Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------------AGL15                      --------->YAB1                                         --------->MYB52(1)                   <-----------GT1                                          <---------WRKY38(1)          ------>ZmHOX2a(2)                                               <-----------HVH21         <------ZmHOX2a(2)                                           --------->MYB46(3)        <---------ARR11(3)                  <----------DOF2    --------->HSFB2a(2)               <---        --------->ARR11(3)          <-------TEIL               <---------HSFB2a(2)               ----   cttattctaagatcgctgtttttaccataagaaataagtccatgagctttgtaatacatagacatctcgaaaccacagtcaccggttctcacaaacttca  935900                                                                                                    -                                   --------->GLK1(1)                                                -                                 <------ZmHOX2a(1)                                                  <                         --------->ANAC58                                                           <                    --------->LBD16<---------GLK1(1)                                          <------ZmHOX2a(1)                   <---------HSFB2a(2)                           ----------->GT1            ---------      --------->WOX13(1) --------->ANAC58                <-------TEIL                       --------- ------At4g35610   --------->HSFB2a(2)          --------->AHL20(2)    --------->GLK1(2)     --------- ----->At4g35610  ----------------->AGL1      ----------->GT1  --------->CCA1(2)        --------->YAB1   tctgcaatccatcaattgattccagagacggaagaggaattctctctcgagtaaatagattcaagagatgaaaatcagttttatggtctaacataaggaa  936000          --------->HSFB2a(1)          <---------HSFB2a(1)      --------->LBD16     --------->HSFB2a(2)     <---------HSFB2a(2)    <---------LBD16   --------->MYB52(1)   -------->P                                              <---------ANAC46 <---------MYB52(2)                               ------>ZmHOX2a(2) <---------MYB111(2)                              =====================================HOX2a_HOX2a <---------MYB55(2)                              <------ZmHOX2a(2) --------->MYB46(3)                              --------->GLK1(1) -------->ZAT2   --------->ANAC58                <---------GLK1(1) -------->At4g35610   --------->MYB46(3)        <---------ARR11(3) ---------At4g35610 --------->MYB52(1)          --------->ARR11(3)                              ----- ---------ZAT2   --------->ANAC58            --------->LBD16                      <------ZmHOX2a(2) >ANAC58--------->ARR14(2)   ------>ZmHOX2a(1)  <---------ARR14(3)              <------ZmHOX2a(1)  -- >ANAC58<-----------ARR10    ===========================HOX2a_HOX2a    --------->YAB1           ----- >ANAC46<---------ARR14(2)   ============================HOX2a_HOX2a  <---------YAB1            -----   ccagctaccggaacttgccaaacaacgactcctaaccatatcaaacccgagatctcttattgtgtatgaactatgatcacgaggatcaattgacttacac  936100          <<<<<<<<<MYB2        <------MYB46(1)                           <---------MYB46(3)        <------MYB83                              <-----------RAV1(1)        <---------MYB46(3)               ------>ZmHOX2a(2)    <---------MYB46(3)  <---------MYB52(1)      <---------At4g35610 ---->ANAC46          --------->MYB52(2) ===============================HOX2a_HOX2a ----->TEIL          <-------TEIL  =============HOX2a_HOX2a                --------->ATHB12 ---->ANAC58     <---------TOE1(2) <------ZmHOX2a(1)             ------>ZmHOX2a(1)  --------->At4g35610 ---->ANAC58  <-----------GT1---------->DOF2    --------->At4g35610     <---------AtLEC2   gaatcgttgttggttttcacatgttcgtttggaaagaggatgatccatggagctgttggatttgttcctccaatgcatgatttcgaagcggaataccata  936200                                         <---------ANAC58                               ---------->DOF2                                      <---------ZAT2                         --------->ARR14(2)                                         <---------At4g35610                         <---------ARR11(3)                                         --------->At4g35610                         <---------ARR14(2)           ------>MYB83        --------->ANAC58        <--                         --------->ARR11(3)           ------>MYB46(1)     --------->ANAC58        <--                         --------->GLK1(2)           --------->WOX13(1)   --------->ANAC55(2)     <--                     --------->YAB1      <---------ANAC58             <------ZmHOX2a(1)           <--   ctgaagaaacacatctagctcgatgaaaatctacaaagctcaagcgttccaagaccaatctaaccaagtccaggacaagtattggctgcttcgcatcgtt  936300                                                           --------->ANAC58                                                           --------->AtLEC2        <-----------RAV1(1)                                --------->ANAC58     <-----------GT1      --------------------->WRI1                        --------->WRKY18(1)  ----------->TBP    <----------DOF2                                  --------->ANAC58      --------->AHL20(2) -------ANAC46                                       --------->ANAC58      --------->YAB1 -------AtLEC2                  <<<<<<<<<TBF1       <---------At5g28300    <---------AHL20(2)<------- -------ANAC58              ------>ZmHOX2a(1)     ----------->HVH21  --------->TOE2(3)       <------- -------ANAC58         <---------At4g35610       <-----------HVH21   --------->TOE1(3)    <----------DOF2   gcatgtctttttgttggaatcgctcatctccttcttcttctgtttcttctgtgtcacggccaagcacaaaaccctaattatataacgcttccctttcgtt  936400                                                                                <---------ANAC55(2)                                                                                <---------ANAC46              ------------>CBF                                            <---------AHL20(2)           <---------ATHB12          <---------TOE2(3)                    <---------AHL20(1)    <----       <---------MYB59              <-----------GT1                       --------->AHL20(1)    <----   --------->DEAR3(1)          <---------AHL20(2)        <----------DOF2  --------->AHL20(2)    -----  --------->At4g35610       <------------CBF          ---------->ID1--------->TOE2(3)<---------AHL20(2)  <---------At4g35610      --------->ATHB12          <-----------GT1--------->YAB1   --------->AHL20(2) --ANAC58------>MYB83     <---------YAB1  <---------AHL20(2)  <-----------GT1 --------->AHL20(2)----- --ANAC58------>MYB46(1)  <---------AHL20(2)   <---------AHL20(2) <---------ARR11(3)----------->TBP<-   tctcagcgacctaatcaacaatttgtatattattgaattaacatattatttgatttttccttttaaactatcttaataaattacttataaattacaaata  936500        <---------AHL20(2)        <---------AHL20(1)        --------->AHL20(2)                    ------>ZmHOX2a(1)   ------>ZmHOX2a(1)                   <------------CBF  --------->TOE2(3)                  <---------ARR11(3) -----AHL20(1)                       <---------AHL20(1) -----ARR11(3)                       --------->ARR11(3)                      <-----------TBP ---->ARR11(3)                       --------->AHL20(1)                    <---------------AGL15    < ---->AHL20(1)  ------>ZmHOX2a(1)  <---------YAB1    --------->ANAC46     >>>>>>>>>MYB98            - ----------GT1 <---------MYB59     <---------TOE2(3)--------->LBD16   <----------DOF2             <--   ttttccttattttatttcctaattcttgattcaaattaagatattgtcctgttccacgattccatcttcactctttaacatatatagttttttttttaga  936600                                                                 ------>ZmHOX2a(1)          --------->ZAT14                                       --------->TOE2(3)         <---------REM1(1)            --------->YAB1      <---------ICU4           <----------DOF2   <---------YAB1             <---------AHL20(2)      --------->AHL20(2)           <---------DAG2 ------ZmHOX2a(2)             --------->AHL20(2)      <---------AHL20(2)<---------ANAC58    <-------- ----------->CBF            --------->AHL20(2)       --------->AHL20(2) <---------ANAC58    --------- ----ZmHOX2a(1)------------>CBF      <---------YAB1<----------DOF2    <---------ARR11(3)   --------->AHL20(2)   ggatcaatatagtgtagcccaatttgtcaaatttatattttcataacattttccttttaattagttcctcaatttcttactaaaacttttccatttaatt  936700                        --------->GLK1(2)                        --------->ARR14(2)                        <---------ARR14(2)                     --------->LBD16                    --------->HSFB2a(2)                    <---------HSFB2a(2)               <---------ANAC58                       <---------DAG2         <---------AHL20(2)                           <----------DOF2        <---------AHL20(1)                         ------>MYB46(1)       <---------ANAC58        --------->AHL20(2)            --------->MYB52(1) <---------AtMYB61<----------DOF2        <---------AHL20(2)    <---------MYB46(3)   ------>MYB83          <---------ANAC58        --------->AHL20(1) <---------ANAC46      <---------MYB59         <---------ANAC46        --------->ARR11(3) <---------ANAC58     --------->ANAC46      <--------P        <---------ARR11(3) <---------ANAC58 <----------DOF2         <---------MYB46(3) -AHL20(2)     <---------ANAC58    <---------YAB1--------->MYB46(3) --------->ATHB12 >AHL20(2)   <-----------GT1--------->LBD16 <---------DAG2    <------NtERF2                        <-   tagtctgaaatatattttcgttcccgaatccgtggttatcaaacggctttacccaacttttggtggcaaatggttgctttgaagttgaaggctgtcgagt  936800  Previous    Next  AGI:  At3g03730.1    Description:  F-box family protein. Identical to Putative F-box protein At3g03730 [Arabidopsis Thaliana] (GB:Q9SRV0); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G12820.1); similar to At3g03730-like protein [Arabidopsis lyrata] (GB:ABY60296.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 935146    to: 936327    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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