Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->At4g35610                                                                  --------------------->WRI1                                                                 ------>ZmHOX2a(2)                                                                <---------GLK1(1)                                                                <------ZmHOX2a(2)                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                  ---------->DOF2              <---------AGP1                         --------->GLK1(2)                     <---------ARR14(3) ----->ANAC58            <---------ARR11(3)   --------->MYB46(3)--------->GLK1(1) ----->ANAC58   <---------HSFB2a(2)      --------->ANAC58      --------->ARR11(3) ---->DAG2      --------->HSFB2a(2)      --------->ANAC58      --------->ARR14(3) ---->DOF2--------->ZAT6 --------->ARR14(2) ----------->RAV1(1)<---------ARR11(3)                  <-   agcaagatgcgaagactactggaacaaaatctgaagaaaagagaggcaacaacttacaatctcaagatctctgagagcatcggccatggcaatattggtc  723500                                                 <------ZmHOX2a(1)                                        ================HOX2a_HOX2a                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                       <---------GLK1(1)                                      --------->ARR14(2)                                      <---------ARR14(2)                                      --------->ARR11(3)                                      <---------ARR11(3)                                      <-----------ARR10                                      --------->ARR14(3)                        --------->HSFB2a(2)   <---------HSFB2a(2)                   ------>ZmHOX2a(1)  <---------ARR14(3)                   ===========================HOX2a_HOX2a                   ============================HOX2a_HOX2a              <------NtERF2                  <---------------AGL15=================HOX2a_HOX2a    ------>NtERF2                  --------------->AGL15--------->GLK1(1)     <---------GLK1(1)    <---------ANAC46    <---------HSFB2a(2)   --------->HSFB2a(2)     <----------ID1             ---- --------ICU4  ---------->ID1         <---------AGP1         --------->GLK1(1)                  -----   atattggctgggattttgttcctcttacagaaaaattgaagatctcttcgaggaagactgtggaaatccatggcgacgaattagagaaaatgaaaacaaa  723600                                                                            <---------CCA1(1)                                                                            <---------RVE1(1)                                                                           <---------ARR11(3)                                                                           --------->ARR11(3)                                                                          <------ZmHOX2a(1)                                                                     <---------REM1(1)                                                                --------->LBD16                                                              ------>ZmHOX2a(2)                                                              ===================HOX2a_HOX2a                                                             ====================HOX2a_HOX2a                                                             --------->ARR14(1)                                                             --------->CCA1(2)                                                             <------ZmHOX2a(2)          <--------P                                        <---------ARR14(2)      ------>ZmHOX2a(2)                                     --------->ARR11(1)    --------->ARR11(3)                   --------->ARR14(2) --------->ARR14(2)         <---------MYB52(1)    <---------AGP1      <-------GAMYB    <---------ARR14(2) <---------ARR11(3)    <-----------GT1 ----->DAG2             --------->At4g35610             ---------->DOF2 <---------TOE2(3) ----->DOF2             <---------At4g35610          *TSS   --------->ARR11(3)<-----------TBP   aagtttgatctggttgagaaaatgacagttgaaaaacaagacgtttctgctatgtctctaaagatccgaagatgaaggatatttataccattaggcgaac  723700                             <-------GAMYB                          <---------At5g28300                        ----------->HVH21                      ===============MYC_MYB                      <---------O2                      <---------TGA1a                 --------->ZAT18                 <---------ZAT18                  <---------AHL20(2)                <---------ANAC58    <---------ANAC46                <---------ANAC46    ----------->GT1<---------AHL20(2)                   --------->TOE1(2)                <---------ANAC58   --------->At4g35610                                 ----------->GT1   --------->TOE2(3)  --------->TGA1a             --------->AHL20(2)         <---------CCA1(2)   --------->TOE1(3)  --------->O2 <---------At4g35610               ---------->DOF2   ------>ZmHOX2a(2)   ataaaccctaactcccttgcgcacaagtgaccgttgcagcgtaaattttgaatttaatgggcctaaaatataaaagcccatattttggatcgtaagatgg  723800                         ------->MYC2                         <-------MYC2               <------------CBF                         ------->MYC3             --------->AHL20(1)                         <-------MYC3             <---------AHL20(2)                         ------->PIF4             --------->AHL20(2)                         <-------PIF4      ----------->GT1             ----------->GT1              ------->MYC2             <---------ANAC46             <-------MYC3                    --------->YAB1            <-----------------------TaNAC69(2)   --------->AHL20(2)      <---------ATHB12           <---------DOF5.7(2)            ------->MYC3                   --------->MYB46(3)         --------->DOF5.7(2) <----------DOF2     <---------AHL20(2)  ------------>CBF*TSS       --------->MYB59   <-------PIF5     <-------MYC2              --------->ANAC58 --------->LBD16     --------->ARR14(1)  ------->PIF5    <---------ANAC58           --------->ANAC58<---------HSFB2a(2)   --------->ATHB12     --------->ANAC58 <---------ANAC46        --------->ZAT2     --------->HSFB2a(2)  <---------YAB1        --------->ANAC58 <---------ANAC58        <---------ZAT2    <---------LBD16  <---------ATHB12---------->DOF2   <------ZmHOX2a(1)<---------WOX13(1)--------->WOX13(1)<------ZmHOX2a(1)   gcctatgattcggtaacgtagaaagcacgcgctcttgaggagcgcgtgtaaattaattgaactgcgaagctcgcaatcaccatcatccggaggagagaga  723900                                                           <---------TOE2(2)                                                           <---------AtMYB61                                                          <------NtERF2                                                         --------->LBD16                      <---------TOE2(2)                 --------->ALFIN1                 <----------ID1                  <---------LBD16                      <---------LBD16                  --------->SPL7                 --------->MYB52(1)                 <------ZmHOX2a(1)                  <------ZmHOX2a(1)               <-----------HVH21              --------->CCA1(2)                  --------->CCA1(2)   gagagagaaggcgaaagagtcacggaggtttcagagagaacgagagagagacgaggacgcggaggtttcagagagaacgagagagacgaggacgacgaga  724000                                                                     --------->DOF5.7(2)                                                                    <----------DOF2                                                                   <---------ANAC46                                                                ------->GAMYB                                                               --------->MYB46(3)                                                              -------->P          --------->STY1(2)                                  ------>MYB83          <---------STY1(2)                                  ------>MYB46(1)  <---------SPL7          --------->ZAT2                                     --------->MYB52(1)         ------->TEIL                                      <---------MYB46(2)<---------ANAC58      <---------ANAC58                                     <---------MYB59   <---------ANAC58      --------->ANAC46              --------->DAG2      <-----------GT1---------->DOF2      --------->ANAC55(2)          ---------->DOF2----------->GT1--------->LBD16      <---------ANAC55(2)   ----------->GT1      --------->DAG2<------------AtMYB77      <---------ANAC58     <---------DEAR3(1) <------ZmHOX2a(1)--------->DEAR3(2) <---------ZAT6 ----   actcgcttacgtagctagcttatagagggacggtggaaaaagtagagaggaaaggttttaacctaaccggcgttaaagagcgtagggttatgggagtttt  724100                                                                                    <-------TEIL    <                                                                                  --------->ARR14(2)<                                                                                  <---------ARR14(2)-                                                                               --------->LBD16      -                                                                               ------>NtERF2        <                                                                             <---------LBD16        <                                                                            ------>NtERF2           <                                                                          --------->MYB46(3)        <                                                               <---------AtMYB61<------NtERF2      <-           ---------->DOF2       <-----------GT1           <-------GAMYB  ------>ZmHOX2a(2)        --      <---------AtLEC2        <---------ARR14(2)           <---------At4g35610--------->LBD16    ---- <---------ARR14(2)           <---------GLK1(2)   <---------MYB52(1)      --------->ATERF1(1)    <--- --------->GLK1(2)            --------->ARR14(2)<---------ANAC46         <------ZmHOX2a(2)      <---- --------->ARR14(2)         --------->LBD16     <---------ANAC58        <---------ARR14(2)     ------ ------------->AG         <---------LBD16       <---------ANAC58        --------->ARR14(2)    <------   ccaaatctgaatggaaagcttagttctcgccggattcacttccttctcttccgtctgtttcagttgtggttttggatccgccgggattcgtctgtattac  