Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                         <---------ZAT2                        --------------->AtSPL3                                           --------->At4g35610                       <---------ZAT14                                                   <---------At4g35610                ------->TEIL                           <---------AHL20(2)                --------->ZAT2      <---------ANAC58 --------->ZAT18       <----------DOF2                            ------->TEIL      <---------ANAC58 --------->ZAT14      <---------ANAC58                          <-------TEIL --->ANAC46    <---------CCA1(2)            <---------ANAC58     <---------ZAT18   <---------At4g35610 --GT1<---------ANAC46 <---------ZAT18  <---------MYB52(1)    <----------DOF2      --------->At4g35610   ccagtactgcttgtgatgtatctagtgcagtacatgccttcccttggcttttgctatttagtttctttgcgctcaagaggttttcagatgcagctacgag  794800                                                                                                   <-                                                           ------>ZmHOX2a(1)                     <---                                                           <---------HSFB2a(2)                   ----                                                           --------->HSFB2a(2)                <------                                                           --------->HSFC1(1)                 <------                             ------->GAMYB                 <---------HSFC1(1)                 <------           --------------->AGL15              --------->ZAT14                                 <------           <---------------AGL15              <---------ZAT14    ----------->GT1         ----------->HVH21          <-----------------AGL2         --------->ZAT18  --------------->AGL15        <---------ANAC55(2)          <-----------------AGL3 <----------DOF2      <---------GLK1(1)     ---------->DOF2 <--------          ================================================================MADS_MADS    --------->ANAC55(2) ---------------TaNAC69(2)----------->RAV1(1) <---------ZAT18  ---------->DOF2  ---------->DOF2 <----   ataaatcggactactgtatatagtaatccaacaggcttttgagcccagtggacttgagttcctagaaaagaaaaaccgaaaagaaagttatgtgatgcgt  794900                                           --------->ARR14(2) -----------CBF                            <---------ARR14(2) ------ARR14(2)                            <---------GLK1(2)              ----------->HVH21 ----->ARR14(2)                         --------->HSFB2a(2)           <---------At4g35610 ---ANAC58                              <---------HSFB2a(2)           --------->At4g35610 ---ANAC46             <---------LBD16------>NtERF2                   --------->ZAT2 ---ANAC55(2)      <----------DOF2 --------->At4g35610             ---------->DOF2 ---ANAC58  --------->YAB1 <---------ARR14(2)                  ------>ZmHOX2a(1)    <---------At4g35610 -ANAC46  <---------TOE2(3)--------->ARR14(2)                ----------->RAV1(2)    --------->At4g35610 -----CCA1(2) ---------->DOF2 <-----------GT1            <---------ALFIN1<-----------HVH21         <-   atattgaagactaatgaaaagcttttggggattcacttgctgccagaaactcacagacaacactcctgccaaagctgtcacaaggctgatcactgttcat  795000                        <------NtERF2                       ------>NtERF2                       --------->LBD16                       <---------RAP2.6(3)                      <---------RAP2.6(2)                      <---------ATERF1(2)                      --------->ATERF1(2)                     <---------LBD16                     --------->RAP2.6(3)               --------->CCA1(2) --------->AHL20(2)              <---------ARR11(3) <---------AHL20(2)                                                 -              <---------ARR14(2)<---------AHL20(2)                                                 <-          --------->ZAT14  --------->At5g28300           ------>ZmHOX2a(1)                        <--          <---------At4g35610   <---------AHL20(1)<------------------------ANAC81                ----          <---------ZAT14 ----------->GT1     <------------MYB.PH3(1)   <---------ICU4        <------ ---------DOF2--------->ARR14(2)--------->AHL20(2)<----------DOF2 <----------DOF2     <-----------GT1   tctttccttctctgcagatatgtgccggcagtaatttaatttttggtaactgctttctccttcttctcctttactcatttcccctatatttccttccttt  795100      --------->AHL20(2)     <---------YAB1   <--------HAHB4   <---------ICU4                   <------------CBF      --------->YAB1   --------->YAB1            --------->ICU4              <---------YAB1       ---------->DOF2  <---------YAB1             <---------YAB1           --------->AHL20(2)   ------>ZmHOX2a(2)  --------->ICU4          <---------YAB1  <---------ARR11(3)              <------ZmHOX2a(2) -------->YAB1           --------->ARR11(3)           --------->AHL20(1) <---------ARR11(3) --------YAB1            <---------ARR11(3) ------>ZmHOX2a(2)            --------->ARR11(3) ---------GT1          --------->ICU4     --------->ARR11(3)      ------------>CBF                 -- ----->YAB1       ----------->GT1  <<<<<<<<<RAP2.2    <---------AHL20(1) <---------AGP1           --- ----DOF2      <------------CBF   <---------TOE2(3)   <---------AHL20(2) --------->AGP1         -----   tatcatcattatatacaaattggtaaatatcatttttagattgtgatcttcgaaaatttattatagatgtcaatagatctaaaagtttatacaagaagaa  795200                                                                <---------ANAC46                                                            <---------HSFB2a(1)                ------                                                            --------->HSFB2a(1)                <-----      <---------LBD16                                       <---------HSFC1(2)           ----------->GT1 --------->GT1                                       --------->ARR14(2)                 <---------TOE1(3) ------>DAG2                   ---------->DOF2       <---------ARR14(2)                 <---------TOE2(3) ----->DOF2      ---------->DOF2       <------ZmHOX2a(1)    --------->HSFC1(2)      ------>ZmHOX2a(1)   aaggtgaactcggaaaccgaaaagatggagaaggaaagtcaggaaaactcgaccagacccgatgcttcgtctactgttttctcttcctctaaggtaatat  795300                                                                              --------->ANAC58     --                                     <---------MYB46(3)                       --------->ANAC58     --                       ------>ZmHOX2a(1)                                  --------->ANAC58        ---                       <----------DOF2          <---------RVE1(1)         --------->ANAC46   -------- --->ARR11(3)       <---------ATHB12--------->ALFIN1<---------AHL20(2)    --------->ANAC58--------->TOE2(3) ----ARR11(3)--------->GLK1(1)    <-----------RAV1(1) <-----------GT1<-------TEIL    --------->STY1(2)   ctctctataatccaaatatccaatcctttttctcttatgtgggtgatgcgatatttatacaaattgcagagtacatgcgcaagccctagctatctcaaag  795400                                                                    <---------WOX13(1)                              --------->ARR11(3)                   <---------GLK1(2)                             --------->YAB1                        <---------ARR14(2)                            <---------YAB1                         --------->ARR14(2)                       <---------ANAC58                       ------>MYB46(1)                       <---------ANAC58                       -------->P               <---------MYB52(1)                       <---------ANAC46                       ------>MYB83           <---------ANAC58 ------->At4g35610 <---------ANAC58                   --------->ARR14(2)             <---------ANAC58 ------->ZAT2      <---------ANAC58                  <---------CCA1(2)      --------->YAB1 <--------- ------>GLK1(2)   <------MYB46(1)                    ------>ZmHOX2a(1)     <------ZmHOX2a(2)    ----- -->DOF2          <------MYB83<---------ARR11(3)     =============================HOX2a_HOX2a <------   aagctggagacttgatcagtaggttgcctgatgatattctccaactaattctctcctatcttccaaccagattggcgatcaaaacttccgttttatccag  795500                                                        --------->ARR14(2)  --------->ARR14(2)                                                        <---------ARR14(2)  --------->GLK1(2)       <---------ANAC46                            --------->MYB52(1)       <---------ARR14(2) --GT1<------NtERF2                             --------->DEAR3(2)    <-----------GT1------>ZmHOX2a(2) ---->ANAC46                --------->PCF5   <----------ID1   <---------ANAC46  ------>ZmHOX2a(1) -----RAV1(2)         <-------TEIL   ------>ZmHOX2a(1)  <---------GLK1(2)  <---------GLK1(2)   gcgatggaggcatgtatggtctgatacatggtccctctccttccatagggacagaccggatgctccttgtattaacagaatcctagatcgctacagggct  795600                                                                  --------->At4g35610                                                             <---------ANAC55(2)                                                             --------->ANAC55(1)                                                             --------->ANAC58                                                             --------->ANAC58                                                             --------->ANAC46                                                           <---------ALFIN1                                                          <---------REM1(2)                                                         <-----------HVH21                                                        --------->ANAC46                           <-----------RAV1(1)          ----------->HVH21                  <---------ARR14(2)                    --------->ANAC58                  ------->TEIL                          <---------ETT(1)                  --------->ARR14(2)             --------->At4g35610                  <---------ARR11(1)             <---------At4g35610           >>>>>>>>>TAC1                 <---------CCA1(2)      <---------ANAC46--------->ANAC58       <-------GAMYB                 <---------ARR14(1)    <------NtERF2 --------->ARR14(2)    ------------>AtMYB77               <---------ANAC58     <---------ZAT18  <---------ARR14(2)   --------->ETT(2)       ----               <---------ANAC58 <---------AtLEC2 --------->ZAT2   <---------At4g35610<------ZmHOX2a(2)   cccaagatgatgagttttcgtatctgttcttgttgcagggcagcctgtatcagcagacccgacacgcatgctgacatcgacagttggatcaacttcgcca  795700  Previous    Next  AGI:  At3g03356.1    Description:  unknown protein Range:  from: 794914    to: 795039    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g03360.1    Description:  F-box family protein. Identical to F-box/LRR-repeat protein At3g03360 [Arabidopsis Thaliana] (GB:Q84W80;GB:Q0WMB7;GB:Q9SRP0); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G02910.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83117.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 795225    to: 796925    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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