Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->YAB1                                                     <--                            --------->YAB1                                                    -------                         <---------------AGL15                                               <-------                         <----------DOF2                                                    <--------                         --------------->AGL15                                              <--------                         --------->TOE2(3)                                              --------->O2                        <---------ICU4                                                  <---------O2             <---------ANAC55(2)                     --------->YAB1                     <---------TGA1a ---------YAB1   --------->GLK1(2)              --------->ZAT14                         --------->TGA1a >TOE2(3)    --------->ANAC55(2)----------->GT1<----------DOF2----------->GT1 ------>ZmHOX2a(1)   ---   ttatcaaacttcatcacataatctaatctttaataagaaaaaaacgtctctttactcataagcttagtaaaatttgaatcctttgaactcacttgagtga  880100                                                                             <---------MYB46(3)                                                                            <---------AtMYB61                                                                            --------->ALFIN1                                                                         --------->ALFIN1                                                                         <---------AtMYB61                                                                   --------->ALFIN1                                                                  <------NtERF2                                                                  --------->ATERF1(1)            <---                                                                 --------->LBD16        <------MYB46(1)                                                                <---------ANAC46        <------MYB83 -------ARR11(3)                                                <---------ANAC58     <---------MYB52(1) ---->HVH21                                                     <---------ANAC58   <---------ANAC58 --WOX13(1) --------->WRKY38(1)                      --------->ZAT14    <------ZmHOX2a(1)        ---- -ANAC58  --------->YAB1           <-----------RAV1(1)         <---------LBD16     <---------ANAC58 -ANAC58 --------->ICU4            --------->ALFIN1  <---------ZAT14  --------->ALFIN1 <---------AtMYB61 ------>ARR11(3)      ----------->HVH21          ----------->RAV1(1) <------ZmHOX2a(1)<---------MYB55(1)   catcttcggcaatgttgactgtctctgactcagcaatgtgttgctcttcagccacagtagtgactggcggaggaggaggtggtttccgtttggttttgga  880200                                         --------->DEAR3(1)                                        --------->ATERF1(1)                                        <------NtERF2                                       ------>NtERF2                                       <---------ATERF1(1)                                      --------->RAP2.3(3)                                      --------->DEAR3(1)                                     --------->DEAR3(2)                                     --------->RAP2.3(1)                                     --------->ORA47(2)                                     --------->ERF1                          <---------ANAC46           <---------ARR11(3)                    --------->ARR14(2)--------->DREB2C(2)                    --------->ARR11(3)--------->RAP2.3(2)                    <---------ARR11(3)----------->HVH21          ----------->HVH21             <---------MYB52(1)      --------->RRTF1(1)      --------->GLK1(1)            --------->LBD16--------->LBD16------>NtERF2      <---------GLK1(1)           --------->HSFB2a(2)       --------->ATERF1(1)<---------LBD16           <---------HSFB2a(2)       <------NtERF2   <---------ARR14(2)          <---------LBD16 --------->HSFB2a(2)        --------->ARR14(2)      <---------ANAC58    <---------HSFB2a(2)        --------->ARR11(3)                         -----      <---------ANAC58   <---------LBD16--------->SPL7--------->CCA1(2)                  --------->YAB1 ------GLK1(1)      <---------ARR14(2)--------->At1g77200 --------->LBD16              --------->GLK1(2) ----->GLK1(1)     <------ZmHOX2a(1)<---------RAP2.3(1)--------->MYB52(1)---------->DOF2 <---------ICU4   tttcgatttcgttccggtagaggattttccggagatagcgccgacgacgaaggaagataccggagttctgacagccaaagaagatgaagaatcatggtga  880300                                                                    <---------TOE2(3)                                                            ------->GAMYB                                                          >>>>>>>>>MYB98                                                         --------->MYB52(1)                                                         ------>MYB46(1)                                                         ------>MYB83                             ---                                                        --------->MYB55(1)                        ---                                                        ----------->HVH21                       -----                                                       <---------MYB59<------ZmHOX2a(1)       -------                                                       <---------MYB52(2)                     -------                                  <---------ZAT14      <---------MYB46(2)                   ---------                                  --------->ZAT14      --------->AtMYB61                    --------- ----->DOF2                      --------->ALFIN1      <---------MYB111(1)              <------ZmHOX2a(1)   aaggagaagagtgagagtttcgcagtactgaaacggtgtagtttagatgttattcgacctaacggagactgaggaagaagacggagcgaaggagacgcga  880400                      <----------DOF2                                                            <---                --------->ATERF1(1)                                                              ----                <------NtERF2                                                                <-------               ------>NtERF2                                                                ---------               <---------ATERF1(1)                                                        <---------O2               --------->LBD16                                                            --------->O2              <---------ATERF1(2)                                                         --------->TGA1a              --------->DEAR3(1)                                                          <---------ANAC58             --------->ATERF1(1)                                                          <---------TGA1a             <---------LBD16                                                              <---------bZIP60(2)             <------NtERF2                                                                <---------bZIP60(1)             --------->RAP2.3(1)                                                          <---------ANAC55(1)            ------>NtERF2                                                                 --------->bZIP60(1)            <---------ATERF1(1)                                                           <---------ANAC55(2)            <---------RAP2.3(1)                                                           <---------ANAC58         <-----------HVH21                                                                --------->ANAC55(2)        <---------ANAC58                                                                  <---------ANAC46 ------>ANAC58<---------DEAR3(1)                                                         ----------->STF1 ------>ANAC58--------->ATERF1(2)                           <---------AHL20(2)           <----------- ----->DOF2<---------DEAR3(1)     <------MYB46(1)          --------->AHL20(2)           <---------TGA2(2) -->ANAC58 --------->DEAR3(1)     <------MYB83 <---------------AGL15--------->AHL20(2) ----------->TGA1 -->ANAC58--------->ATERF1(1)    <---------TOE2(3)    ----------->GT1          =====================bZIP_DOF >ANAC58--------->ANAC46         --------->MYB59     *TSS  <---------AHL20(2)  ---------->DOF2   ---- >ANAC58<---------ANAC58  <---------TOE2(3)   <-----------GT1   --------->AHL20(2)     ----------->HVH21   aagccattttccgtcgccggcgaggtttaagggattaggtttctgttttatccaaatggaaataaatgaattaaaaaaacataaagatggtgacgtgtca  880500                                                                                      --------->MYB52(1)                                                                                     ------->GAMYB              <---------AHL20(2)                                                    <---------MYB111(2)             <---------AHL20(1)                                                     <------------MYB.PH3(2)        ------------>CBF                           <---------WOX13(1)        <---------DEAR3(2)   --------->AHL20(2)                             <------------CBF          <---------DREB2C(2)   <---------AHL20(2)                           <---------AHL20(2)<---------AHL20(2)<---------MYB46(2) ------At4g35610    --------->At4g35610         --------->AHL20(2)<---------ICU4    <---------MYB52(2) ------->GT1 --------->AHL20(2)               <----------DOF2 <---------AHL20(2)    <---------MYB111(1) ----HVH21   <---------AHL20(2)            <---------YAB1     --------->AHL20(2)    --------->MYB46(3) -->HVH21 --------->WOX13(1)         --------->AHL20(2) ----------->GT1    --------->DDF1          -- ------------TaNAC69(2)              <---------AHL20(2)<---------TOE1(3)  <-----------HVH21   ------- ----->At4g35610    <---------At4g35610 <---------YAB1 <---------TOE2(3) <-----------RAV1(1)  <------   gctaaaaaaattcaattaattttgctgagataattttgttttattattctttaattgaaggtaaataaatatttcatgtcggtccaactaactaatataa  880600                                                   <------MYB46(1)                                                   <------MYB83                                                  <---------TOE1(2)                                               <---------ANAC58          --------->DAG2                            <---------AHL20(2) <---------ANAC58   --------->LBD16                --------->AHL20(1)          <-----------RAV1(1)  ----------->GT1        <----------ID1     --------->AHL20(2)  <---------ANAC46  <---------ANAC46 --------->GT1  --------->AHL20(2)    <----------DOF2   --------->AHL20(1)          <-----------RAV1(1) -->AHL20(2)    <---------AHL20(2)    ------>ZmHOX2a(1) <---------ARR11(3)----------->GT1        <--- ---AHL20(2)   --------->AHL20(2)  ---------->ID1 <---------TOE2(2)    ---------->DOF2           ----   attgaaaaaaaaaacaaaaaaattagctataaatttagtcctttttttgtcgtaggtatatattagtccgtataaaaggtaaaattatgttgtttcaaat  880700                                            --------->MYB55(2)                                            --------->MYB111(2)                                            <---------MYB46(3)                                          <---------ANAC58                                          <---------ANAC58                                         <---------MYB46(3)                                     --------->ATHB51                                     --------->ATHB12                                     <--------ATHB1                                     -------->ATHB1              --------->LBD16                                    <---------ATHB51            <---------ANAC46                                    --------->ICU4              <---------ANAC58                                    <---------YAB1    --------->AHL20(2)                                  <---------------AGL15         <---------ANAC58    <---------TOE2(3)                                  --------------->AGL15       <---------At5g28300   <---------TOE1(3)                                 <---------YAB1       <---------AHL20(2)           <---------DOF5.7(2) ------AHL20(2)                --------->YAB1<-------GAMYB   <-----------GT1    --------->TOE1(3) ----->AHL20(2)     <---------TOE2(3)<---------ICU4  <---------AHL20(2)         --------->TOE2(3)   taaaaactgtttttcaaaaattaagttatagaattacaattattggttgttgttatttattttttaccgtggtaagaaggaaccttaacgttgtttcttc  880800                                                                                   --------->TGA1a                                                                                   --------->ANAC46                                                                                   ==================                                                                                   --------->bZIP60(2)                                                                    <---------AHL20(2)                                                                 ----------->GT1   <---------O2                                                           ==================================bZIP_DOF                                                           ---------->DOF2         --------->ANAC58                                                         <---------YAB1            <---------TGA1a                    --------->ANAC58           --------------->AtSPL3      <-----------GT1                    --------->ANAC58         <---------AHL20(2)--------->ARR11(3)  --------->O2               <---------ETT(2)             <---------AHL20(2) <---------ARR11(3)  --------->ANAC58               --------->ETT(2)             --------->AHL20(2)--------->YAB1     <---------ALFIN1   <              <------NtERF2    --------->ANAC58<---------------AtSPL8     <-----------GT1          <-            <---------DEAR3(1) --------->ANAC58--------------->AtSPL8    <---------AHL20(2)        <-   tactactaccatcgtcgtcgacaagacaaggctaagctatcgaaaattaaatgtacaatatcaaagatagtttattttaacacacacgtcgctctcacct  880900                                                                                                   --                           ------>ZmHOX2a(2)                                                ---------                         <---------ARR11(3)                                       <---------ATHB51 <-          --------->HSFB2a(2)                         <<<<<<<<<TBF1               <---------AHL20(2)          <---------HSFB2a(2)                  <---------AHL20(2)             ----------->TBP  ------ ==========bZIP_DOF      <---------AGP1 --------->ARR11(3)                    --------->AHL20(2)  --- ----------DOF2          --------->ARR11(3)   --------->AHL20(2)   ------>ZmHOX2a(2)        --------- --------ANAC58         <---------CCA1(2)  <----------DOF2       --------->ARR11(3)--------->MYB52(1) --------ANAC58     <------------CBF    <---------ARR11(3) <----------DOF2    <---------YAB1---------   tgctttaatcttcgagacgaagtattggatctcaaaaacaactatcttttaaattcttcttctttgtgatctcgactcttataaataatggaacacgaca  881000  Previous    Next  AGI:  At3g03630.1    Description:  CS26 (cysteine synthase 26); cysteine synthase. Identical to Probable cysteine synthase, chloroplast precursor [Arabidopsis Thaliana] (GB:O22682); similar to OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C), cysteine synthase [Arabidopsis thaliana] (TAIR:AT3G59760.1); similar to OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C), cysteine synthase [Arabidopsis thaliana] (TAIR:AT3G59760.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO45407.1); contains InterPro domain Cysteine synthase K/M; (InterPro:IPR005856); contains InterPro domain Pyridoxal phosphate-dependent enzyme, beta subunit; (InterPro:IPR001926); contains InterPro domain C Range:  from: 877935    to: 880453    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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