Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------O2                      --------->TOE2(2)     --------->ANAC58                      --------->TOE1(2)     --------->TGA1a                      --------->TOE2(3)     --------->ANAC55(1)                                  <---                     --------->HSFB2a(1)    --------->O2                                         <---                     <---------HSFB2a(1)    <---------TGA1a           <---------bZIP60(1)       <----                --------->ANAC58            --------->ANAC58       ----------->TGA1             -----                --------->ANAC58            --------->ANAC46       ----------->HVH21          <------              --------->MYB52(1)         <---------REM1(2)        <-----------HVH21     -------->P           --------->ANAC58      =====================bZIP_DOF   ------>ZmHOX2a(1)  --------->ANAC46           --------->ANAC46      <----------DOF2         <-----------GT1            --------->ANAC58           --------->ANAC58<---------MYB52(1)      <---------At4g35610--------->bZIP60(1) <---------LBD16          --------->LBD16--------->MYB52(2) --------->ANAC55(2)----------->RAV1(2)  --------->ANAC58   catcttcttccccacgaaacgaaaccttcgttgttctttggtttacacgtctctgcttatttctctcctgtgacgacaacaattccacacaacccggttt  1002100    <---------ANAC46                                  <----------DOF2  <---------ANAC46                                ---------->ID1 ---MYB83                                     <---------AtLEC2 ---MYB46(1)           --------->LBD16 <---------AHL20(2) -----AtMYB61        <---------LBD16   --------->AHL20(2) ---->MYB59 <---------AHL20(2)         <---------AHL20(1)                     <-----------GT1     <-- ---MYB52(1)--------->AHL20(2)        --------->AHL20(2)                --------->YAB1   --------->YAB1   ggttctgtgtgtatttaaatgtttccggtttattctggtattaaatttgtatgtccctttcggtttacaaacaaacaaaattacattacaatcagaacaa  1002200                                                                                             --------                                                                                             <-------                                                                                            <------NtERF2                                                                                           --------->LBD16                                                                                          --------->RAP2.3(2)                                                                                         --------->RAP2.3(1)                                                                                         --------->ATERF1(1)                                                                                         <------NtERF2                                                                                         <---------LBD16                                                                                        <---------RRTF1(1)                                                                                        <---------RAP2.6(1)                                                                                        <---------ERF1                                                                                        <---------ATERF1(1)                                                                                       --------->DEAR3(1)                                                                                       <---------DEAR3(1)                                                  --------->DOF5.7(2)                 --------->ATERF1(1)                                                  --------->At5g28300                 --------->ERF1                                                  <---------MYB52(1)                  --------->RAP2.3(1)                                                 ----------->GT1                      --------->RRTF1(1)                                                 <---------DEAR3(2)                   --------->RAP2.6(1)                                                 --------->LBD16      --------->SPL7 ------>NtERF2                                                --------->ATERF1(2)   <---------ZAT14<---------RAP2.3(1)           ---------->DOF2           --------->AtLEC2                 --------->ZAT18--------->LBD16         --------->YAB1           <-------TEIL  <---------ATERF1(2)   --------->ZAT14<---------ATERF1(1)        <<<<<<<<<ARR2      ------->GAMYB       <------NtERF2      <---------------AtSPL8------>NtERF2        <---------ATHB12  --------->MYB46(3)  ------>NtERF2       <---------------AtSPL3<---------RAP2.3(1) <-----------GT1        <-----------GT1      --------->ANAC46    --------->ICU4     <---------DEAR3(1) -------ICU4          --------->AHL20(2)--------->ARR14(2)  --------->YAB1         <---------LBD16   aaattacacaatcaaaagtcgaaatttaacagacgattcatggaaacgcgccggtaacttaatcggaatgagtacggtgatcaactccggcgccggaatc  1002300                                                                                      <------ZmHOX2a(1)                                                                                  <------NtERF2                                                                                 ------>NtERF2                                                                                <---------ANAC46                                    <------NtERF2                               <---------ANAC58                                   --------->LBD16                              <---------ANAC58                                  <---------DEAR3(1)                           <------NtERF2                                  <---------ANAC46                             --------->ATERF1(1)                                 --------->ATERF1(1)                          <---------ATERF1(1)                                 <------NtERF2                                ------>NtERF2                      <------ZmHOX2a(1)      <------ZmHOX2a(1)                --------->ABI4(2)    <-               ------>ZmHOX2a(1) <---------LBD16                             --------->ALFIN1      <-             ------>ZmHOX2a(2)  <---------RAP2.3(1)                       <---------DREB2C(2) <------             ================HOX2a_HOX2a--------->ALFIN1                  <---------DEAR3(1)---------            <---------YAB1      <---------ORA47(2)                      --------->MYB52(1) --------->ARR11(3)         <---------YAB1        <---------RAP2.3(2)                     ----------->HVH21 <---------HSFC1(2) ->ARR14(2)<---------ARR11(3)  <---------RAP2.3(3)                     ----------->TGA1  --------->HSFC1(2) --ARR14(2)--------->ARR11(3)  <---------DEAR3(1)        <---------At4g35610 <---------DEAR3(1)<-----   gaagcataggtatgatcctagagaggaagcgagacggcggagttggaggagagggatgcagaagatgaaatggatgacggtggcgcgaggaagtatctcg  1002400                              ------>NtERF2                              ----------->RAV1(1)                             <---------ATERF1(2)                             ----------->HVH21                             --------->DREB2C(2)                             --------->RAP2.3(3)                             --------->ATERF1(2)                             --------->DEAR3(1)                             <---------ETT(1)                             --------->DEAR4(1)                             --------->At1g77200                            --------->ERF1                            --------->ORA47(2)                            --------->RAP2.3(1)                           --------->At4g35610                           <---------ATERF1(1)                         ------>ZmHOX2a(2)                        --------->ARR14(1)                       <---------ARR11(3)        ----------->RAV1(1)--------->LBD16     --------->ANAC46  --------->ARR14(2)     --------->ANAC58  --------->ARR11(3)     --------->ANAC55(1)<------ZmHOX2a(2)     --------->ANAC55(2)--------->CCA1(2)              ------>MYB83     --------->ANAC58  <---------ARR14(2)              ------>MYB46(1) ----------HVH21       --------->AGP1 --------->MYB52(1)<---------ATHB12                     -------- ------GAMYB          --------->GLK1(1)              --------->MYB46(3)                    *TSS ---LBD16             <---------GLK1(1)              <---------MYB55(2)        ---------->ID1<------- -------------->TaNAC69(2) ------>NtERF2 <-----------RAV1(1)        --------->ANAC46 <---------ICU4 ----LBD16           ----------->ARR10<-----------GT1--------->AtMYB61         ---------->ARF1     --   gggttacacgcaacatattgccagagatccgccgacagattaactgttgtctccaccaatcgactattcaacaccattcttgtctcaaaattgcctcgtg  1002500                                                     <------ZmHOX2a(1)                                                    ----------->GT1                                             ---------->DOF2                                          ------>ZmHOX2a(2)                                          ==================HOX2a_HOX2a                                         ===================HOX2a_HOX2a                                        <---------ARR14(2)                         <------------CBF<------ZmHOX2a(2)                      --------->AHL20(2)<---------ARR11(3)                      <---------AHL20(2)--------->ARR11(3)                    <-----------TBP     --------->ARR14(2) ->O2        ---------->ID1             <---------AGP1           --------->YAB1                     < --O2     --------------->AtSPL8       <------ZmHOX2a(1) <------------CBF                          <- ---->ZmHOX2a(2)<----------DOF2     <---------LBD16--------->MYB59           <----------DOF2       --   atcgtgttttgttttgttctttatttatattgcagaactcaggatctaaaagttaggaaaattgcaaacagaaccctctcttttacgaactattcaaata  1002600           <-----------GT1 --------->ETT(2) <---------ETT(2) ------ZmHOX2a(2) --------ARR11(3)       <---------AHL20(2)                                                      ----- ------->ARR11(3)------->TEIL     --------->YAB1             --------->LBD16               --------->ZAT6   agatcgacagttttttctgaatctatttattcactaacataactaaaactattgtttttgacccccaaaaaaactaaaattctaaatactatgacactat  1002700                                                              <---------ANAC58       <---------MYB46(3)                                     <---------ANAC58   <---------AHL20(2)                   --------->AHL20(2)    <---------bZIP60(2)  <---------AHL20(2)            <---------ANAC46              <---------AtLEC2            <---------ARR14(2)  --------->AHL20(2)<---------YAB1   <---------ZAT6--------->YAB1                      ------>ZmHOX2a(2) ------>GT1       --------->YAB1--------->YAB1<---------TOE2(3)                     <------ZmHOX2a(1)   gtaaattaatggttgtcttagtataatcgttgtatcgtagtataaattaacaatgaaaacaatggcatggctcttgttgttgtataggatcgaattctgg  1002800                                     --------->At4g35610                    --------->ZAT14<---------HSFB2a(2)                    --------->REM1(2)<---------At4g35610              --------->MYB52(2)                    <---------ZAT14--------->HSFB2a(2)             --------->TOE2(3)   <---------WOX13(1)    <----------ID1     <------ZmHOX2a(1)     --------->ATHB12      --------->GLK1(2)   tattgactgactagagtttcagtgtagaagacaagtttcagaagaaggagaagaagctatatatgtcttcattagttgaaacttcttaagaatttgcagt  1002900              --------->MYB52(1)         <----------ID1            --------->MYB46(3)           ----------->GT1            <---------MYB52(2)        ---------->DOF2                   <---------WOX13(1)       ----------->GT1            ----------->GT1                    <---------YAB1       --------->ANAC58          --------->DAG2                  <---------GLK1(2)       --------->ANAC58         ---------->DOF2              <---------MYB52(1)     ---------->DOF2       <---------------AGL15            <-------GAMYB  ------->TEIL    <------ZmHOX2a(1)      --------------->AGL15           <---------MYB46(3) <-----------RAV1(2)      ----------------->AGL2           --------->MYB55(2) <---------LBD16          ----------------->AGL3           --------->MYB52(2) <---------MYB52(1)  ---   gtttcaggaaagtaacaaacagagaacacccataaaaagtaaaaggaaaaacaaatctcggtcgttagattatgatggacgttactcgttttgaaggaaa  1003000  Previous    Next  AGI:  At3g03890.1    Description:  FMN binding. similar to FMN binding [Arabidopsis thaliana] (TAIR:AT3G21140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23477.1); contains InterPro domain FMN-binding split barrel, related (InterPro:IPR009002); contains InterPro domain Heme iron utilization protein, pyridoxamine 5' (InterPro:IPR014599); contains InterPro domain FMN-binding split barrel; (InterPro:IPR012349); contains InterPro domain Pyridoxamine 5' (InterPro:IPR011576) Range:  from: 999474    to: 1002491    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g03900.1    Description:  adenylylsulfate kinase, putative. similar to APK (APS KINASE), ATP binding / kinase/ transferase, transferring phosphorus-containing groups [Arabidopsis thaliana] (TAIR:AT2G14750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23478.1); contains InterPro domain Adenylylsulphate kinase, C-terminal; (InterPro:IPR002891) Range:  from: 1002982    to: 1004278    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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