Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <-------TEIL                             <---------------AtSPL8                             --------------->AtSPL8                             <---------TOE2(3)                             --------------->AtSPL3                            --------->DAG2                           ---------->DOF2                        --------->YAB1                                          <-----------------AGL3                       <---------ATHB12       <------ZmHOX2a(2)    <---------ICU4<---------------AGL15                       <---------YAB1 <---------ARR11(3)    ---------->DOF2--------->ICU4   tgtaagtaagagaaaatcacttctaatcataaaggtacaatttcttagatcacacagtattcaaaagaaacattgcaatgtttctaaatttgaaaacaac  699900                                                                     --------->ANAC58                                                                     --------->ANAC55(1)                                                                     --------->ANAC46                                                                     <---------ANAC55(2)                                                      --------->MYB46(3)                            <                                                      <---------MYB52(2)                            -                                                 ----------->GT1     ----------->GT1             ----                           --------->ARR11(3)  --------->ALFIN1      --------->ANAC55(2)   --------->LBD16                         <---------ZAT6       --------->TOE2(2)      --------->ANAC58     --------->ANAC46                       --------->YAB1         <-------MYC3      --------->ANAC58          <---------ANAC55(2)                  --------->AHL20(2)          ------->MYC3  --------->ANAC58              --------->ANAC55(2)                  <---------AHL20(2)          --------->TOE1(2) --------->ANAC58          -----------       <-------TEIL<---------YAB1       --------->ANAC46    --------->ANAC58             ------>ZmHOX2a(2)   gtttccaaattcatctctgttttaatagtgatattgttttgcacaaaacgtgggtaacaaacaagctcgaaacgtaacaaaatcgtgttgatccgtaaca  700000                                                                                ------>ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                            <------NtERF2                                                                           --------->LBD16                                                                           ------>NtERF2            <---------ZAT14                                               <---------ANAC46            --------->ZAT18                                               <---------LBD16         <---------ANAC58                                          <---------At4g35610         <---------ANAC46                                          <---------ZAT14         <---------ANAC58                   <------ZmHOX2a(1)      --------->ZAT14        <-------TEIL                      --------->LBD16          --------->ZAT2   <---------ANAC58      --------->TOE1(2)                  <-----------RAV1(2)       --------->At4g35610   <<<<<<<ZML2                        --------->ANAC46             <---------ZAT2   <---------ANAC58 ---------HSFB2a(2)                   --------->ANAC58            ----------->RAV1(1)            <--- -------->HSFB2a(2)                   --------->ANAC58          --------->ZAT18 ===================== ----->GLK1(2)       ------->TEIL ------->TEIL        --------->ALFIN1   <---------LBD16         ---- >GT1 --------->TOE2(2)          <-----------GT1    <---------ANAC46   --------->ALFIN1        <XXXXX   atctagaacatgcgtgaactatggacgtcgtttttgtacctcgccaggaatgtaatgtggagcgagcgcagcagtgccgggatcgggcttccccatgcga  700100                                                                    --------->AHL20(2)                                                                  <----------DOF2                                                            --------->LBD16                                                           --------->HSFB2a(2)                                                          <---------LBD16             --------->ANAC58                         ------>ZmHOX2a(2)             ------>ZmHOX2a(2)                       <------ZmHOX2a(2)             --------->ANAC58              --------->HSFC1(2)  --------->GLK1(2)          <------ZmHOX2a(1)                <---------HSFC1(2) <---------GLK1(2) ------ARR14(2)  --------->ANAC58        <---------ARR14(2)--------->ANAC46                --------->ICU4 ================HOX2a_HOX2a  --------->GLK1(2)     --------->ARR14(2)       <---------MYB46(3) ----->ARR14(2)  --------->ANAC58        --------->ARR14(2)<---------HSFB2a(2)    <---------ARR14(2) XXXXXXXXXXXXXXXMIR2112-3P   <---------GLK1(2)      <---------ARR14(2)      <---------AtMYB61   atgcgcatgtaaggatcgcaagacaagtagagattcttcaccagaaccgtcttggatccctccggaatctttaaatcgatggtggaatcggtgaagatga  700200                        <---------TGA2(1)                        --------->TGA2(1)                        --------->ANAC58                        --------->bZIP60(1)                        <---------ANAC58                        --------->ANAC55(2)                        <---------ANAC55(2)                        <---------ANAC46                            <---------ANAC58                        <---------bZIP60(1)                <-----------HVH21                      <---------TGA2(2)                   --------->DEAR3(1)                     ----------->HVH21                   --------->MYB46(3)                      <---                     ----------->TGA1                    <------NtERF2                           <---                    <-----------HVH21                    --------->DEAR3(2)      <XXXXXXXXXXXXXXXXXXX               <---------ARR14(2)                       ------>NtERF2      <--------P            ----               --------->ARR14(2)                      <---------ALFIN1 <---------TOE2(3)   ---------       <---------ANAC58 --------->ANAC58        --------->ATHB12    <---------ANAC46      <----------       <---------ANAC46 <---------ANAC58       <---------YAB1       <---------ANAC58<-----------GT1       <---------ANAC58----------->STF1        <----------DOF2      ----------->RAV1(2)   <---------LBD16   ggtctgattccttggggaaaccggtgacgtaatctcgcagtatgacctgcttattggccaccgtcgcattgcctgaggttgccatttttctctccggttt  700300                                                   <------------CBF                                               <---------ANAC58                            --------->GLK1(1)                                     <---------TOE1(2)                              <--------ATHB1                                     <---------TOE2(2)                              --------->ATHB12                       <----------DOF2         <---------ANAC58                    <---------ATHB12    <----------DOF2   ==============================HOX2a_HOX2a                    --------->ICU4 ------TOE2(3)        ------>ZmHOX2a(2)        <---------ANAC55(2)             --------->SPL7 ------TOE1(3)        =====================HOX2a_HOX2a                      ----------->GT1<---------GLK1(1) XXMIR2933A/B        <---------YAB1 ------>ZmHOX2a(1)      <---------AHL20(2)  ------------>CBF ----- ----->MYB59        --------->ARR11(3)         --------->ANAC55(2)         --------------->AtSPL3 >LBD16 *TSS        <---------ARR11(3)       <------ZmHOX2a(1)    <----------DOF2  <---------YAB1   < -------AGL1 ---------->DOF2       --------->TOE2(2)     <-----------TBP   <---------------AtSPL8<---   aggttcctttaccacaaaagatgatctttgtgttcttcctacgttgaggacgtgattgtatttataggcttttgtgaatcgtacaatgatttgatttcct  700400                            --------->TGA2(2)                          <---------ANAC55(2)                          --------->ANAC55(2)                          <---------bZIP60(1)                          --------->bZIP60(1)                          <---------TGA2(1)                          --------->TGA2(1)         <---------ICU4                          --------->O2              --------->YAB1                          <<<<<<<<<<HY5            --------->ICU4                          <---------O2           <---------ICU4                          >>>>>>>>>>HY5          --------->YAB1                         ----------->STF1       <---------YAB1                <---------ANAC58                --------->ICU4          <---------TOE2(3)<-----------TGA1   --------->YAB1   --------->TOE2(3)    <---------TGA2(2)<---------ANAC58   <---------MYB59     ----------->TGA1  <---------ANAC58       ----------->GT1              ------->TEIL ->ZmHOX2a(1)   <---------ANAC58         <---------ANAC55(1) <---------ETT(2)       <---------AHL20(2) -----------GT1 <---------ANAC46   <---------AHL20(1)     ----------->HVH21        --------->AHL20(2) ------ICU4<---------YAB1<-----------STF1<---------ANAC46 ----------->TGA1      --------->YAB1   tatgaccttatttatgtttcttgttatgacgtcataatatgtttcgtgtaataataatcactgacgacgttacaatattgtttcataaaattttgaatct  