Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ------>ZmHOX2a(2)                                                 <---------AHL20(2)                                                 --------->ATHB12                                  <-                                --------->YAB1  <---------AHL20(1)                                 --                             <---------CCA1(2)  --------->AHL20(1)                           <-------        <----------DOF2    --------->YAB1       --------->AHL20(2)                     <-----------GT1 ------>DOF2       ----------->GT1<---------YAB1<---------AHL20(2)               <---------YAB1 -----   aaagttgatactttagggacagagtaaaatcatatcatatttgaagaaaatttattgatcgacttatgcattactatattgttatgaataaacttctttt  814100                                                                                   --------->AHL20(1)                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                              --------->AHL20(1)                                                                              <---------AHL20(1)      ----------->GT1                                                         <---------AHL20(2)     --------->DAG2                                                        --------->YAB1    ---------->DOF2                                                     --------->YAB1 --------At4g35610                --------->YAB1                      <---------YAB1 ------->At4g35610               <---------YAB1                    --------->ARR14(2)             --- ---DOF2                       <---------ICU4     --------->GLK1(2)<---------MYB52(1)  --------->CCA1(2) ----->DOF2         <-----------GT1    <---------ATHB12      <---------GLK1(1)--------->AHL20(2)  <--   aagcagaaaagttaacaatgttttaccaattgattatcacaatcagttttagaatccaagttgatttcagttatgcataataaaataaaatatgggtttg  814200                                                                                              -------                                                                                           ------->GAMYB                                                                                           --------->AtMYB61                                                                                          --------->MYB46(3)               ----------->GT1                                                            <---------MYB55(2)              --------->DAG2                                                             -------->P            ---------->DOF2           ----------->GT1                                   ------->GAMYB       --------->ATHB12            <---------CCA1(2)                                   --------->MYB46(3)      <---------YAB1      --------->TOE2(3)                   --------->ZAT6           <---------MYB55(2) ------>At4g35610    --------->AHL20(2)            <<<<<<<<<<WRKY26                    <---------MYB111(2) -------At4g35610    <---------AHL20(2)--------->TOE2(3)   <----------DOF2     <---------REM1(1)   agctgaaaatgatagaaaggtaaaaaaatgttaacttatatcgtcaaatattgatcaacttctttcactattttgttcttgttgtaacaacaaccaccaa  814300                                           --------------->AGL15                                           <---------------AGL15                                           <---------YAB1                                          <-----------------AGL1                                          <-----------------AG                                          ----------------->AGL2                    ---------->DOF2                                 --------->ANAC58                                  <---------AHL20(2)                         ---------->DOF2  ----------------->AGL3      <---------AHL20(2)                      <---------TOE2(3)   <-----------------AGL3      ---------->DOF2                  --------->At5g28300     <-----------------AGL2     --------->AHL20(2)       ------- -->AtMYB61       <-------GAMYB  --------->ANAC58--------->MYB59 <---------YAB1   <---------AHL20(2)   aaaaacaagtttgtattgacagttaatgaaagaccaagtcaaattctaattttggtaattcggttttctcattaaatcgcctaatttaaagcatagcctc  814400                                                    ------>NtERF2                                                    ----------->RAV1(1)                                        ----------->RAV1(2)                                    ------                                        <---------At4g35610                                 ---------                                        --------->At4g35610                                 ---------                                    <---------ARR11(3)      <----------ID1                  ---------                                   --------->YAB1  <---------ETT(1)                         ---------                            --------->ZAT6   --------->GLK1(1)                  --------->ANAC46  ---                     --------->AHL20(2) ========================RAV             *TSS      <---------TGA2(2)                     ----------->TBP--------->ARR11(3)   ---------->DOF2 <---------------AtSPL8------                   <----------DOF2<---------YAB1   --------->ANAC46     ---------->DOF2  ----------->TGA1 -->TOE2(3)  <---------CCA1(2)  --------->YAB1------>ZmHOX2a(2)     <----------ID1       ----------->HVH21   aacttcttcacattcaaatctctttatataacacttatgatcatctgatctctccgacaaaaagaacaaaactacaaagtacaaacaatggctgacgcaa  814500     --------->At4g35610                                              <---------ZAT2   --------->DAG2                                                     --------->ZAT2  ---------->DOF2            <---------ARR11(3)                     <------NtERF2 ----->RAV1(1)             --------->ANAC46                   <---------At4g35610 >ANAC58                   --------->ANAC58                   --------->At4g35610 >ANAC46            <---------ARR14(2)                      ---------->CDC5                <---------HSFB2a(1) >bZIP60(1)         --------->ARR14(2)                  <-----------ARR10                 ------->TEIL >ANAC58      <---------WRKY18(1)                       --------->ARR11(3)   <---------GLK1(1) ---->GAMYB<---------AtLEC2--------->ANAC58             <---------ARR11(3)   <---------At4g35610 --->MYB52(1)----------->HVH21                    ----------->GT1------>NtERF2           <---------ARR11(3)   cagaaaaagctgagcatgaccgtattttcaagaaatttgatgctaatggagatggaaaaatctcagcggccgagcttggagatgctctcaagaaccttgg  814600                                                                    --------->SPL7          <-------PIF5             <------ZmHOX2a(1)                                    <---------SPL7<---------WOX13(1)       --------->ANAC46               <---------WOX13(1)         --------->TOE1(1)          ------->PIF5     <---------ALFIN1             <------NtERF2                  --------->TOE2(1)--------->ATHB12  - <-----------HVH21        <---------YAB1                   <-------TEIL       --------->ATHB12     <-   ctcggtcacacacgaggacattaagcgtatgatggcagagattgataccgatggcgatggatacatctcgtaccaagaattcattgatttcgcaagtgcc  814700                                    ----------->GT1 ------>ZmHOX2a(2)                                  ---------->DOF2  <------ZmHOX2a(2)                           --------->ARR11(3)     --------->ARR11(3)                           <---------ARR11(3)     <---------ARR14(2)                           --------->ARR14(2)     <-----------ARR10            ---------->DOF2<---------GLK1(2)      <---------ARR11(3)          <---------YAB1   --------->ARR14(3)     --------->ARR14(2)  ---------->DOF2 -------->YAB1             <---------ARR14(3)     --------->AGP1<---------AHL20(2) --------ATHB12          ----------->ARR10        <---------AGP1--------->AHL20(2)   <---------AHL20(2)   aatcgtggtcttatgaaagacgttgccaagattttctaaagtaaaatgaacagatctaatctatatttatatgaaagggtttgagaattaatcgtgttca  814800                                                                                   <---------YAB1                                                                                  --------->KAN4(2)                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                        <---------ARR14(2)                                                                        <---------ARR14(3)                                                                        --------->ARR14(3)                 --------->ATHB12                                       --------->ARR11(3)                 --------->YAB1                                         <---------ARR11(3)                 <--------HAHB4                                         --------->ARR14(2)                 <---------ICU4                                         <---------AGP1                <---------ATHB12                   <----------DOF2    ----------->ARR10        <-----              --------->WOX13(1)           <----------DOF2   --------->ANAC55(2) <---------KAN4(1)           --------->YAB1               <-----------GT1     --------------->AGL15--------->KAN4(1)  <   atttgttttgtaatgacaatcatttgatgaagtatgtttttttttctttatgtctttattttcatgtaatggaagatcttggattattcttgaagtggat  814900                                                                  <---------At4g35610                                                             <---------ARR14(2)                                                             --------->ARR14(2)                                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  <--------                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   ---------                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 <---------ANAC58                                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <---------ANAC58                                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             <----------DOF2                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------YAB1                                 <---------DAG2           <---------RAP2.6(2) <---------AHL20(2)                           <----------DOF2               <---------LBD16     <---------AHL20(2) ----ANAC46        <-----------GT1  <------------------------ANAC81          --------->AHL20(2)  ---- -----------GT1 <---------GLK1(1)<----------DOF2        <-----------GT1 ------>ZmHOX2a(2)<---------ANAC46   tgtaacgatgtattgaagaattctccattctttagcttttttttttttttttttttttttgcggttttggctgatctaattttatgctttagcgtggtta  815000  Previous    Next  AGI:  At3g03420.1    Description:  Ku70-binding family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO14648.1) Range:  from: 812455    to: 814034    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g03430.1    Description:  polcalcin, putative / calcium-binding pollen allergen, putative. Identical to Probable calcium-binding protein At3g03430 [Arabidopsis Thaliana] (GB:Q9SRP7); similar to polcalcin, putative / calcium-binding pollen allergen, putative [Arabidopsis thaliana] (TAIR:AT5G17480.1); similar to Polcalcin Bra n 2 (Calcium-binding pollen allergen Bra n 2) (GB:P69198); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 814480    to: 814739    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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