Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->LBD16                                                                 --------->At4g35610                                                                 <---------At4g35610                                                                <---------ANAC46                                                               <---------LBD16                                                             --------->ARR14(2) <---------ICU4          --------->AHL20(2)             <---------YAB1 ------>YAB1        --------->MYB46(3)                <---------ICU4 --->YAB1          -------->P                         --------->YAB1 --->TOE2(3)      --------->MYB52(1)          --------->LBD16<---------ARR14(2) --->AtSPL8     <---------MYB52(2)   <---------YAB1  --------->ICU4                           <------ ----AtSPL8     XXXXXXXXXXXXXXXXXXXX>MIR420 <---------LBD16 <---------GLK1(1)             <----------DOF2   taatcaattccaaaaaaaactaaccaaaaaaatgaaaacatcattctccggatgaattatgaaattccgcagaaaattgatgaaatcgatgactttaaac  1030200             <----------DOF2            ------>ZmHOX2a(2)          <---------ARR11(3)    <---------GLK1(2)                   ------>ZmHOX2a(2)  --------->ANAC46                    <---------ARR11(3)  --------->LBD16 <-----------GT1     <---------AGP1                ---------->DOF2 --------->HSFB2a(2)            <---------ARR11(3)     <---------YAB1--------->DAG2   --------->LBD16 <---------HSFB2a(2)            --------->ARR11(3)    <---------ARR11(3)             <---------ANAC46 -----GT1 --------->ARR11(3)  ------->TEIL            --------->ARR11(3)    --------->AHL20(2)     --   ttcccagaaactgatctttttaacaaaaaatgaacatcttgatctgtgaacataaatatcatcgaacacaaaaagggattatatactccgtattgaacta  1030300                                                                       <---------HSFB2a(2)                                                                --------->TOE2(3)                                                                --------->TOE1(3)                     ------>ZmHOX2a(1)             XXXXXXXXXXXXXXXXXXXX>MIR159A                  ----         --------->ANAC46               ------>ZmHOX2a(1)       ----------------->AG          <------         --------->ANAC58             --------->YAB1            =====================================         --------->ANAC58           --------->ARR14(2)     <---------ARR11(3)                 ------- ------->YAB1        <----------DOF2<---------ARR14(2)     --------->ARR11(3)             <---------ARR14(2)   ttgataaatacacgaaaatggtccttttttgaaattcgaatcctaatcgaattgaattgaagataaccctaatcgagaaatacagagtttcgaattctga  1030400                                                                           <---------TOE2(3)                                                                           --------------->AtSPL8                                                                           --------------->AtSPL3                                                                           <---------------AtSPL8                                                                          ---------->DOF2                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                                                 ------>MYB83     --------->DAG2                                              ------>MYB46(1)    ---------->DOF2                                              ----------->RAV1(1) ----------->GT1                                               <---------MYB59 ------>DOF2<---------YAB1                                     --------->MYB46(3) ---------AGL15                                               --------->ANAC46 =========MADS_MADS      --------->MYB52(1)                 <---------WRKY18(1)                 ----- -------->AGL15     ---------->DOF2                       <---------WOX13(1)              <----------DOF2   aaagagtaaagttgatgaatagcaaagtaacgaagagaaccagtgtctgatacagcgaagattgacccaacaaaattaaagtaccaattcttctttccca  1030500                                                                           ----------->HVH21                                                                           --------->ANAC46                                    <---------ARR14(2)                    --------->SPL7>>>>>>>>>TBF1                              --------->ZAT18                   <----------DOF2------>NtERF2                    <---------ARR14(2)           --------->GLK1(2)    --------->ANAC46  -------------                    --------->ARR14(2)          <---------GLK1(2)   <-----------GT1  >>>>>>>>>TBF1                    --------->GLK1(2)   XXXXXXXXXXXXXXXXXXXX>MIR399B/C<---------YAB1 ---------------- ---->ANAC46       <---------GLK1(2)--------->ARR14(2)  <----------DOF2  --------->CCA1(2)         *TSS   gcaaaaatcaagaagacccaagaatctgagagtccccagataccaatagagaatcgcgcttcttctctttttacgatacgacgcgaagaagaagaaaacc  1030600                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58                                                     <---------LBD16                                               ----------->HVH21                                               --------->ALFIN1                                             <---------ANAC46                                           <---------ANAC46                                         -                                           <------MYB83 <------NtERF2                              <-                  <----------DOF2          <---------ANAC58                                     <----              <-----------GT1              <------MYB46(1)<----------DOF2 <-------GAMYB    --------->ANAC58         <------ZmHOX2a(1)                 <---------ANAC58      <--------P<---------MYB52(1)   -----     ---------->DOF2                      <---------AtMYB61   <---------TOE1(3)            --------->ANAC58 ----------->ANAC81                       --------->MYB46(2)  <---------TOE2(3)          ---------->DOF2 -------->ANAC81 <---------DAG2           --------->MYB111(2)<---------ANAC46 <---------YAB1    <----   agagaaaaaaaggattcaaccttttgtttttgaatgttgagagtttggtgtgatgggcgggtttagggtaagtctccgttatttttgggtctaaagcaaa  1030700                                           --------->AHL20(2)                                           <---------AHL20(2)                                           --------->YAB1                     --------------->AGL15     <----------DOF2                  ------>MYB46(1)                         <---------------AGL15     <---------DAG2                   ------>MYB83                           <-----------------AGL2 ------->P <---------AHL20(2)        ----------->RAV1(1)                   <-----------GT1 ----------GT1                --------------->AtSPL8                      <---------YAB1 -------ARR10                 <---------------AtSPL8            --------->TOE2(3)          --------->HSFB2a(2) ---->ARR14(2)                <---------------AtSPL3  ------->GAMYB  <---------ZAT6        <---------HSFB2a(2) -----ARR14(2)--------------------->WRI1--------->TOE2(3)      <---------HSFB2a(1)     <---------ANAC46   tctacccctttattttttttgtatttatcgaaatggtaccaacatttatatttcaaccaagtagaaccttggtgttattactgcaaatggtttgtagaaa  1030800                                                                                      <---------At4g35610                                                                                  <---------REM1(1)                                                                                 <---------TOE2(3)                                                                              <---------AHL20(2)    -                                                                              --------->AHL20(2)   --                     <---------YAB1          --------->ATHB12        <---------DAG2  ------->TEIL  <-       <---------ZAT14        <---------YAB1<---------YAB1         ------->TEIL<---------AHL20(2) <--   ctaatttagtgaagcgactgcttattagtaatttgatagaatggttttgattagcttcttaattctctgaaccttttgaatttaatgtagctaagaaata  1030900          <---------ARR11(3)           <-------GAMYB                                    --------->DAG2          --------->ARR11(3)           <---------At4g35610                             ---------->DOF2 <-------TEIL<----------DOF2     --------->TOE1(2)                                  ----------->GT1 -------->CCA1(2)              <------ZmHOX2a(2)               <---------YAB1    --------->MYB52(1) ------->ARR14(2)             --------->ARR11(3)          <---------MYB46(3)----------------->AGL1 --------ARR14(2)             <---------ARR11(3)         <--------P         <-----------------AGL1 ----ZmHOX2a(1)           ---------->DOF2               <-------GAMYB     <-----------GT1   ggatacgttggaggtcttttacccaaaataaagatcatgggagttgatttagttatggggttgttttgaatgttttttacacaaaccggtaaagtttgta  1031000                                                                   --------->AHL20(2)                                <---------AHL20(2)                <---------ARR11(3)                            <---------AHL20(2)                    --------->ARR11(3)                            --------->AHL20(2)                    --------->AHL20(1)                          --------->AHL20(2)             --------->AHL20(2)                       ---                <---------AHL20(2)<---------AHL20(2)     <---------AHL20(2)       <---------ARR14(2)                --------->YAB1  --------->AHL20(2)   --------->AHL20(2)<---------AHL20(2)         <--                --------->AHL20(2)--------->AHL20(2)<---------AHL20(2) --------->AHL20(2)      <-----            --------->AHL20(2)<---------AHL20(2)    --------->AHL20(2)--------->AHL20(2)       ------            <---------AHL20(2)--------->AHL20(2)  <----------DOF2 <---------AHL20(1)  ------>ZmHOX2a(1)         ----------->GT1  <---------AHL20(2)    ---------->ID1 --------->AHL20(2) --------->ARR14(2)   tgttagtctcatagttaattaaaactatatatatatatatatatcaatttgtctttaaattaaaaaaaaatatttaattcatcgaatcctgtttgattaa  1031100  Previous    Next  AGI:  At3g03970.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT1G54385.2); similar to binding [Arabidopsis thaliana] (TAIR:AT1G54385.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23490.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Survival motor neuron interacting protein 1; (InterPro:IPR007022) Range:  from: 1028004    to: 1030599    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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