Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                                                       <---------HSFB2a(1)                                                                                       --------->HSFB2a(1)                                                                                       <---------ZAT2                                                                                       --------->At4g35610                                                                                       <---------HSFC1(2)        <----------DOF2                                                                <---------At4g35610  <---------ARR14(2)                                                                   --------->HSFC1(2)  <---------ARR11(3)                                                                <------ZmHOX2a(1)  --------->ARR11(3)                                                     --------->AHL20(2)   -------  --------->ARR14(2)                                                     <---------AHL20(2)  ------>NtERF2 <---------CCA1(2)                               <---------YAB1       --------->ARR11(3)  <---------ZAT2 -----MYB46(1)                         --------->ATHB12               <---------ARR11(3)  --------->ZAT2 -----MYB83  <-----------GT1          <---------YAB1        <------ZmHOX2a(1)     <---------TOE2(3) ------WOX13(1)--------->ANAC46       <---------ATHB12    <---------TOE1(3)   --------->At4g35610   ttggtatcttcttttataccacatttcatcaaaaactctaatgaatggattatttttgttcaggataacaaagatttatatgctgaggaagctgctgccc  716800                                                                            --------->GLK1(2)                                                                           --------->ARR14(2)                                  --------->LBD16                          <---------GLK1(2)                        <----------DOF2     --------->At4g35610            <---------ARR14(2)               ---------->DOF2    ------>ZmHOX2a(1)                <---------bZIP60(2)           <----------ID1        <---------LBD16                --------->ANAC58 ----------->AGL1      <---------ANAC58     <---------At4g35610 --------->ANAC58 ---------->AGL1       <---------ANAC58  ---------->DOF2        --------->ANAC46                   <-   aaatggagagagagagacaaagaatgctttcgattcctggacttatagctcccagcgaaattcaagacgacatggccgattcttaagtcttgtttttata  716900                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                <---------ARR14(2)                                                <---------ARR11(3)                                                --------->ARR14(2)                                                --------->ARR11(3)                    <------MYB46(1)                                                --------->AGP1                        <------MYB83                --------->HSFB2a(2)             <---------ARR14(3)                   --------->MYB59                <---------HSFB2a(2)             --------->ARR14(3)        <----------ID1   --------->YAB1     ----------->GT1          <---------GLK1(1)        ---------->DOF2 --------AHL20(2)   ---------->DOF2 <---------AHL20(2)        ---------->DOF2    <---------ZAT6   <--   ttttataagaagaaggctctcgaaaagagaaatggaattttttttgtagagatcttgagaaatggaaagcttagaaaagacaagtgttaggttttctaaa  717000                                                         --------->AHL20(2)                                                         <---------AHL20(2)                                                        --------->AHL20(2)                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                                --------->GLK1(1)                            --------->AHL20(2) --------->ARR11(3)                         --------------->AGL15 <---------ARR11(3)                         <---------------AGL15 <---------ARR14(2)                        <---------YAB1         <---------AGP1             ----------->GT1          <-----------RAV1(1)<---------AHL20(2)--------->ARR14(2) --------->TOE2(3)     <----------DOF2  <-----------GT1         <------ZmHOX2a(1)   --------->TOE1(3) ---------GT1      ----------->GT1          <---------TOE2(3)   ------->TEIL     <-----------GT1   ttacaatcttttttgttggatttgttactattaaatgaaaaatgtttaggatctcaaaattaatcgaacctcaaaccggttataaaccggtcttaatttc  717100                                                                                           <---------                                                                                           <---------                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                     --------->TOE2(3)                                                            *TSS               --------->ANAC46                                                            <------ZmHOX2a(1)  --------->ANAC58                                                          --------->ANAC58     --------->ANAC58                  <---------AHL20(2)          --------->ZAT14                ---------->DOF2                 --------->YAB1               <---------ZAT14               <---------ARR14(2)<------           ----------->GT1           <---------GLK1(2)    --------->ANAC58  --------->ARR14(2)<------   aaagacttgtaaaccgaaataaaaatgtaagaccaagtggaatctctctatactgtacataaggaatccattgtaccgaaaacgcaacctttgctttctt  717200                              --------->AtMYB61                       --------->GLK1(1) -DOF2           ------>ZmHOX2a(1)           <----------DOF2 ------AGL15     --------->LBD16      <---------YAB1 ---ANAC58      <---------LBD16  <---------ICU4  <---------GLK1(2) ---ANAC58   <---------ARR14(2)  --------->YAB1----------->ARR10      <----------DOF2<---------AtMYB61   gggaaactctctgcaattcctggagaaatcgaccatcatcatcttagctttgattctctctgtgtttcttcactttcaatttctgttttggtttatcgat  717300                                                     --------->WRKY18(1)                          ---                                          --------->ALFIN1            <---------DAG2            <----                                <----------DOF2    ----------->GT1    <----------DOF2        <-------                <---------DEAR3(1)      <---------ANAC58           --------->ANAC58        -------->P            <-------TEIL     <---------TOE1(3) --------->CCA1(2)   --------->ANAC58    --------->HSFB2a(2)    ----------->GT1--------->ALFIN1     <---------ANAC46   <---------DAG2      ----------------->AGL1  ---------->DOF2<-----------RAV1(1)    <---------ANAC58   <----------DOF2     <-----------------AGL1   aagagaaagtaaaattcgtctgtgggggtttaagcttttttggggtgagagatgggtcaaacttttcgcaagcttttcgataccttcttcggcaaccagg  717400                                                                      <---------ANAC58                                                                      --------->ANAC55(2)                                                                      <---------ANAC55(2)                                                                      <---------ANAC58                                                                 <---------ARR14(2)     --------->ZAT18                                             --------->ARR14(2)     <---------ZAT18                                             <---------GLK1(2)       --------->YAB1   <---------------AtSPL8                                     --------->ANAC46      <---------MYB52(1)   --------------->AtSPL8                                     --------->ANAC58     --------->TOE2(3) ------>At4g35610                                  ------>ZmHOX2a(2)  <---------ANAC46   <---------ICU4 --ZmHOX2a(1)                        <---------GLK1(1)        --------->ANAC58--------->MYB46(3) ----RAV1(2)  ------>ZmHOX2a(1)   <---------AHL20(2) --------->DOF5.7(2)   <-----------GT1   agatgagggtactctccttctctccatcttctgtatttgatttctgtatttgatcgtttactggacggaatcgcgtgttacccatcgttaatcgttatac  717500                                                                             --------->TOE1(2)                                                                             <---------LBD16                                                                             --------->TOE2(2)                                                                            ----------->RAV1(2)                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                         --------->ARR14(2)                               ------->TEIL                         <---------ARR14(2)                      --------->ATHB12        <---------AHL20(2)               <---------bZIP60(1)                               <---------ICU4         --------->AHL20(2)               --------->bZIP60(1)                               -------->ATHB1     --------->ICU4               --------->ANAC46                     --------->ATHB12  <---------TOE2(3)<---------YAB1             <-----------GT1                --------->DAG2       --------->YAB1<---------TOE1(2)   <---------YAB1        <---------GLK1(2) ---------->DOF2      --------->ICU4--------->LBD16 --------------------->WRI1            <---------YAB1           <---------ATHB12    --------->AHL20(2) <----------DOF2  <---------ALFIN1 --------->AHL20(2)           <---------YAB1------>ZmHOX2a(1)   tcgctttcattgttttgacgacactcggattttgaaataatatgaaaaagtgtttgatttgtgctaatcattgatgtatcctgggatttattatatgttc  717600                          <---------YAB1                  --------->LBD16                         <---------TOE2(3)                  ----------->GT1                         --------->MYB59                <-------TEIL<---------ANAC58              <---------------AtSPL8            --------->MYB59 <---------ANAC58   <---------ANAC58                                 <----       <----------DOF2 --------->ARR14(2)      <---------ANAC58                                 -----       <---------DAG2  <---------ARR14(2)     <---------STY1(2)                                 <----    <-----------GT1<---------MYB52(1)         --------->STY1(2)          <-------TEIL          ------ ----------->GT1<---------LBD16     --------->TOE2(3) <----------DOF2   --------->CCA1(2)      <-----   aaagagttactttttaggtccggtatatatgcttgtaatctaaactcttgctagtacttttaggtaccctgaagattcaagttcccttctactatagtat  717700  Previous    Next  AGI:  At3g03110.1    Description:  XPO1B (exportin 1B); protein transporter. similar to XPO1A (exportin 1A), protein transporter [Arabidopsis thaliana] (TAIR:AT5G17020.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ73248.1); similar to hypothetical protein OsJ_010402 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26919.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61845.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Exportin-1/Importin-beta-like (InterPro:IPR013598); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Exportin 1, C-termina Range:  from: 708943    to: 717100    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g03120.1    Description:  ATARFB1C (ADP-ribosylation factor B1C); GTP binding. similar to ATARFB1B, GTP binding [Arabidopsis thaliana] (TAIR:AT5G17060.1); similar to ADP-ribosylation factor [Daucus carota] (GB:AAW67545.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain ADP-ribosylation factor; (InterPro:IPR006688) Range:  from: 717160    to: 719322    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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