GLK1(2)           <---------ZAT6   gaaaattttgtgcttggtattagaaaaaaagaaatcttggaaaagttttaaagtttgaaagaagaatctgatgggagaagaattggaagaagtgtaagag  1039400          <---------AHL20(2)       --------->ARR11(3)       <---------AHL20(1)       <---------ARR11(3)       --------->AHL20(1)                <---------REM1(1)      <---------AHL20(2)              --------->MYB52(2)  --------->AHL20(2)          <---------YAB1                                         --------->At4g35610  <---------AHL20(2)   <---------ANAC46<-------GAMYB--------->ATHB12                 --------->ZAT2 ------>CCA1(2) <---------ANAC58      <-----------RAV1(1)                 --------->ATHB12     <----- ----->ARR11(3) <---------ANAC46      <---------MYB46(3)     ---------->DOF2         <---------At4g35610 ------ARR11(3) <---------ANAC58<---------MYB52(1) <---------YAB1        --------->ICU4  *TSS  ------   atatataaatattttttggtgtgttttgtgttctgtttgtttgttgtagctcgatgattcgaataaagaatagaaatgatttgtttaagctgacaaaaat  1039500                                    <---------ANAC55(2)                                   --------->MYB59                             <------ZmHOX2a(2)                            <---------ARR11(3)        ---------->DOF2     --------->ARR11(3)                    <------ZmHOX2a(1) ----ARR11(3)            <------ZmHOX2a(1)                       ----------->GT1         <----------DOF2 --->GLK1(2)---------->DOF2--------->GLK1(1)                >>>>>>>>>TBF1        XXXXXXXXXXXXXXXXXXX>MIR866-3P   ctgagtgaaggaaagaaagaaggaagaggagatcaaataggtaagagagactatagaaggaagaagaaggagaaacagagtcaaaaccggcctttgaaac  1039600                <---------ARR11(3)              <------MYB46(1)                --------->ARR11(3)              <------MYB83               --------->RVE1(1)          <---------AHL20(2)               --------->CCA1(1)          --------->AHL20(2)           --------->AHL20(2)          --------->AHL20(1)           <---------AHL20(2)          <---------AHL20(1)                             --------->ARR11(3)     ------>MYB46(1)                  --------->AHL20(2)                       --------->ZAT6     ------>MYB83                   --------->AHL20(2)                       <-----------GT1    --------->ORA47(1)          <---------AHL20(2)                         <---------YAB1       -----   --------->DEAR3(1)           --------->AHL20(2)         <-------TEIL  <--------HAHB4 ------>ZmHOX2a(2)  --------->MYB46(3)        --------->AHL20(2)  ----------->GT1         <---------YAB1<---------ARR11(3)  --------->DEAR3(2)        <---------AHL20(2) --------->MYB59        <---------ZAT6<---------YAB1 --   agaaaccgaccattaaaatatctatagtttttaattaaaaatatataatttggttaacatatacatagactagtattattaacactatgatctataccat  1039700                         ------>MYB83                         ------>MYB46(1)                        ----------->RAV1(1)                       ------->GAMYB                      --------->MYB46(3)                      <---------MYB55(2)                    ------>MYB46(1)                           <---------AHL20(2)               <-----                    --------->MYB52(1)                    --------------->AGL15             ---------                    ------>MYB83             <---------At4g35610                 <-----------GT1        <---------AHL20(2)                   --------->At4g35610                <---------AHL20(2)  --------->YAB1  <---------MYB59 <------NtERF2   --------->YAB1               <---------AHL20(2) ---->AtLEC2      <---------MYB46(2)    --------->ALFIN1  <---------------AGL15--------->AHL20(2) ----->TEIL       --------->AtMYB61     <---------ZAT6    ===========================================   gcatttatagtttatttagacctaaccaacatagttggcgaagtgttagctaacataattctattttaagtatatatgaaatttaatcttttgcacaaca  1039800                                  <---------SPL7                                  --------->TOE1(2)                                 --------->ANAC58                                 --------->ANAC46                                 --------->ANAC58             ----------->GT1                                --------------->AtSPL3       <---------TOE1(2)                                <---------------AtSPL3 <---------ICU4              --------------->AGL15                    --------->ATHB51 ----ALFIN1   <---------------AGL15 --------->SPL7    <---------YAB1               <----------DOF2 >ANAC46<---------YAB1        <---------REM1(2)   --------->TOE2(3)          --------->YAB1 =============================MADS_MADS           --------->TOE1(3)       <----------DOF2   cttcaagtttttgattctatattgtgtaagtttacacgtacgaatagagaaaccttataattgcaggttaatatcgctttcatagctttagtatgtctaa  1039900                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(1)                                                                                   --------->ANAC58                                                                                   --------->ANAC55(2)                                                                                   <---------ANAC55(2)                                      ---------->DOF2                              --------->ANAC46                                    <-------TEIL                                   --------->ANAC58                            <---------------AtSPL3                                 ----------->GT1                            <---------------AtSPL8                                ------->TEIL                          <------ZmHOX2a(2)                                       <-------TEIL                         --------->ARR11(3)                                   <---------------AtSPL3                <----------DOF2  <---------ANAC55(2)                          <---------------AtSPL8             <---------ARR11(3) --------------->AtSPL3                       <---------AtLEC2             --------->ARR11(3) <---------------AtSPL8                      <-------TEIL  <---------AHL20(2)      --------->TOE2(3)  <---------ARR11(3)        ------->TEIL      ----------->HVH21    --------->AHL20(2)   gtagaaaacgttgattatctttttcaagatcgagtacgtacaaagtacaaacgtattttggagaagtaaccctgatggtgcatgtacgtaaattaaattg  1040000  Previous    Next  AGI:  At3g04010.1    Description:  glycosyl hydrolase family 17 protein. similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT5G18220.1); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G64760.1); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G64760.2); similar to beta-1,3-glucanase, acidic [Coffea arabica] (GB:AAQ90287.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83571.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro: Range:  from: 1036848    to: 1039489    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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