Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->LBD16                                                 ------>ZmHOX2a(2)                  ------>ZmHOX2a(2)             --------->ARR14(1)                 <------ZmHOX2a(2)              --------->CCA1(2)                <---------AGP1                  <------ZmHOX2a(2)                --------->ARR14(2)             --------->ARR11(3)          <---------ARR14(2)                   <---------ARR14(2)          --------->ARR14(2)          <---------ANAC46                <---------ZAT2       ------>ZmHOX2a(2)              <---------ANAC58      --------->LBD16      <------ZmHOX2a(2)  --------->ANAC58      --------->ARR14(2)     <---------At4g35610     --------->ARR11(3)  --------->ANAC46      --------->AGP1   <---------MYB46(3)     <---------ARR11(3)  --------->ANAC58    ----------->ARR10 <--------P -->GLK1(1)     <-----------ARR10     <---------ANAC58    <---------LBD16   ---------->DOF2 ->ARR14(2)     <---------ARR14(2)  <-----------HVH21 ---------->DOF2 --------->At4g35610 --ARR14(2)    <---------CCA1(2)<---------LBD16<---------ARR11(3)     --------->ZAT2    <---------ETT(2)   gctctgagatcgtattcggatctatccacacaacttcgggtcgtgtcaagatccgaagaagccgggttgttcagctcagaaagcatgctctcgacccagt  821000                                                          --------->TOE2(3)                                                         <--------HAHB4                                                         --------->ATHB12                  --------->YAB1                         <---------ICU4                 <---------YAB1                         --------->ICU4                 --------->ICU4                         <---------YAB1            ----------->GT1                           --------->YAB1        --------->At4g35610                       ------>MYB83      <-----------RAV1(2)                         ------>MYB46(1)     <------ZmHOX2a(2)                           ----------->RAV1(1)   <---------GLK1(1)                           --------->MYB46(3)   <---------ARR11(3)   tagagagatcagatgggttataatgaacagagtcgtttaagacagtagaaccaacatcatcattagacaagaccatctcaagttgttcaagcttctgtgc  821100                           --------->REM1(2)                                      --------->At4g35610                       --------->HSFB2a(1)                                      --------->YAB1      -                      ------->TEIL                                              <---------ICU4      -                  <------ZmHOX2a(2)                                          --------->YAB1        --                 <-----------ARR10                                  <---------MYB46(3)             --                 <---------ARR11(3)                               <-------GAMYB--------->ICU4      --                 --------->ARR11(3)                              <-----------RAV1(1)              <--             <---------At4g35610                           <-----------RAV1(1) <---------YAB1   -----   tacttcagccatctcagaagatcgaaccttgtagccaagaacagcaagaagctcatcatccatgttgctgttgttgttgtcatcatcagccttcttctta  821200                                                          <---------TOE1(2)                                                          <---------TOE2(2)                                                       ==========================HOX2a_HOX2a                                                      ===========================HOX2a_HOX2a                                                      <------ZmHOX2a(2)                                                     <---------ARR14(2)            <---------HSFC1(2)                       --------->ARR14(2)            --------->HSFC1(2)                      <------NtERF2            --------->HSFB2a(1)                    <---------MYB46(3)            <---------HSFB2a(1)                   <---------ANAC46    <---------ARR11(1)           --------->ARR11(3)                     <---------ANAC58    <-----------ARR10           <---------ARR11(3)                     <---------ANAC58    --------->ARR14(2)          <------ZmHOX2a(1)   --------->ZAT2     --------->ATERF1(1)  <---------ARR14(2) -------->LBD16               <---------ZAT2     <------NtERF2       <---------ARR14(1) ----->NtERF2                --------->GLK1(2)   <---------LBD16     <---------CCA1(2) ------->ANAC58     --------->LBD16            <---------DEAR3(1)   --------->LBD16 ------->ANAC46    <---------HSFB2a(2)      <-----------RAV1(1)   <---------LBD16      <---------ANAC58 ------->ANAC58    --------->HSFB2a(2)      <---------AtMYB61   <-----------GT1        <---------ANAC58 -------LBD16      --------->ANAC46   <---------AtMYB61------>ZmHOX2a(2)            <----------DOF2 < ---->ARR14(2)    <---------LBD16 <---------MYB52(1)--------->ATERF1(1)   ------>ZmHOX2a(1)      <---   tccgccattgaaggaccttctccggaacgagaagctggtagtggttttggtggcggatcccatgtttctccgtatcctctcttcatctttcttgttcttg  821300                                                                                         ----------->GT1                                                                                        <---------TOE2(3)                                                                                        <---------TOE1(3)                                                                                    <------MYB83 <---                                                                                   <---------AtMYB61                                                                                   --------->MYB111(2)                                                                                   --------->MYB111(1)                                                                                   <---------MYB46(3)                                                                     <---------DAG2--------->MYB46(2)                                               ----------->GT1       <----------DOF2<------MYB46(1)                                    <----------ID1                <-----------GT1  --------->MYB59<-- ---------AtMYB61                ---------->DOF2                 <---------ZAT14  <--------P  <------ ------YAB1              ----------->GT1 ---------->DOF2 ---------->DOF2          <---------MYB55(1)   tgatggtgagttaagagactgatgaagttgaaaaaaaaagaacaaaagagagtttataagaaaggagtttactttacttcatgggttggtaaggttttta  821400                                                                                                 ----                                                                                         <---------YAB1                                                                                      --------->GLK1(2)              ----------->GT1                                                        <---------ARR14(2)              <----------ID1                   <---------YAB1                        <---------GLK1(2) ------YAB1  *TSS               <---------ANAC46     <------MYB83                  ----------->ARR10 -------AHL20(2)       ---------->DOF2  <----------DOF2      ------------>CBF ---------->DOF2  <----- ---YAB1    ---------->DOF2     <-----------RAV1(1)  <------MYB46(1)  <---------LBD16--------->ARR14(2)   ttaatgggatttgaaaaagaaaaaaaaaagaattttgtgggtctttgttgtgatttggttacagacaatttttgtggaaagaaaggagattctgagagga  821500      ---------->DOF2   ----------->TBP                                                                 --------->ANAC46  <---------AHL20(1)                                <---------ZAT14                --------->ANAC58  --------->AHL20(1)                                --------->ZAT14                --------->ANAC58  <---------ARR11(3)                         ----------->HVH21              --------->YAB1 <-----------TBP                 --------------->AGL15               --------->CCA1(2) -------->CBF<-------PIF5       ----------------->AGL2             --------->CCA1(2) -ZmHOX2a(1) ------->PIF5       ----------------->AGL3<---------ANAC46    --------->GLK1(2)  --------   gcaatatataaagcacgagggagtgagagagaggtccaattagagaagtgactgtgaagtgtgtttaagagataagaatcagagcatgccactattgttt  821600                                  --------->ANAC46                                  --------->ANAC58                          ------>ZmHOX2a(1)    <---------DAG2    <------------------------ANAC81 <---------ARR11(3)                          <-----------GT1 --------->At4g35610     <---------MYB59       <----------DOF2          <-----------GT1 <---------At4g35610  <-----------GT1    <-----------GT1        ----------->GT1<---------YAB1 ->ATHB12    <----------DOF2      --------->ANAC58          --------->ICU4 <----------DOF2      -----   ggcatctgtttctctctttcattttttcctaactccaagaaatttactcctttttttttgtagtaatggataattttctttataactgtttagtagagat  821700                                                          <----------DOF2                                                         <---------ANAC58                                                      <---------ZAT18                                            --------->MYB59                                        <----------DOF2  <---------ANAC58       <---------ARR11(3)                                     <-----------GT1  --------->ZAT18     <------MYB46(1)                                <---------DAG2       <---------ANAC58     <------MYB83           ----                                <----------DOF2      <---------ANAC58 <---------MYB46(3)       <-----                        --------->MYB52(1)  <---------TOE2(3)         <-----------RAV1(1)      ------ ---->GLK1(1)        >>>>>>>>>>>>>>>>>LFY   <---------TOE1(3)     --------->ICU4--------->ARR11(3) --   ttctaaatctgtttagtagttttgaccaatggaactttataacttttaggttgtagtgtgctttcgtcatatttgttggtaagatgtttttaagttgtga  821800                        <---------ZAT6    ---------->DOF2-------->HAHB4  <---------YAB1   --------->YAB1 ------->GT1      <---------YAB1 ----ZAT14       <---------TOE2(3)          <------ZmHOX2a(2)                        --------->ARR14(2) --->ZAT14  <----------DOF2       <---------YAB1                                     <---------ARR14(2) ------->ICU4   --------->YAB1  <---------ZAT6                                       <---------GLK1(2)   agtgattaaagtgtcttttaatgatagtgtcatagtcttatagacgatcacgacttaattgttcttaaatgccattgaatattgtcatattctcgcttac  821900  Previous    Next  AGI:  At3g03450.1    Description:  RGL2 (RGA-LIKE 2); transcription factor. Identical to DELLA protein RGL2 (RGL2) [Arabidopsis Thaliana] (GB:Q8GXW1;GB:Q9SRP9); similar to RGL3 (RGA-LIKE 3), transcription factor [Arabidopsis thaliana] (TAIR:AT5G17490.1); similar to GIA/RGA-like gibberellin response modulator [Gossypium hirsutum] (GB:AAY28970.1); similar to DELLA protein [Malus x domestica] (GB:AAY56750.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59753.1); contains InterPro domain GRAS transcription factor (InterPro:IPR005202) Range:  from: 819344    to: 821413    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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