Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ------>MYB46(1)                                                            <---------HSFB2a(2)                 --------->ARR11(3)                     --------->GLK1(1)                 <---------ARR11(3)                     <---------GLK1(1)      --------->TOE2(3)             ---------->DOF2                        <------MYB83     ------>MYB83           --------->AHL20(2)                       <------MYB46(1)--------->TOE2(3) -------->At4g35610                               --------->ALFIN1 <---------MYB59 >DOF2     <---------AHL20(2)     <---------YAB1  <--------P--------->HSFB2a(2)<----------DOF2      <   gaagatgacttaattaaaagaacttagttttgaattatgttttttcttcagggttgggatttctaaaaacctaatacacatctttaatctgtgtgttttc  1023900                                                  ------->TEIL                                                 <---------ALFIN1                                               --------->ANAC58                                    --------------->AGL15                                    ------>ZmHOX2a(1)<---------At4g35610                                    <---------------AGL15                                   --------------->AGL15                                   <-----------------AGL2                                        ----                                ---------->ID1 --------->ANAC58                          <-------TEIL                           <----------DOF2    --------->PCF2                        ---------->DOF2 ---------At4g35610      <XXXXXXXXXXXXXXXXXXXXMIR863-3P                     <----------DOF2 <--------   tctgcttatctaaacaaaacttacattgtcttttgttcctcttaaggggacgcacatctgataaaacaaaaactcaggctttccttcaaagttcatatca  1024000                                                                                               ------                                                                                         --------->O2                                                                                         ============                                                                                         --------->ANAC46                                                                                       <---------ALFIN1                                                                       <---------ARR11(3)--------->bZIP60(2)                                                         <---------ANAC55(2)           ----------->RAV1(1)    <-----------GT1<----------DOF2        --------->YAB1 --------->TOE2(3)          --------->PCF2 -- ------->GT1  <-----------GT1            <---------AHL20(2)            --------->ARR11(3)--------->TGA1a -CCA1(2) <---------ARR11(3)            --------->AHL20(2)--------->LBD16          <-----------TCP11(1)   tgttattttcaagttatttctcttttagtccctaaactttcatataataagactctcatccgtaaatgtcaaaaatctcacattttggcccacatcacca  1024100             ------>NtERF2            <---------ALFIN1         --------->ANAC58         --------->ANAC58         --------->ANAC46  ----------->GT1                                                                              ------ ----------->GT1                                                                               <----- --------->AGL15                                                                  <-----------HVH21 =========bZIP_DOF                                      ---------->ID1           <----------DOF2----- -------->DOF2   <---------MYB52(1)     <---------AtMYB61              --------->AHL20(2)  ----------   taaaagttaaaacgacaccgtttagcacaaaaaccagaaggaatggtgttctctattcgtccctaaactttcatataatacaactttcacccctaaagat  1024200     ------------>CBF                               --------->ZAT18    ------>ZmHOX2a(2)                               <---------ZAT18   <------ZmHOX2a(2)                            <---------MYB52(1)  --------->ARR11(3)                        ------>NtERF2  <---------AGP1                           <---------ALFIN1  <---------ARR11(3)<---------ALFIN1    --------->ANAC58                                          <-- --->ARR11(3)      <------NtERF2        --------->ANAC46                                        ----- ----ARR11(3)     <------NtERF2         --------->ANAC58         *TSS                          ------ ---->CCA1(2)    --------->PCF2   --------->AHL20(2)--------->ZAT14                    <---------ZAT18 >DOF2   <---------DAG2      --------->AHL20(2)<-------GAMYB   --------->AHL20(2)  --------->HSFB2a(2)   ttaagatctcaatttttggcccccatccccttaaaatttaaaacgacaccgttgtgaactcccattttaaaacctcgaaagttttctagggcaatctcgg  1024300                                                                        <---------TOE2(3)           - <----------DOF2                                         <<<<<<<<<TBF1  <---------TOE1(3)   <-------- <---------DAG2                          --------->GLK1(2)         <---------DAG2           <-------- -------ALFIN1                           <---------ARR11(3)        <----------DOF2          <-------- ->NtERF2                                --------->ARR11(3) <<<<<<<<<TBF1         <----------DOF2   < --->ANAC46                        <---------------------WRI1  ---------->ID1  <-----------GT1  -----   ccacttttactcacagaaaaccttctctctaaacttcttcgaaaatctcacagagcttcttcttcttcgcttttagggtttttgctctattgtttcgagt  1024400                           --------->TOE1(3)                           --------->TOE2(3)  ------>MYB46(1)      --------->DOF5.7(2)  ------>MYB83         <---------MYB52(1) -------->MYB46(3)    <-------GAMYB                                                              <--- -ANAC58             ------>ZmHOX2a(2)   <------MYB83                                            <--- -ANAC58   <---------HSFC1(2)            <------MYB46(1)                                     -------- -ANAC46   --------->HSFC1(2)           --------->MYB55(2)                                   -------- ---------MYB59    <---------ARR11(3)   <---------MYB46(3)                      ---------->DOF2  ---- ------>HVH21      --------->ARR11(3)  <---------ANAC46------>NtERF2   <---------ATHB12      --------   gacccaacttcgaagcttatagatcgttaccttagaaaatggtgggtatgtcgatgcagccatatggtattcaatcgatgcttaaagaaggttacaggca  1024500                         --------->YAB1                         --------->ANAC46                       --------->ICU4                           --------->ANAC58        <---------HSFB2a(2)                              <---------ICU4 ------CCA1(2)      <------NtERF2               --------->GLK1(1)    <---------ALFIN1 ------At4g35610    <---------MYB52(1)          <---------GLK1(1) <---------ALFIN1 ->ANAC58          <-----------HVH21            --------->At4g35610------->TEIL               ------- ->ANAC58          <---------RAP2.6(3)    <---------AtLEC2      --------->ANAC58        <-------TEIL ----->At4g35610  --------->RAP2.6(2) <---------ANAC58   --------->AtMYB61           <---------MYB46(3) ->ANAC46   --------->ANAC46          <---------ANAC58--------->ANAC46              <---------ATHB12-   tctctctggtctcgacgaagccgtcattaagaacattgaagcttgcaaggagctctccaccattactcgcacctctctcggtcccaatggttcgtaatgt  1024600                                                                                           <---------ANAC58                                                                                           <---------ANAC46                                                                                       ------>ZmHOX2a(2)                                                                                     <---------ARR14(2)                                                                                     --------->ARR11(3)                                                                                     --------->ARR14(2)                                                                                     <---------AGP1                                                                  <---------ANAC58   <---------ARR11(3)                                                                  <---------ANAC58   <-----------ARR10                                                          <-----------GT1  <---------REM1(1)   <-----     <---------WOX13(1)                              <---------ANAC58    <---------ZAT14   <---------ANAC58   --------->ATHB12             <---------YAB1       <---------ANAC46 <---------ANAC46--------->GLK1(1)  <---------YAB1              --------->YAB1         <---------ANAC58 <---------ANAC58<------ZmHOX2a(2) -->ICU4         ------>ZmHOX2a(2) ------->TEIL   <---------MYB52(1)  <---------ANAC58<---------GLK1(1) -------------->AGL15        --------->ICU4  <-----------GT1 <----------DOF2        <------ZmHOX2a(1)   ttctctgattgggatttgatctaatactgaaatgatgaatctcgttttctccgtttcgttttacttttacttgagtgttgtaagtaggatctcgcttgtg  1024700                     <---------MYB52(1)                  ------>ZmHOX2a(2)                <---------ARR11(3)                         <-------TEIL          --------->ANAC58                                --------->ARR14(1)          --------->ANAC58                                --------->GLK1(2)      --------->ANAC58                                   <---------ARR14(2)              <---------TOE2(3)      --------->ANAC46      ---------->DOF2              <---------GLK1(2)              --------->YAB1      --------->ANAC58   <---------ZAT6 <----------DOF2  --------->ARR14(2)--------->ARR11(3)     <-- ----ANAC46     <---------AGP1--------->DAG2             --------->ARR11(1)<---------ARR11(3)  <-----   tatagtttaagcaagcttgatctgttactgtaaaggtgaagtctttttctagggattcagattcggattagaactgagttcttctgtttataatgtttca  1024800  Previous    Next  AGI:  At3g03950.1    Description:  ECT1; protein binding. similar to ECT3 (evolutionary conserved C-terminal 3) [Arabidopsis thaliana] (TAIR:AT5G61020.2); similar to ECT3 (evolutionary conserved C-terminal 3) [Arabidopsis thaliana] (TAIR:AT5G61020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23486.1); contains InterPro domain YT521-B-like protein (InterPro:IPR007275) Range:  from: 1021412    to: 1024016    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g03960.1    Description:  chaperonin, putative. similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G18190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23487.1); similar to unknown [Populus trichocarpa] (GB:ABK95308.1); similar to unknown [Populus trichocarpa] (GB:ABK93043.1); contains InterPro domain T-complex protein 1, theta subunit; (InterPro:IPR012721); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844); contains InterPro domain Chaperonin TCP-1, conserved site; (InterPro:IPR002194); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR Range:  from: 1024265    to: 1027898    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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