Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ------>ZmHOX2a(2)                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)                                                                                    <---------ARR11(3)                                                                                    <---------AGP1                                                                                    --------->AGP1                                                                                    --------->ARR11(3)                                                                          <---------ALFIN1                                                                         --------->ZAT18                                                                         <---------WRKY12                                                                         <---------WRKY38(1)       --                                                         ------->TEIL    <---------ZAT18         <---      --------->TOE1(2)                              <---------------AtSPL8         <---------ARR14(3) ----->YAB1                                  <---------AHL20(2)        <---------TCP16(1)      <----- ------ICU4                                  --------->AHL20(2)        --------->ARR14(2) <---------ARR11(3) -----YAB1                             --------->YAB1--------------->AtSPL8         --------->ARR14(3) -->YAB1  ---------->DOF2           --------->YAB1 <---------AHL20(2)  <---------PCF5<------ZmHOX2a(2)   catcaaaacctgcaaagagagagacacatttcattcaagaatcacatttatatataatgtacttacaaaacagggtccactctcaagatcttgatatttt  948600                                               --------->YAB1                                            --------->WOX13(1)                        --------->LBD16                                          <---------ATHB12                           <---------HSFC1(1)                                  --------->TOE2(3)                                  <---------HSFB2a(2)          --------->DOF5.7(2)   <---------ARR14(2)                        <---------AtLEC2         --------->TOE2(3)      --------->ARR14(2)                        <---------ANAC58   <----------DOF2              <---------ARR11(3)                        <---------ANAC58          <   <---------DAG2               <-----------ARR10                   <---------YAB1   --------->HSFB2a(2) ------->MYB46(3)               --------->GLK1(2)                <---------YAB1  --------->GLK1(1)  - --------GT1                   <---------ARR14(1)          --------->AHL20(2)<-------MYC3           < ----AHL20(2)                  <---------GLK1(2)           <---------AHL20(2)------->MYC3       <----   aaccactttctcgttaatgcattaaacagaagagaatcttagaaatcaatcttcaaactaaaaaaatatgatttttgcatgtgaattccagaaaaacagg  948700                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -            ------->MYC3                                                                           <-            <-------MYC3          --------->ANAC46                                        --------->AHL20(1)          ------->MYC3        <----------DOF2                                             <---------AHL20(1)          <-------MYC3<-----------ARR10                       <------ZmHOX2a(1)           --------->AHL20(2)       <---------ALFIN1     ------>ZmHOX2a(1)                --------->ANAC58             <---------AHL20(2) ---------ARR11(3)    <---------ARR14(2)                     --------->ANAC58            --------->AHL20(2) -------->ARR11(3)    --------->ARR14(2)                     --------->ANAC46        --------->AHL20(2) -----------ARR10     --------->GLK1(2)             ---------->DOF2<----------DOF2   <---------AHL20(2) --ZmHOX2a(1)        <---------GLK1(2)    --------->AtLEC2<-------TEIL              --------->AHL20(2)   aagaactcaccacatgtgttacagaatctcctctttaagacaccttgcaagaagaaaagatgcaggaaacttttgagcacaagagattaaattttatttt  948800              <------MYB46(1) ----->ZmHOX2a(1) ---------HSFB2a(2) -------->HSFB2a(2)                              <----------ID1      <---------At4g35610 -------->LBD16      <---------At4g35610       ---------->DOF2  <----------DOF2 --------LBD16<------MYB83         ------------------------>ANAC81   --------->At4g35610   tcctggaaacaaaatttggtttcatcagagtaagaagaatgagaaaatgaaaagacaaatcgtttcctttgagatgaagaaatacctctgcaaacttatg  948900                                                                                              ------>ZmHOX2a(1)                                                                                          --------->ARR11(3)                                                                                          <---------ARR14(2)        <---------AtLEC2                  --------->DAG2                             --------->ANAC58     --------->At5g28300         <----------ID1                   ---------->DOF2    --------->ANAC58   <------------AtMYB77      ---------->DOF2               ---------->DOF2 ---------->DOF2<---------ARR11(3) --------->MYB52(1)    <---------AHL20(2)---------->DOF2  <---------AHL20(2)--------->DAG2--------->ARR14(2)   