Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->bZIP60(2)                                            --------->O2                                            --------->ANAC58                                            --------->TGA1a                                          <---------TGA1a                                          <---------bZIP60(2)                                          <---------O2                                       ----------->TGA1                                     <---------At4g35610                                     --------->At4g35610                                     --------->ZAT2             --------->ANAC46        <---------ZAT2       --------->CCA1(2)        --------->TGA1a       <---------GLK1(1)        --------->O2--------->ANAC46       --------->GLK1(1)        <---------TGA1a      --------->ARR11(3)        ====================bZIP_bZIP      <---------ARR11(3)        <---------O2--------->ANAC58  ---------->DOF2           <-----------HVH21<-----------HVH21  ========================================bZIP_DOF  ========================================bZIP_DOF --------->YAB1        ===================bZIP_DOF          <---------AHL20(2) ---------ATHB12       <----------DOF2 ----------->HVH21 ------->TEIL                ------->TEIL ------>WOX13(1)       ===============================bZIP_DOF           <-----------GT1         ----   caatcaaagatatccacgtagtccgatttatgtcacgagagctgacgcgtcacattatgcattttttttttttttttacacattatgcatttgattaagc  961600                                                                            <---------AHL20(1)                                                                 <---------AHL20(2)           <----------DOF2          <---------YAB1     --------->AHL20(2)   --------->AHL20(1)      -     <-----------GT1    ---------->ID1            --------->AHL20(2)        <---------AHL20(2)   <--- ----->GLK1(2)<-----------GT1      <-----------GT1<---------AHL20(2)        --------->AHL20(2)   ----   atctgtttaacttcttttaccattttgtccctcaaattttcattccctctaattaaaaaaaatagaattaatccacaataaattcttgaaaaactgatga  961700                                                                                                  <--                                                                                                <----                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             ========                                                                                             <-------                                                                                             --------                            <----------ID1                                                   <-------                  --------->ATHB12                                                           --------                  -------->ATHB1                                                             --------                  --------->ATHB51                                                        -----------                 <---------ATHB51                                                         -----------                 --------->AHL20(1)                                                     ----------->RAV1(2)                 <---------YAB1                                                     <---------DOF5.7(2)          <-----------GT1 ------------------------>ANAC81                          <---------WRKY12 ---------->RAV1(1)       <---------------AtSPL8                          ----------->HVH21  <------- ------bZIP60(1) <---------AHL20(2)                             <---------YAB1     <---------WRKY38(1) ----->bZIP60(1) --------->ICU4         --------->MYB52(1)    --------->YAB1--------->ARR11(3) ------   tgccacagaaattcacaaaattattgaaaggctacaaaaaaaaaacagagaagtttcagacatatgatgactgtgtatgaccttgtcaacgtctgacgtg  961800             <-------MYC4             ------->MYC2             <-------PIF5    --------->bZIP60(2)    --------->ANAC46   ------->MYC2   <-------MYC4   ------->MYC3     --------->MYB52(1)   <-------MYC3    --------->ICU4   <-------MYC2  --------->YAB1            <---------ANAC58 -------ANAC46 <-----------HVH21           <---------ANAC58                                    <----- -------HVH21------->MYC4                  <---------ANAC46                                   ------- --ANAC58    <-------MYC2                  <---------ANAC55(2)                                <------ --ANAC46    ------->PIF5                  <------MYB83                                       ------- --ANAC58    <-------MYC3                  --------->ANAC55(2)                                ======= --ANAC55(2) ------->MYC3                  <------MYB46(1)                                    ------- --TGA1a    <---------O2                  --------->MYB111(2)                                 ------- ======================================bZIP_DOF                                               <------ --bZIP60(2)--------->TGA1a               --------->MYB46(2)                                  ------- ->ANAC55(2)===========================bZIP_DOF                         <---------CCA1(2)     ------- --ANAC55(1)<---------TGA1a               --------->MYB111(1)--------->CCA1(2)                ------- ->TGA1a    --------->O2                  --------->MYB59   --------->ARR14(2)                <------ ->O2       <---------ANAC55(2)          <---------MYB55(1) --------->ARR11(3)                ------- >HVH21   <---------ALFIN1    --------->ANAC58              <---------ARR14(2)                ------- >TGA1 <-----------GT1        --------->ANAC58              <---------ARR11(3)         <----------DOF2 --O2<-----------HVH21      ---------->DOF2<---------ANAC55(1)    ------->TEIL         ============== --->ALFIN1 --------->ANAC55(2)         <---------MYB52(1)  --------->ARR11(1)    --------->LBD16   tcgcacatgtcaccacgtgtcataacgatgtaaagcaaaccagttaggtgtctggagagagagatatggacttcatctcttctccgagtctttagcacgt  961900 ------HVH21 -->O2---------->DOF2 ---bZIP60(1) -->ANAC58                                                               ------>ZmHOX2a(2) ================bZIP_DOF                                               <---------GLK1(1) -->ANAC55(1)                                                           <------ZmHOX2a(2) -->TGA1a                                      <---------At5g28300      --------->GLK1(1) ---TGA1a                                  <---------ICU4              <---------ARR11(3) -->bZIP60(1)                           --------->TOE2(3)              <---------ARR14(2) -->bZIP60(2)                           --------->YAB1                 --------->ARR14(2) -->ANAC58                    <---------MYB52(1)                       <---------ARR14(3) ---ANAC55(2)                --------->LBD16  <-----------GT1          --------->ARR11(3) -->ANAC55(2)      <-----------TGA1  <---------CCA1(2)                --------->GLK1(1)<---------CCA1(2) -->ANAC46<------ZmHOX2a(1)  --------->At5g28300           <---------MYB52(1)       --------->LBD16 ===bZIP_DOF      --------->YAB1  <-----------GT1     <-----------GT1 <---------GLK1(1)<---------MYB52(1)   cacaacttcaaaggactctatcgtcattcgccgtaatttctatcttaattactgtattacccttaggctcggagatctctcttctccccgtttctctctc  962000                                                          --------->KAN4(2)                                                         <---------KAN4(1)                                                         <----------TaMYB80                                                         --------->KAN4(1)                            --------->ANAC58            ---------->TaMYB80                            --------->ANAC58            ----------->ARR10                            --------->ANAC46            --------->ARR14(2)                   <----------DOF2                   ----------->GT1                   <---------DAG2      <---------ANAC58 <---------ARR14(2)               <---------GLK1(2)       <---------ANAC58 <---------KAN4(2)    *TSS    --------->YAB1<-----------GT1   <---------LBD16          <---------YAB1                 <   tctgtctggctcattcagaaacttttttatacgcctctgtttcttatggggaagagggtatattctctgttttgattcgcttctgtcttaacacattgaa  962100                         <----------DOF2             >>>>>>>>>>>>>>>>>LFY            --------->GLK1(2)          --------->HSFC1(2)          <---------HSFB2a(1)                                       <---------AHL20(2)          <---------HSFC1(2)      ------>ZmHOX2a(1)               <----------DOF2          --------->HSFB2a(1)<-----------GT1          --------->AHL20(2) -----------GT1      <---------ZAT18     <----------DOF2  <-----------GT1                      ------   attttccatagaagattccattgtgctcttttaatcctcttctctttctctctgttttaaatacctgtctttaatcgcttctctctatctctctctcttg  962200                             ----------->GT1                            ----------->GT1                          --------->MYB52(1)                          <---------DOF5.7(2)                         ----------->HVH21          --------->ATHB12                       <---------At4g35610         <---------AHL20(2)                       --------->ANAC55(2)         --------->AHL20(2)                       --------->ANAC46            --------->AHL20(1)                      <---------TOE1(3)            <---------AHL20(1)                      <---------TOE2(3)        --------->AHL20(2)                     <-----------RAV1(2)       <---------AHL20(2)                <---------------AGL15         <---------AHL20(2)             <---------YAB1 ----->GT1  --------->GLK1(1)------->GAMYB <---------AHL20(2)             <---------YAB1   ttaaatctcatcggagttcaatttcaggtaacggaaaattagtttttatttattttattggtttctctcttgtctgattattttaaactcaattccagtt  962300                                                                                               ------                                                                                    --------->LBD16                                                                                   <---------ANAC58                                                                                   <---------ANAC55(2)                                                                                   <---------ANAC46                                                                         ----------->GT1    ---------                                                                    ---------->DOF2--------->ANAC55(2)                                                                   --------->LBD16 <---------ANAC58                                                                  --------->HSFB2a(2)   <----------DOF2                                   <---------TOE1(2)              <---------HSFB2a(2)<---------MYB52(1)      <-----------GT1            --------------------->WRI1  <---------At4g35610   <---------ANAC55(1)   <---------ICU4                <----------DOF2             --------->At4g35610  <---------LBD16 <--   tttgatttttacccaaaaaaaacagttttttttttctttggttctattgaagtctcgaattggagcttccgaaagttgtaaatttccgtgatttatgtat  962400                                                        <------ZmHOX2a(2)                                                       <---------ARR14(2)                           - <---------HSFB2a(2)                            <---------ANAC58                               <----- --------->HSFB2a(2)                            <---------ANAC46      <---------MYB52(1)     <------- ->TEIL ------->TEIL                            <---------ANAC58 <-----------GT1         <---------ZAT18 >ANAC55(2)                              xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             <---------ANAC58 ---------GT1                           <---------ICU4 --------->ARR11(3)               <---------ANAC58   tttctcgatgaattttgaacattttctatcgaattgtgctactcattgtgtcttggagatcgagttttatctgtttgccattctcgatttgtgtgctttg  962500  Previous    Next  AGI:  At3g03790.1    Description:  ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein. similar to regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G60870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39844.1); similar to Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Medicago truncatula] (GB:ABD28429.2); similar to putative UVB-resistance protein UVR8 [Oryza sativa (japonica cultivar-group)] (GB:BAC07425.1); contains InterPro domain Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); contains InterPro domain BTB/POZ fold; (InterPro:IPR01133 Range:  from: 962004    to: 968156    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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