Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->At4g35610            <---------MYB59                                              <---------At4g35610           <-----------------AG                                              <---------ZAT14               <-----------------AGL1                                              --------->ZAT14   <---------At4g35610   --------->At4g35610         --------->MYB46(3)                --------->At4g35610  --------->At4g35610   <---------At4g35610 ---------CCA1(2)              <---------ANAC58        <---------MYB52(1)   <-----------------AGL2 ------>TGA1a     <-----------GT1   <----------DOF2    <----------DOF2      ----------------->AGL1 ------>O2--------->TOE2(3)    <---------ANAC58    <---------ZAT18     <------ZmHOX2a(1)   tcgtctctgtaacctccatttttctactcgatttcgagctttctcttctgcagagccctttgttttagctggaggatgacccaatttgggctgaatttaa  991700                                                        <---------At5g28300                                                       <-----------GT1                                                       --------->MYB52(1)                                                     <---------WOX13(1)                                                   --------->ATHB12             --------->AHL20(2)                                                  <---------YAB1               --------->ICU4                                                ------>ZmHOX2a(2)            --------->ATHB51                                               <------ZmHOX2a(2)             <--------HAHB4                                              <---------ARR14(3)             <---------ICU4                                              --------->ARR14(2)            --------->ICU4                                              <---------ARR14(2)            <---------YAB1                                              --------->ARR14(3)          <---------ICU4                                              <---------ARR11(3)          --------->YAB1                     <---------ARR14(2)       --------->GLK1(2)          <---------ATHB12   ---------          --------->YAB1                      --------->ARR11(3)       --------->WOX13(1)   <--------          --------->ATHB12                   <------ZmHOX2a(1)    <---------DAG2<---------AHL20(2)         <-------TEIL--------->ARR14(2)    <---------TOE1(3)      <----------DOF2           --------- <------NtERF2      <---------CCA1(2)      <---------TOE2(3)   <-----------GT1 <---------YAB1   ggcctcacatattcataggcccatatatgtttcaaacccaaatttaaggatcttgattaactgtgttacttttcaatcataattaatagaattgagctgt  991800                                                       ----------->RAV1(1)                                                   ------>MYB46(1)                                                 ------->GAMYB                          <------------                                                 --------->AtMYB61                   <---------bZIP60(1)                                                --------->MYB46(3)              <---------ANAC58                    ----------->GT1        --------->TOE1(3)                    <---------ANAC58    - >At4g35610     <-----------GT1            --------->TOE2(3)           <---------WRKY12 --------->YAB1 -At4g35610  ------->TEIL           ---------->DOF2------>MYB83    --------->DAG2    --------->bZIP60(1) >ZAT2  --------->MYB52(1)  ---------->DOF2--------->YAB1         ---------->DOF2   <---------ARR11(3)   ctaaaaaaaaaaacgaatttacctgtaaaacaaagaatgaaagaaccataaccatcccaacaaaaaaaaaaagtcaactatggcatgatatcatattttg  991900                          <---------ICU4                          --------->ATHB12                          -------->ATHB1                          --------->ATHB51                         --------->ICU4                         <---------ATHB51                         --------->AHL20(1)                         <---------AHL20(2)                         <---------YAB1                          --------->LBD16                   --                      <---------AHL20(2)                         ----------->GT1        --------->AHL20(2)                      --------->AHL20(2)                        --------->ANAC58        <---------AHL20(2)                      --------->AHL20(1)                        --------->ANAC58        --------->AHL20(1)                     <---------AHL20(2)          --------->TOE2(3)     --------->AHL20(2)         <--                     --------->AHL20(2)    --------->YAB1       --------->ANAC46    <---------AHL20(2) -----AG          --------->AHL20(2)    --------->YAB1         <---------LBD16   --------->TOE2(3)<-- --------->DOF2  --------->AHL20(2)    --------->AHL20(2)----------->GT1         --------->YAB1   <--   ggaaaagaatttacagaaaataaaaaaattattggaaacaaataataaaaacataaatatagttatacggaaaaaaaattcaatgttaaattttttagtt  992000                                                                                            <--------                                                                                    ----------->GT1                                                                                   <---------HSFB2a(2)                                                                                   --------->HSFB2a(2)                                                                                  ------>ZmHOX2a(2)                                                                                 --------->CCA1(2)                                                                                --------->AGP1                                                                                <---------ARR14(3)           <---------AHL20(1)                                                   --------->ARR11(3)           --------->ARR11(3)                                                   <---------ARR11(3)           --------->ICU4                                                       <---------ARR14(2)           --------->AHL20(1)                                      <---------AHL20(2)      <---------AHL20(2)           <---------ARR11(3)          <---------YAB1              --------->AHL20(2)      --------->AHL20(1)       --------->YAB1                <---------AHL20(2)         --------->TOE2(3)<------ZmHOX2a(2)      ----------->GT1            <---------AHL20(2)            ----------->GT1  --------->ARR14(2) ------------->AGL15             --------->AHL20(2)           <---------TOE2(3) --------->ARR14(3) <- -------ANAC58                  --------->AHL20(2)         <---------ARR11(3)   <---------AGP1  <---- -------ANAC46        <---------ANAC55(2)                  --------->ARR11(3)  --------->RVE1(1)----- -------ANAC58        --------->ANAC55(2)              ---------->DOF2      ---------->DOF2--------->AHL20(2)   tcttgaaaatgaaaatattaagtcacgtttttcatttatttattcttactcacttgcaaaagataatgttaaattagtaaaagatctggaaaatttaata  992100                                                                  <---------AHL20(2)                                                         <------MYB83                                                         <---------MYB46(3)                                                        <---------DEAR3(1)                                                    ------>ZmHOX2a(2)                                         --------->GLK1(2)        --------->AHL20(2)                                      --------->LBD16<---------MYB46(3)                   <---------SPL7                                     --------->HSFB2a(2)--------->ALFIN1               <-----------HVH21                                     <---------HSFB2a(2)<---------AtMYB61             --------->ANAC46      ------------>CBF       <-----------RAV1(1)   <------ZmHOX2a(2)                  --------->O2 -AHL20(2)<---------ATHB12<---------AHL20(2)      --------->ARR14(2)                  <---------O2 --------AHL20(2)        <---------AHL20(2)       <---------ARR14(2)   ----------------->AGL3 -----AHL20(1)           --------->AHL20(2)       --------->ARR11(3)   ----------------->AGL2 ---->AHL20(1) ---------->DOF2     *TSS <---------GLK1(2)<------MYB46(1)            <---------ALFIN1   tttttttcagcaatgaacaaagcagaattaaatggtgctccagaatttgtaagatcgggtggtgctatttaaatccaatatcagaaacacgtcgaacgag  992200                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                             --------                                                                                             <-------                                              <-----------RAV1(1)                            <-------                                           --------->ARR14(2)                               ---------                                           <---------AGP1                                   <--------                                           <---------ARR14(2)                           <---------LBD16                                        --------->HSFB2a(2)             --------->AHL20(2)  ---------                                        <---------HSFB2a(2)            --------->AHL20(2)--------->LBD16                                     <---------ARR14(2)              --------->YAB1    ------>ZmHOX2a(2)                                  <---------ANAC58                 --------->AHL20(2)  <---------LBD16                                  <---------ANAC46      --------->At4g35610           <------ZmHOX2a(2)                   <-------TEIL   <---------ANAC58      <---------At4g35610  --------->AHL20(2) <----               <---------YAB1    ---------->ID1 <---------MYB52(1)--------->YAB1     <---------ARR14(2)           <---------GLK1(2) <----------DOF2 ------>ZmHOX2a(2)   --------->AHL20(2)  --------->ARR14(2)   accaatagagctagcttctgatacatttcgactttggcgtttctcgatctgttgtttctgctcccaaataaaaataaaaaaaaatcggatcggggatttc  992300    ----------->GT1    --------->YAB1 ------>LBD16 ----------->AGL15 ------------->AGL1                                       --------->TOE2(3) ------------->AG                                       <---------ARR11(3) ->GLK1(1)                                           --------->TOE2(3) ---TaMYB80                                        ---------->ID1 --GLK1(1)    <------MYB83                         <---------TOE1(3) >ARR14(2)    <------MYB46(1)                      <---------TOE2(3) <---------TOE2(3) -ARR14(2)   --------->MYB59                      <-----------GT1    <---------TOE1(3)   <-----------GT1 ->TaMYB80   <---------TOE2(3)          <---------ZAT2<---------MYB52(1)            <----------DOF2 -------------AGL1                      --------->ZAT2--------->DOF5.7(2)          --------->TOE2(3)   cccaaatcgtaaaattaggttttgttcttcatttctagccctagcttagttttatcgttatcttattcattaaggtttgattctacctttgtttcgcttc  992400                              <---------ARR14(2)                              --------->ARR14(2)                              --------->ARR11(3)                              <---------ARR11(3)                    <---------MYB52(1)                  --------->ANAC55(2)                  <---------ANAC55(2)                  ----------->GT1               <---------ARR14(2)  <---------TOE1(2)               --------->ARR14(2) ------>ZmHOX2a(1)                     <---------GLK1(2)              <---------GLK1(1)<------ZmHOX2a(2)                        <---------ARR14(2)          <-----------GT1    <------ZmHOX2a(1)                          --------->ARR14(2)  <---------HSFB2a(2)    ---------->DOF2                           <---------ANAC46  =====================================HOX2a_HOX2a                 <---------AtLEC2  --------->HSFB2a(2)  <---------YAB1                             <-------TEIL  ------>ZmHOX2a(1)<-------GAMYB------>ZmHOX2a(2)         <-----------HVH21                      <---  ====================================HOX2a_HOX2a        --------->ANAC46             <---------GLK1(2)   cctcctcgaattttgcaattccgttattaaaggatcctagtttttctggctcttgtactacgtcaagtttcatggattctcgagtttcgattctcttcgt  992500                                      --------->REM1(1)                       <---------ANAC58                    <---------MYB52(1)            <-----------HVH21 <---------ARR14(2)    <---------DAG2      --------->ARR14(2)         <---------ANAC58     --------->ARR14(2)    <----------DOF2     <---------ARR14(2)         <---------ANAC58----------->RAV1(2)    <---------ZAT14      --------->ANAC55(2)        <-----------------------TaNAC69(2)      <---------ZAT18      <---------ANAC55(2) <---------ZAT18       <---------ANAC58         --------->ZAT14   --------->ICU4 --------->ZAT14   <---------DAG2 --------->At4g35610    <---------ANAC58     <---------At4g35610 ------DEAR3(1)    <----------DOF2<---------At4g35610    <---------ANAC58     <---------ZAT2       <-   ctgtgcaatagccgtgtcatgctttacgtctgggtctgcttcatcaccagtggacttttccgtttgcaattacgaattcgagctgtttcgattcgattta  992600  Previous    Next  AGI:  At3g03860.1    Description:  ATAPRL5 (APR-LIKE 5). similar to ATAPRL7 (APR-LIKE 7) [Arabidopsis thaliana] (TAIR:AT5G18120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23474.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 992135    to: 994587    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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