Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->MYB52(1)                                                                 --------->AHL20(2)      <---------ATHB51                                  <---------TOE2(3)              --------->AHL20(1)  ------->GAMYB                                ---------->DOF2                  <---------AHL20(2) --------->ANAC46                          ----------->GT1             <----------DOF2         --------->WOX13(1) <---------ICU4         ---------->DOF2       <----------DOF2   --------->AHL20(2)--------->MYB52(1) ------YAB1         ---------->DOF2----------->GT1    --------->TOE2(3)   ----------->GT1--------->ICU4   tgataatttcactaacaaaaaaaaaagaaagaaataaaggtttataagctttcgaactttaaaaaaaaaaattgtttagttaatcaacgaaataatggaa  876400                       --------->WOX13(1)                                               --------->ANAC58                    --------->TOE2(3)                                                   --------->ANAC58                  --------->ICU4                                                        --------->ANAC46             <------NtERF2--------->YAB1                                 --------->ATHB12  ----------            ----------->GT1                                             <-------TEIL    -------------           <---------ANAC46                                             <---------YAB1 --------->DAG2          <---------LBD16<---------------AGL15                 XXXXXXXXXXXXXXXXXXXX>MIR843<----------ID1   --------->AHL20(2)  <-----------GT1    --------->AHL20(2) <-----------GT1          ---------->DOF2   <---------AHL20(2)  --------->YAB1  --------->YAB1    <---------AHL20(2)  ----------->GT1  XXXXXXX   tgtgttttattaggcggataaatattaatcatattagtaattcataaaatcacacacatatatttacaacgagtttcattggaaaaaaaaaagcaacaaa  876500               <---------ARR11(3)               --------->GLK1(2)                                                   <-----------GT1               --------->ARR11(3)                                               <---------AHL20(2)              --------->RVE1(1)                                                 --------->AHL20(2) ->RAV1(1)  --------->AHL20(2)          <---------ARR14(2)                     --------->AHL20(2) ----------->ANAC81 <---------MYB52(1)  --------->ARR14(2)                  ------>ZmHOX2a(1)     <-- XXXXXXXXXXXXX>MIR415      <---------TOE2(3)                           <-----------GT1  <----------DOF2   acaaaaacaaaaaaaaaaatctgttttttaagttttcacgagtatatgcaattccaaacagtttttttttttttaatcctatttatttctcttttttttt  876600                                                                   ---------->DOF2               ----                                    <------ZmHOX2a(1)        <---------At4g35610             --------                   --------->HSFB2a(2)   ----------->GT1     --------->At4g35610             --------                   <---------HSFB2a(2) ---------->DOF2  --------->CCA1(2)               <---------ANAC58            <----------DOF2<-----------HVH21         --------->ANAC58                   <---------ANAC58 ---------GT1   <---------YAB1   <-----------RAV1(2) --------->ANAC58                <---------CCA1(2)   tttcttcccaatccctttcttatagaaattgtcagccaggagaaagttatatatcaagaaatgagctaataaagtttgtttaaactcatttcttacctca  876700                                                           <-------TEIL                                                           --------->ZAT14                              <----------DOF2              <---------ZAT14                              <---------DAG2         --------->ANAC46       --------->TOE2(3)   <-------TEIL             ------->TEIL          --------->TOE1(2)         --------->TOE1(3) ------>DOF2           --------->At4g35610        --------->TOE2(2)      <-----------GT1 ->TOE1(3)             <---------At4g35610      ------->TEIL          --------->MYB52(2) ->TOE2(3)  --------->YAB1<-------TEIL          --------->ARR14(2)--------->ATHB12                ---   aaagattcatcaaaacataacacacagatgcacttttgttatatatactgaatctacgaagtacagagtgattagttaccttagttcaaggggaaagact  876800                                                                         <---------AHL20(1)                                              --------->MYB52(1)         <---------AHL20(2)                                        ------------------------>ANAC81  --------->AHL20(1)                                  <------NtERF2                          --------->AHL20(2)                                 <------MYB83 ----------->RAV1(1)   --------->AHL20(1)                                 <------MYB46(1)             ----------->GT1  ----------->GT1                                <---------DEAR3(1)      --------->YAB1  --------->AHL20(2)       *TSS                    --------->ALFIN1       --------->AHL20(2)<---------AHL20(2)    <------  <----------ID1               <--------P    --------->MYB46(3)     --------->AHL20(2)        ------- ------->DOF2                <---------MYB46(3)  ------->GAMYB      <---------AHL20(2)      <--------   caaagcgaagaagaccagagaagagagacagaggttggcgaaaacgaacaacagaaaataatagagaaaataaaataaatttgtaaaactgaagttacct  876900     --------------->AGL15                        --------->GLK1(2)     --------->CCA1(2)     ------>ZmHOX2a(1)                   <-------MYC3                  --------->ARR14(2)         <--     <---------------AGL15 ----------->GT1--------->ALFIN1             <---------ARR14(2)         --- ---ANAC46  <---------TOE2(3)            ------->MYC3          <---------AHL20(2)           <-------- ---->RAV1(2) <------ZmHOX2a(1)         --------->ANAC55(2)    <---------YAB1          --------->MYB52(1) ---GT1<----------DOF2<-----------HVH21 <---------ANAC55(1)   --------->AHL20(2) ----------->GT1<----   ggttttcctctttttaggaaaaaatgtcagagtaaaaccgaaacgtgttgataatctatagacatataatagagatttgcaaggggtataaacggattat  877000                --------->TOE2(2)              -------->P    <---------HSFB2a(2)    --------->HSFB2a(2) -------------AtSPL8                                                                               -- ------------>AtSPL8                   --------->ARR14(2)                                   <--------HAHB4 -GLK1(2)    --------->MYB52(1)        <---------ARR14(2)                                  <---------YAB1 -----YAB1 <---------MYB52(2)     <---------ANAC46           ---------->DOF2       <---------ZAT14---   gatgtactagaaaactaacctatgtgtgtgtgtaatgtgtgtattcgtacatatgtaaacttacaaagaaaattttgaattgtagttctctgtattatta  877100                                                                                                  <--                                                                                                  <--                        --------->AHL20(2)                                                        <--                   <------NtERF2                                                                  ---                  --------->LBD16                                                                ----                  ----------->GT1                                      <-------TEIL              <---                 --------->LBD16                                  --------->AHL20(2)             <---                 <---------ANAC46                                 --------->AHL20(1)             ----            ---------->DOF2                                       <---------AHL20(2)           <-----           <---------AHL20(2)                                     <---------AHL20(1)    --------->CCA1(2)          --------->AHL20(2)  --------->ANAC46             ----------->GT1             <---------ARR14(2) ------->CCA1(2) --------->RAP2.6(2)    <-----------GT1  <---------ANAC58              --------->ARR11(1) ------>ARR11(3)<---------LBD16      <---------ICU4      <---------ANAC58              --------->ARR11(3)   gatatatccaaaattaatgccggaaaaaatatacaaaacttattacaacacaattgttttcttgttaataaaatacattatgcgatatagatatggacca  877200                                                                                                   -- --------->TOE2(3)                                                                                --- <----------DOF2                                                                                  <-- -------ARR14(2)                                                                                 ---- -------ARR11(3)                                                                                 <--- -------ARR11(1)                                                                                <---- ------>ARR14(2)                                     -------->P                                ------ -->MYB83<-----------GT1                         <-----------GT1                         --------->YAB1 ------CCA1(2)                                  --------->YAB1       <---------AHL20(2)  <---------ICU4 ------ARR14(1)                                <---------YAB1        --------->AHL20(2) --------->ICU4 -->MYB46(1)          <-------TEIL         <---------GLK1(2)        --------->AHL20(2)  <---------ATHB12 ----MYB59  ------->GAMYB            <---------GLK1(1)    <---------MYB52(1)            <---------YAB1   aatctttaatctaaccctccaaaattcatactactgaagaaatcagattattatcaacccgttttgaaaatttaaaaactggagtttctaatcattcccc  877300  Previous    Next  AGI:  At3g03620.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT5G17700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45424.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 873756    to: 876807    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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