724200       <---------At4g35610       <---------ZAT2       --------->ZAT2       --------->At4g35610      --------->ARR14(2)      <---------ARR14(2)     --------->ATERF1(1)     <------NtERF2    --------->LBD16   <---------DEAR3(1)   --------->ALFIN1   <---------ANAC46  <------NtERF2  --------->At4g35610  <---------LBD16  <---------ABI4(1)  --------->ATERF1(1)  <---------At4g35610 <---------RAP2.3(1) <---------ORA47(2) ------>NtERF2 <---------ATERF1(1) <---------RAP2.6(1) <---------ERF1 <---------RRTF1(1) <---------DEAR4(2) ---------DEAR3(1) ---------ATERF1(2)                                                                           <------ -------->DEAR3(1)                                                                         ---------- -------->ATERF1(2)                                                                      --------->MYB52(2) ---------RAP2.3(3)                                                                    <--------P ---------RRTF1(3)                                                                    <-------GAMYB ---------RRTF1(2)                                                                --------->ALFIN1 ---------RAP2.3(2)                                                             <---------ANAC58 --------ABI4(1)                             --------->ARR11(3)             <---------ANAC58  <------ ------->ATERF1(1)                           <---------GLK1(2)              <---------ANAC46  <------ ----->ATERF1(2)                    --------->TOE2(3)           --------->ZAT18 <---------ANAC58 ------ATERF1(2)        <------ZmHOX2a(2)    <---------ARR11(3) <---------ZAT18 <---------ANAC46 -----LBD16          <-------TEIL--------->MYB52(1)<---------ANAC58         <---------ANAC58  <------ --->MYB52(1)       <--------P--------->ANAC46     <---------ANAC58      <---------TOE2(3) ---------- -----GT1        <---------TOE2(3)  ------->GAMYB  <---------ANAC46 <----------DOF2  <---------MYB46(3)   cggcggcggagctgattttcaggtagatcaatacacaaccgtagaaagatttttcttggagaatggtggacttttgaggcttgtgtgtggttagtgacgt  724300                                                                                <---------WOX13(1)                                                                               <---------ANAC46                                                                              <---------MYB46(3)                                                                              --------->ATHB12                                                                            <--------P                                                                           <-------GAMYB                                                                          <---------MYB46(3)                                                                          ----------->GT1                                                                        <-------TEIL                                                                       --------->ALFIN1                                                                     --------->At4g35610                                                                     <---------At4g35610            <                                                                     --------->ZAT2                 <                                                                   ===============================RAV                                                                   <-----------RAV1(2)              <                               <---------ZAT14                    <------ZmHOX2a(2)                 <                               --------->REM1(2)                 <---------ARR14(2)           =======   <---------GLK1(1)        <---------ANAC58                     --------->ARR14(2)           ======= ---ANAC46                  <---------ANAC58                     <-----------HVH21    <-----------RAV1(1) ->TGA1                     <---------ANAC46             --------->ANAC58<---------DEAR3(1)<---------PCF2 ---bZIP60(2)         <---------ARR11(3)                 --------->ANAC58<---------RAP2.6(2)  ------>ZmHOX2a(2) ---ANAC58            --------->ARR11(3)        --------->ANAC58<------ZmHOX2a(1)     --------->ALFIN1 ---ANAC58    ---------->DOF2  --------->ZAT14  --------->ANAC58=====================================HOX2a_HOX2a ->HVH21--------->LBD16 ------>ZmHOX2a(2)   --------->CCA1(2)<---------LBD16<---------MYB52(1)=======   agaagaaacccgtagagaaagtgtgatcttgagtgtagagagggagagacaaggatggcaagtccaggatcaggtgcggttgattggactgtgggatcga  724400  Previous    Next  AGI:  At3g03130.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G17160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62214.1) Range:  from: 721298    to: 723653    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g03140.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G21295.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77845.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62215.1); contains InterPro domain PWWP (InterPro:IPR000313) Range:  from: 723885    to: 727509    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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