Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     ----------->GT1                               --------->YAB1                               --------->ATHB12                               <--------HAHB4                               <---------ICU4                                            --------->ANAC58                               -------->ATHB1                                            --------->ANAC58                              <---------ATHB12                                    <---------ATHB12  < -----TOE2(2)                 --------->ICU4           --------->TOE2(3)     <---------At4g35610    - -----TOE1(2)           --------->MYB52(1) --------->CCA1(2)         <---------------AGL15<------NtERF2 ------RAV1(2)   ----------->GT1--------->TOE2(3)--------->ALFIN1    ================================   ggtttttgccaatgcaagatggaaataaacgaatcattagttaatatacaagtggtaccttgaaatgcttccaatatagagctaatgaagccagcaagac  775800                                                 =====================================HOX2a_HOX2a                                                 ------>ZmHOX2a(2)                                        <---------DEAR3(1)                                     <---------DEAR3(1)     --------->LBD16                <---------At4g35610    --------->ANAC46  --------->HSFB2a(2)      --------->ARR11(3)  --------->WRKY18(1)       --------    --------->HSFB2a(2)     --------->MYB52(1) <---------ARR11(3) <-----------HVH21    -------->P   ----------------->AG  --------->YAB1<------NtERF2             --------->LBD16    <---------ANAC58 ---------GLK1(1)     --------->HSFC1(1)<---------ANAC46        --------->LBD16     <---------ANAC58 -------->GLK1(1)     <---------HSFB2a(2)<-------GAMYB         <---------LBD16   <----------DOF2 ====================MADS_MADS      --------->At4g35610        --------->LBD16 ------>ZmHOX2a(1)   cgatttccgaaacagtcttctgttcgagaataacagtgagcggcgttgtgatctcttcttccttccccggtcatggtcatcctctttcttaccagagaca  775900                                                    --------->ANAC58              <-------MYC3                                                    --------->ANAC46              ------->MYC3                                                    --------->ANAC58             --------->TGA1a                                                --------->ANAC58                 <---------TGA1a                                            --------->ANAC58                     <---------O2                                            --------->ANAC46                    ------->MYC3                                            --------->ANAC58                    <-------MYC3     ----           <----------DOF2       -------->P================================================MYC_MYB---          ------>ZmHOX2a(2)    --------->MYB46(3) =========================================MYC_MYB<--         <---------YAB1       <---------At4g35610 ------->GAMYB        ====================bZIP_DOF        --------->ARR11(3)    --------->At4g35610--------->MYB46(3)    ---------->DOF2      ---------        <---------ARR11(3)   --------->ANAC46   --------->ANAC58   <----------ID1--------->O2 ------- ---->AtMYB77      <---------GLK1(1)       ------->GAMYB    <---------------------WRI1  <------ZmHOX2a(2)   gttcgaatgtgatctttgtagatttctctctcagcaaccagacaacacacaaccaagacactggggataacaacaaagaccacatgtgggatcaccacaa  776000                                                          <---------MYB55(2)                                                          --------->MYB46(3)                                                         ------>MYB83                                                         ------>MYB46(1)                                                         --------->ANAC58                                                         --------->ANAC58                                                 --------->ANAC58                                                 --------->ANAC58                                              <---------At4g35610                                              --------->ZAT2                                      <--                                              <---------ZAT2          --------->YAB1              ---      <-----------RAV1(2)                ----------->RAV1(2)   ----------------->AG           ------- ----->MYB46(3)                         ------>NtERF2  --------->AtMYB61                   --------->LBD16 ------>YAB1                      <---------ARR14(2)   <---------ALFIN1                   --------->HSFB2a(2) -------ICU4                      --------->ARR14(2)   --------->DEAR3(1)              --------->ETT(2) >AtMYB61                        ------>ZmHOX2a(1)    --------->MYB46(3)      ------->TEIL<---------HSFB2a(2) -->MYB46(3)                     <---------CCA1(2)<-----------HVH21--------->YAB1      <---------ETT(2)   ccattacatcaggttgtccaatgtattcatgtttcctatctgcgcctgagctcgtcaccacccatcccataatagtcatgtatgctctgtctccagaatc  776100                                                                  ------>MYB83                                                                  --------->ANAC46                                                                  ------>MYB46(1)                                                                <---------MYB59          <---------LBD16                                       --------->AtMYB61       <---------ZAT14                                         --------->MYB46(3)--------->At4g35610       --------->ZAT14                                       ------>MYB46(1)     <---------At4g35610      <-----------HVH21                                      ------>MYB83        --------->ZAT14     --------->ANAC46   ---------->DOF2                    ------->GAMYB --------->ANAC58        ----   <---------ALFIN1  --------->ANAC58                      <---------MYB59       <---------ZAT14 <--- -------At4g35610    --------->ANAC58                   <-----------GT1  --------->ANAC58        ---- ------>At4g35610  --------->TOE1(2)                 --------->AtLEC2--------->AtMYB61 <---------ARR11(3) -->GLK1(2) --------->LBD16  --------->GLK1(2)     <---------ANAC46 --------->MYB46(3) --------->ARR11(3)   agcaaacacttcaccggagaaccaaggaaagaatatgagatagaacaagtatgccatgtaaccgaaccaaaccacaggcattctgcagaggtcttggaga  776200                          <---------ANAC58                       ------>ZmHOX2a(1)                       <----------DOF2                     <-----------------AGL1       <---------ZAT14             <---------YAB1                       <---------ZAT18                  <---------LBD16  --------->ANAC46   *TSS <---------ANAC58      <---------------AtSPL3         ------->TEIL ----->ARR14(2)   <------MYB46(1)    ------->TEIL --------->ZAT14        <---------YAB1 ------ARR14(2)   <------MYB83------------>CBF  <---------------AtSPL8 --------->YAB1 ----->GLK1(2)   --------->MYB59  <---------ATHB12--------->ZAT18     --------->ICU4             <---   atccacagtacaagtgtgataggtcctttcttggcaatgaacttcttgagagtgtactgcttcttgaaaacgatgatgatgcatttggggataagaaaaa  776300                                                       ----------------------->TaNAC69(2)                                                  <---------ALFIN1                                                 --------->MYB46(3)                                                 --------->DEAR3(1)                                                --------->ATERF1(1)                                               ------>NtERF2        --------->ANAC55(1)                                              --------->RAP2.6(2)   --------->ANAC58                                              <---------ATERF1(2)   --------->ANAC55(2)                                       <---------AHL20(1)           <---------ANAC55(2)                             --------->GLK1(2)--------->DEAR3(1)    --------->ANAC58                             <---------ARR14(2)<---------ATERF1(1)  --------->ANAC46                            <---------GLK1(2) --------->ATERF1(2)  <---------LBD16                    --------->ANAC58   <---------AHL20(2) <------NtERF2 --------->GLK1(1)     <------         --------------->AGL15         --------->AHL20(2) --------->At4g35610              ------->TEIL         <---------------AGL15   ----------->GT1<------NtERF2  ----------->HVH21        --------->ANAC46 -------ID1         --------->ANAC58   --------->AHL20(1) <---------At4g35610           --------->AtLEC2   cgagaaacaaactatatagagcaggccaaagaatcgggtaatataatgccgcccactggcagcccatgacacggaactcattccatgtccatgaaacttt  776400                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                       ----------->GT1                                             <-                                      <---------TOE2(3)                                       -------                                      <---------TOE1(3)                                      <-------                                      --------->DAG2                                   <-----------HVH21                                 <---------YAB1                                       --------->WOX13(1)                              <---------ARR14(2)                                   <---------ARR11(3)                             <---------GLK1(1)          <---------GLK1(1)          --------->ARR11(3)                             --------->GLK1(1)     <----------DOF2           ------>NtERF2 <---------ANAC55(2) ----DOF2                   <----------DOF2  <---------At4g35610 <---------ANAC46  --------->GLK1(2)<   agagcttagaccattgatggaaaatggtcgcatttctgataaggttaatctgcctttgatatcagtgacttctatttgcagccaaaatctatcaggtaag  776500                                                          <---------ARR14(2)                                                          <---------GLK1(2)                                                       >>>>>>>>>TBF1                                                    >>>>>>>>>TBF1               <---------YAB1                  --------->LBD16 ------>ZmHOX2a(2)                            --------->LBD16 ------->ARR14(3)                             --------->HSFB2a(2) --------ARR11(3)                             --------->ANAC46 ------->ARR14(2)                             --------->ANAC58 ------->ARR11(3)                             <---------HSFB2a(2)                           <-------- --------ARR14(2)                             --------->ANAC58                      --------->At4g35610 -->MYB52(1)   <---------ATHB12       <-----------RAV1(1) --------->ARR14(2) --------->ATHB12     <-- -P  ---------->DOF2       ----------->GT1   <---------LBD16                <---------YAB1 ---------- ------ZmHOX2a(2)      --------->AtLEC2      --------->LBD16     ------>NtERF2      <---------At4g35610   ggatcttcaaaggccctataattccatggaagtgaaaagaatgttgccccggaagaagaagaatcgcctccatgttttctcattggagcttccatgacca  776600                                                                                            ---------                                                                                  <-----------HVH21                                                                                 <---------ANAC58              <---------ANAC58                                                   --------->ANAC55(2)      --------->ARR14(2)                                                         <---------ANAC55(2)      <---------ARR14(2)                     --------->MYB46(3)                  <---------ANAC46 --- -WRKY18(1)   <---------ANAC58             <---------HSFB2a(2)                   <---------ANAC58 <-- -------GLK1(2)      --------->YAB1        --------->HSFB2a(2)  <<<<<<<<<<<<<<<<<LFY <---------SPL7<- ->HVH21  --------->LBD16           --------->REM1(1)     ----------->GT1  <---------YAB1  --------->ICU4   gattatcaaatccagggcttgagtcataaactctagctacaacttccacaaccagagaatgagaaaaaacaatggctcttattgcgtcatacgatgatga  776700  Previous    Next  AGI:  At3g03300.1    Description:  DCL2 (DICER-LIKE 2); ATP-dependent helicase/ ribonuclease III. similar to DCL4 (DICER-LIKE 4), RNA binding / ribonuclease III [Arabidopsis thaliana] (TAIR:AT5G20320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22931.1); similar to CAF protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD34005.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77284.1); contains InterPro domain Argonaute and Dicer protein, PAZ (InterPro:IPR003100); contains InterPro domain Protein of unknown function DUF283 (InterPro:IPR005034); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains Range:  from: 767933    to: 776221    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g03305.1    Description:  calcineurin-like phosphoesterase family protein. similar to hypothetical protein OsI_004650 [Oryza sativa (indica cultivar-group)] (GB:EAY76803.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17816.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44992.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) Range:  from: 775375    to: 778403    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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