aagtaactgtgaatggaatatcgattttatctaaagaaacaaaaaaagtagcaacttgatttaaagaagaaagtgagaaaagttcccaagaaaatcctct  949000                                                               <---------ARR11(3)                                                               --------->ARR11(3)                                                              <---------CCA1(2)                                                             <---------AHL20(2)                                                            --------->YAB1            <---------ARR14(2)               ------>ZmHOX2a(1)                        --------->ICU4                --------->ARR14(2)           --------->ARR14(2)                *TSS       <---------YAB1--------->YAB1 <------ZmHOX2a(1)       ---------->DOF2                   --------->GLK1(2) <---------YAB1   --------->AHL20(2)   ----   --------->CCA1(2)    <----------DOF2 <---------GLK1(2)<---------ICU4  --------->YAB1    <---------LBD16   gtaagagatgaaagttcctcaaggagctttaaaaacattcaagattccttcacgagtgattattatatcttataagaataaaacagaggatactctggga  949100                 <---------DAG2            <------------MYB.PH3(2)            <---------MYB55(2)            <---------MYB111(2)            --------->MYB46(3)            <---------MYB52(2)          ----------->RAV1(1)          ------>MYB46(1)          ------>MYB83        --------->AHL20(2)       --------->ANAC46<---------AHL20(2)                            --------->AtLEC2     --------->TOE1(2)     <-----------GT1  <---------AHL20(2)                  ----------->GT1                --------->AtMYB61  --------->YAB1 <----------DOF2     ------------>CBF  --------->GLK1(2)                --------->MYB46(3) -------->CBF------->GAMYB    <---------AHL20(2)      <---------GLK1(2)                -------->P  --   acaatattaacccaacaaactttttttattttttaaatagacaataaacaaaaacaaattctgtaaaatcaatgcaaaaacattttagcaaccatacgat  949200                   --------->MYB46(3)                                      --------->AHL20(2)                 --------->MYB52(1)     ------>ZmHOX2a(1)               --------->YAB1        -------           <---------At4g35610  <------MYB46(1)                      --------->MYB52(1)      --------       <-----------HVH21        <------MYB83             <---------ANAC55(2)                 <-------  <---------AHL20(2)           --------->MYB59       <-----------HVH21  --------->TOE2(3)  --------->YAB1 --------->GT1   <---------DOF5.7(2) ------>ZmHOX2a(1)   --------->ANAC55(2)         <-----------GT1   ttagtaaattgtcagtggctaacgacagagagtttggtcctcctctctaagtctccatcacgagatgaagacaacgataaattctttttacaaaaataat  949300                                                                                       <----------ID1                                                                                       ----------->GT1                                               --------->ARR11(3)         <-----------GT1         ---                                               --------->GLK1(2)    ------->TEIL      --------------- -->AHL20(2)                             --------->AHL20(2)       <-------TEIL       ---------->DOF2 ->AHL20(2)                   <---------AHL20(2)                <-------MYC3     <---------AHL20(2) --AHL20(2) --------->YAB1<---------GLK1(2)--------->YAB1       ------->MYC3     --------->AHL20(2)--   tttaaaacaaacaaacaaaatagaaatagaatttttttgtccaaaaaataatcttgtaagtgttcacatgcatttttaacaaattaaaaaagaaaaaaaa  949400                                                                                        --------->AHL20(1)                                                                                       --------->AHL20(2)                                                    <---------ANAC58                   <---------AHL20(2)                --------->ALFIN1                    <---------ANAC58                  <---------AHL20(2)         ----------->RAV1(1)    <-----------GT1     <-------GAMYB                 --------->AHL20(2)     --------->GLK1(2)----------->HVH21            <---------MYB46(3)           ----------->GT1     <---------ARR14(2) <------NtERF2         <---------YAB1                  ---------->DOF2     --------->ARR14(2)------>NtERF2        <---------AHL20(2)            <---------ZAT18      ------    <---------ARR14(1)--------->DEAR3(1)<----------DOF2                   --------->ZAT14    <------- ------->DOF2  <---------ARR14(2)    --------->ARR11(3)                   <---------ZAT14  <---------AHL20(2) --------->ANAC81    --------->DEAR3(2)------>ZmHOX2a(2)            <-----------GT1   --------->AHL20(2) ------->DAG2  --------->ARR14(2)    <---------ARR11(3)           <---------AHL20(2)  <---------AHL20(1)   aaaagcgaatccaacagggtctggccgacgtttttttctgatctttttatttttggttgtctcactatttatacagtacacaaagtaaattattttatca  949500  Previous    Next  AGI:  At3g03770.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G14390.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80270.1); similar to Protein kinase [Medicago truncatula] (GB:ABD28527.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67481.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 945142    to: 949045    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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