Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 ----------->GT1                               <------MYB46(1)                               --------->ANAC55(2)                               <------MYB83                    <------MYB83                    <------MYB46(1)                   <---------MYB46(3)                   --------->MYB111(2)                   --------->MYB59                   <---------------AtSPL8         <---------ANAC46     --------->MYB59         <---------ANAC58 <---------ICU4         <---------ANAC58--------->ICU4      ------>ZmHOX2a(1)<-----------------AGL1     <---------ANAC58  <-----------------AG     <---------ANAC58--------->ZAT18 -----ARR14(2)     --------------->AtSPL8  ----------->GT1 ---->ARR14(2)     --------->MYB111(1)--------->ANAC55(2) -----ARR11(3)    --------->ALFIN1    --------->ANAC46 ---->ARR14(3)  <------MYB83  --------->MYB46(2)                                             -------- ---->ARR11(3)  <---------ANAC46      --------->ANAC58  <----------DOF2                    --------->ALFIN1 -------ARR10   <------MYB46(1)<---------ANAC55(2)   ---------->ID1                ----------->HVH21 ---->AHL20(1) --------->MYB111(1)    --------->ANAC58 --------->TOE2(3)       --------->AHL20(2) -----AHL20(1) --------->MYB46(2)     <---------ANAC55(2)                      <---------AHL20(2) -----ARR14(3) --------->MYB59<---------TOE2(3)     <-----------GT1  <---------AHL20(2)  --------->ALFIN1   tcttggtccttgcttattaggtgggtactaattaggtaatacgaaatgttattttttcctttaatctagatttaaaatgaataaaatgacagtgtgtgac  1006400                                                                        ------>ZmHOX2a(1)                                                                        ======================HOX2a_HOX2a                                                    ----------->GT1  ---------->ID1     <----------DOF2                                                --------->ARR11(3)   <-----------GT1   ------>ZmHOX2a(2)       --------->AHL20(2)                      --------->YAB1       <-----------GT1  <---------ARR11(3)    ----------->GT1                         --------->YAB1<---------ARR11(3)         --------->ARR11(3)   <---------TOE2(3)      <----------DOF2<---------ICU4   --------->ARR11(3) <---------YAB1         - --->HVH21   <-----------GT1            --------->ICU4   --------->GLK1(1)  <---------AHL20(2)    ---   acaataagataaattttacgagctatctctttcatccatgtaatatttataatcttgtgaaatcttgatttttcctatttttattctgatctttttgtaa  1006500                      --------->ATHB12                    <---------WOX13(1)            <---------TOE2(3)        <---------AHL20(2)                       --------->YAB1       <---------ARR11(3)                      <---------YAB1         --------->AGP1       <---------AHL20(1)                   <---------YAB1    <---------MYB52(1)       --------->AHL20(1)                <----------DOF2--------->KAN4(2)       --------->ARR11(3)           <---------GLK1(1)  --------->KAN4(1)       <---------AHL20(2)           --------->GLK1(1)  <---------KAN4(1)------>ZmHOX2a(2)       --------->AHL20(2)          <---------ARR14(2)  <----------TaMYB80            ------->MYC3 --------->DOF2  <---------YAB1    --------->ARR14(2) ------->TEIL    --------->ARR11(3)       ------ ------>YAB1<---------AHL20(2) <---------LBD16--------->TOE2(3)<---------ICU4        <-------MYC3   tgaaaagaatatatttattctgcttgattagtctacggatttccttttcattaatgaatattccattattctgatctagtttatacacatggtgaagaca  1006600                                                                                          <---------ANAC46                                                                                        <---------ICU4                                                                                        --------->YAB1                                                                                        --------->ATHB51                              <---------ANAC58                                          --------->ATHB12                              <---------ANAC46                                         <---------ATHB12                              <---------ANAC58                                         --------->ICU4                       <---------AHL20(2)                                              <---------ATHB51                     <---------AHL20(2)                                            <------ZmHOX2a(2)                   <---------AHL20(2)                                             <---------ARR11(3)                  --------->AHL20(1)   <----------DOF2                           <------ZmHOX2a(1)                  <---------ARR11(3)--------->ARR11(3)             --------->ARR14(2)--------->WOX13(1) --->CCA1(2)      <---------AHL20(1)<---------ARR11(3)          <---------YAB1--------->YAB1     ----   tgggctatttctataatctatatattttttttgtgtgagaactttgctaaacagacacatagtattctgaatactcaaaatcaggatcaattatgggtat  1006700                                            <---------YAB1                                          --------->YAB1                                         ----                                    <----------DOF2                                              <---                                 --------->ARR11(3)                                             -----                                 <---------ARR11(3)                                         <--------                           --------->AHL20(2)     ----------->TBP                          --------->ALFIN1                      ------>ZmHOX2a(1)  <---------YAB1                               --------->ANAC46                     --------->TOE2(3)--------->AHL20(2)         <---------YAB1       --------->ANAC58         <---------YAB1    <---------AHL20(2)     --------->AHL20(2)                  --------->ANAC58      <---------YAB1 <---------ANAC46 <---------AHL20(2)        <-----------GT1     --------->ZAT6  - ----->YAB1   --------->YAB1--------->AHL20(2)    <---------AHL20(2)      <----------TaMYB80<--------   catcttatatgattattcatattccttatataaattatcttttattataaatataaataacaaaattttcattctcatattccataacacgaagtgtgta  1006800           ----------->TBP           <---------AHL20(2)           --------->AHL20(2)  <-----------GT1 ----->ANAC55(2) ------ANAC55(2)                 --------->ANAC58 -->TEIL ----------->TBP         --------->ANAC46 -------AtSPL8                   --------->ANAC58       ------->GAMYB ------>TEIL               --------->AHL20(2)    <-----------GT1 -------AtSPL3        ------------>CBF           *TSS  <<<<<<<<<TAC1  <---------GLK1(2)         -----   cgtatcactctatataaataaacttgcaataacataagcaagactcacatttttccaactgtcttcatatcagactctctgatcaaataaacccaaaata  1006900                                          <---------GLK1(2)                                      ------>MYB83                                      ------>MYB46(1)                                     ----------->RAV1(1)                                     --------->MYB52(1)                                    ------->GAMYB                                    --------->AtMYB61                                   <---------MYB52(2)                                   --------->MYB46(3)                                   <---------MYB55(2)                                  --------->ANAC58                                  --------->ANAC58                                  -------->P                               <---------At4g35610          --------->HSFB2a(2)                        <----------DOF2 ------->GAMYB    <----------DOF2                    ------->TEIL--------->MYB46(3)      <---------ANAC46                 <---------YAB1--------->At4g35610      <---------ANAC58                    ---------            --------->ANAC58  --------->ANAC46          <---------ANAC58                <---------HSFB2a(2)          ---------->DOF2   --------->At4g35610     <---------ANAC58                    --------->HSFB2a(2) ----->DOF2 --------->ANAC58<---------At4g35610     <---------ANAC58             ---------->DOF2   aagaagagagaagaaagccatgaatgctttagcagcaaccaacagaaacttcaagcttgcttctaggcttcttggtttagactcaaagctcgagaaaagt  1007000                                                                                  --------->LBD16                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)                                                                     --------->At4g35610                                                                   ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)                                                                  --------->CCA1(2)                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                 -                                                                 <---------ARR11(3)         ---------                      <---------TOE2(3)         <<<<<<<<<TBF1    --------->ARR11(3)        <------ZmHOX2a(2)                   <------ZmHOX2a(2)  ------>ZmHOX2a(1)          <---------AGP1 ------>ZmHOX2a(2)   -                   ==========================HOX2a_HOX2a         --------->AGP1<------ZmHOX2a(2)    - <---------YAB1   --------->ARR11(3)  ====================================HOX2a_HOX2a     <---------ARR11(3) ->DOF2  <-----------HVH21<-------TEIL===================================HOX2a_HOX2a      --------->ARR11(3)   cttctcattcccttcagagagatcaaggttcgatgttttcctctgttttcttcttccatctataacagatctgcagaaccgatccggttcaagatcattt  1007100              --------->ATHB51            ------>MYB46(1)            ------>MYB83       ------->TEIL          ------->GAMYB       <-----------GT1         --------->MYB46(3) --------->HSFB2a(1)       --------->MYB52(1)   <---------HSFB2a(1)     <---------MYB59       --------------->AtSPL8     <---------MYB52(2)    <---------KAN4(2)                      <---------MYB46(3)   <-----------ARR10       <---------------AtSPL8                 <-----------RAV1(1) -------->ANAC58           <---------------AtSPL3               <----------DOF2 >ATHB12-------->P    <-------PIF5                              ------>ZmHOX2a(1)      --------->ANAC58 -------->ANAC46      ------->PIF5                   --------->ZAT6                    --------->ANAC46 -------->ANAC58   <-----------RAV1(2)  ---------->DOF2        --------->TOE2(3)       --------->ANAC58   gaacggaactaaccaactattgcaggtggaatgtaccataccaaaagacgatggaactctagcatcctttgttggattcagagttcaacacgacaatgca  1007200                                        <------------------------ANAC81                                --------->LBD16                               --------->HSFB2a(2)           --------->DAG2      <---------HSFB2a(2)         ---------->DOF2 --------->ARR11(3)       ----------->HVH21<---------GLK1(1)  --------->PCF5        --------->GLK1(1)                           --------->AtMYB61   <---------AtLEC2  --------->PCF2       --------->ARR11(3)          <---------MYB52(1)         --------->AHL20(2) <-----------HVH21     <---------ARR11(3)   <-----------GT1       >>>>>>>>>>MYB80  <---------ICU4   agaggtcccatgaaaggtggaatcagatatcatccagaggtttgttttactctgtttttttttcatcaaaccaaaacaaattcaatattggcatgaagta  1007300  Previous    Next  AGI:  At3g03910.1    Description:  glutamate dehydrogenase, putative. Identical to Probable glutamate dehydrogenase 3 (GSH3) [Arabidopsis Thaliana] (GB:Q9S7A0); similar to GDH2 (GLUTAMATE DEHYDROGENASE 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07440.1); similar to GDH2 (GLUTAMATE DEHYDROGENASE 2) [Arabidopsis thaliana] (TAIR:AT5G07440.2); similar to GDH1 (GLUTAMATE DEHYDROGENASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G18170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23481.1); similar to GDH1 [Actinidia chinensis] (GB:ABR45723.1); similar to glutamate dehydrogenase 1 [Glycine max] (GB:CAI53673.1); contains InterPro domain Glu/Leu/Phe/V Range:  from: 1006849    to: 1009025    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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