700500                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                <---------ANAC58                                       ------->TEIL                                <---------ANAC55(1)                                  ------->GAMYB<--                                <---------ANAC55(2)                                 --------->ANAC58                                <---------ANAC46                                    --------->ANAC58                                <---------ANAC58     --------->ANAC58               --------->ANAC46-                          <---------YAB1--------->AHL20(2)                  <---------DAG2 ------>MYB83                --------->YAB1  --------->ANAC55(2)  --------->ANAC58       <----------DOF2------>MYB46(1)   cacattattttcatacaatcacaaaattttgaatgcgtgttttaaaatacaaattaagcaaactttcgaattttaaaacttttccaacgcaccaaatttt  700600                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                                  <---------MYB46(3)                                                                                  --------->MYB55(2)                                                                                  --------->ALFIN1                                                                                 <---------MYB55(1)                                                                                 <---------ANAC46                                                                                ----------->RAV1(2)                                                                                <---------At4g35610                                                                                <---------ZAT2                          <---------GLK1(1)                                   <---------RAP2.6(2)                          --------->GLK1(1)                                   <---------RAP2.3(2)           --------->MYB46(3)                  --------->LBD16             <-------MYC3 <----------DOF2       <-------TEIL       --------->CCA1(2)   <---------ANAC55(2)          ------->MYC3<---------ANAC46      --------->CCA1(2)  --------->ARR11(3)   --------->ANAC55(2)          <-------MYC2<---------ANAC58 <---------MYB52(1)      <---------ARR11(3)  <---------LBD16               ------->MYC2<---------ANAC58 -------RAP2.6(2)    ---------->DOF2      --------->KAN4(2)            <---------ZAT14<-------TEIL ----->NtERF2    <----------DOF2   ----------->GT1         ----------->HVH21 <---------LBD16       --   gccgctagatacaaccattctttaaaagatatccaaacagtgaaaattccgcgataaatggctgactagtgactacacatgcggctggtgcgtttgcgat  700700              ---------->DOF2             <---------ATHB12        --------->ANAC46        --------->ANAC58        --------->ANAC58     ------>ZmHOX2a(1)   ------>ZmHOX2a(2)  <------ZmHOX2a(2)               <---------At4g35610 <---------ARR14(2)               --------->At4g35610 --------->ARR11(3)           --------->ALFIN1 <---------ARR11(3)        --------->DAG2         <----------DOF2 --------->ARR14(2)       ---------->DOF2        <---------------AGL15 --------->AGP1     --------->At4g35610          <---------DAG2 <---------GLK1(2)  <---------At4g35610          --------------->AGL15                      ========= --------->ARR10   ----------->RAV1(1)        <-----------GT1            <---------ARR11(3) <--------   ttagatcctcaagcaatgaagcagcacagaaagtggagctaagatgagtaaccttttagagacatttggcttcaatttcttcaagagtgagaccctttgt  700800  Previous    Next  AGI:  At3g03080.1    Description:  NADP-dependent oxidoreductase, putative. similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61471.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085) Range:  from: 698537    to: 700308    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g03090.1    Description:  ATVGT1 (ARABIDOPSIS THALIANA VACUOLAR GLUCOSE TRANSPORTER 1); carbohydrate transmembrane transporter/ fructose transmembrane transporter/ glucose transmembrane transporter/ sugar:hydrogen ion symporter. Identical to D-xylose-proton symporter-like 1 [Arabidopsis Thaliana] (GB:Q8L6Z8;GB:Q9M9M8); similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT5G17010.1); similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT5G17010.3); similar to unknown [Populus trichocarpa] (GB:ABK95072.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Major facilitator su Range:  from: 700463    to: 704776    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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