Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->TOE2(3)                                                                     <---------MYB46(3)                                     <------ZmHOX2a(1)               <------MYB46(1)                     <---------HSFC1(2)                              <------MYB83         ----------->GT1         <---------TOE2(1)                   ----------->GT1        --------->ALFIN1  --------->TOE2(3)             ---------->DOF2    <----------DOF2     --------->DAG2  --------->HSFB2a(1)      --------->At5g28300   <---------TOE1(2)              <-    ---------->DOF2  <---------At4g35610 ----------->HVH21          <---------TOE2(2)             <--  <------ZmHOX2a(1)  --------->HSFC1(2) <-----------HVH21        <---------MYB46(3)              <--- --------LBD16      ------->TEIL <---------TOE1(1)  ----------->GT1<---------MYB52(1)       ---------   atcaggaaaagtggtgaacatgaagcttccttcatacgaggaggtcacagtaaatggtgaaaggaagtcgttggtaactttcttaacttggtttacatga  684300                                               <---------AHL20(1)                                               --------->AHL20(1)                                               --------->ARR11(3)                              <----------DOF2  <---------ARR11(3)                              <---------DAG2   <---------ICU4 ------GAMYB               <-----------GT1   <---------AHL20(1) -------MYB46(3)      <------MYB46(1)<---------At4g35610              ---------->DOF2              -- ------YAB1           <------MYB83   <-------GAMYB    <-----------RAV1(1)    --------->YAB1        -- >ANAC55(2)         --------->ALFIN1 --------->At4g35610       ----------->GT1                     --   tggttagagcaagtcgtttagagtgggttttactttttcagttgcataatattttcatgttgggattgaaataaaagtataatcacatgtatacaaaaac  684400                                      --------->AHL20(2)                                      <---------AHL20(1)                                      <---------AHL20(2)            <-----------HVH21         --------->AHL20(1)                        <---------ALFIN1           --------->ANAC55(1)       <---------AHL20(2)                        --------->ZAT14           <---------ANAC55(2)       --------->AHL20(2)                        --------->LBD16           --------->ANAC58      <---------AHL20(2)                            <---------ZAT18           <---------O2          --------->AHL20(1)                            --------->ZAT18           --------->O2          --------->AHL20(2)                          <---------LBD16           --------->ANAC58      <---------AHL20(1)                     <---------AHL20(2)           --------->ANAC46   --------->ATHB51                          --------->AHL20(2)           --------->TGA1a    <---------ICU4                            <---------AHL20(1)       <-----------GT1        --------->YAB1                            --------->AHL20(1)  ----------->GT1            --------->AHL20(2)       <---------ICU4   --------->AHL20(2) ---->MYB83--------->bZIP60(2)<--------HAHB4       --------->YAB1      ----------->TBP ---->MYB46(1)               --------->ICU4<---------AHL20(2)          <---------ATHB12 ------->MYB52(1)          --------->YAB1 --------->AHL20(2)       ------------>CBF    <---------CCA1(2)   caaacagtataacacgtcaaatcacattagaataattaattaaattttatcgataaaaatcaccaaaataccaataaattccgcactccgtctcttccag  684500                                                <------------CBF                                                <---------ARR14(2)                                                --------->ARR14(2)                                    --------------->AGL15                                    <---------------AGL15               <-----------RAV1(1)                                   ----------------->AGL1               <---------REM1(1)      ------                               <------------CBF--------->ATHB12 --------->ANAC58              <------  <-----------HVH21           --------->ATHB12<---------YAB1    --------->ANAC58            ---------   tctcagtcagtcgctattctctcatcgacgtttcattgccctaatttgaagattggcctctgtagcaaggtatgatgttgctctcagtctcaaaataaac  684600                                                                <---------ANAC46                                                              <---------ANAC46                                                             <---------MYB52(1)                               <------MYB83                <---------ANAC58                       --------->ARR14(2)                  <---------ANAC58                    <-----                    --------->ALFIN1                   <----------DOF2                        ------>ZmHOX2a(2)        <----------DOF2<---------ARR14(2)             <---------ANAC58                      <--------      --------->At4g35610      <------MYB46(1)        <---------ANAC58                      <-------- ------>CBF     <---------ANAC58            --------->ATHB12<-------GAMYB<-----------GT1    ------->TEIL -----GT1------------>CBF   <---------MYB52(1)    <----------DOF2     <---------AHL20(2)    --------- >AHL20(2)      <---------ANAC58         <------------CBF  <---------ANAC46 <---------------AGL15   aatctctctgcttcaatttcgagtggaactgtttggtttgggaaattgatttctttgctttgcgttgtgtatttttttctcttcagagaagatggatctg  684700                                                                                          <---------ANAC46                                                                                          <---------ANAC58                                                                                          <---------bZIP60(1) <---------At4g35610   <---------MYB52(1)         ---------->DOF2                         --------->ANAC55(2) ------RAV1(1)       <---------MYB46(3)   <---------ANAC58                                <---------ANAC55(2) -AGP1 <-----------GT1<-------GAMYB       <---------ANAC58       <---------ALFIN1         --------->bZIP60(1) -ARR14(2)           --------->MYB52(2)------>ZmHOX2a(1)    <---------At4g35610           <---------ANAC58 >ARR14(2)          <-------TEIL       <----------DOF2      --------->At4g35610        --------->ALFIN1   ttgagcagtttaccagacgaggttcgttgtcttatattgtcctttcttaccacaaaggagtctgcttccacatctgttctgtctaagaagtggcgtaatc  684800                                                          <--------P                                                 --------->LBD16                          --------->YAB1        --------->ANAC46  ---------->DOF2                   <                 <---------ICU4                 --------->HSFB2a(2)                        <---------ANAC46                 --------->YAB1                 <---------HSFB2a(2)    --------->CCA1(2)   <---------AtLEC2         ---------->ID1<----------DOF2         <---------LBD16 --------->LBD16            <-------TEIL   tgtttgcacttgtccctaatcttgactttgatgactctgagtttcttcatccggaagagggtaagcgggaaagagacggtattcttcagagtttcatgga  684900                                                                                                    <                                                                                                    <                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                        <---------TGA1a                    --------->ATHB12                                                        =============================================                                              --------->ARR11(3)               --------->ZAT2 <------                                              <---------ARR11(3)               <---------ZAT2 <------                                           <---------TOE1(2)                   <---------At4g35610  <                                          <---------MYB52(1)                 <---------ALFIN1 <------ ---------ANAC46                        --------->YAB1  --------->TGA1a    ------>ZmHOX2a(1) <-------   ttttgtggatagagtattgtctcttcagggcaattcttccattcgtaagttctctctcaagtgtgaaactggtgttcctccagctcgtgtgaatcgttgg  685000        --------->At4g35610     <---------At4g35610     <---------ANAC58     <---------ANAC58     <---------ANAC46 ---------ANAC46 ---------ANAC58 -----ANAC58 ---GAMYB -----ANAC58 -----ANAC46 ----MYB46(3) --->MYB52(2) -MYB46(1) --->MYB55(2)  <---------ANAC58                                  --------->At4g35610 -MYB83--------->ALFIN1                                         <-----------GT1 ===MYC_MYB    <---------ANAC58                            <---------YAB1 ---AtMYB61    <---------ANAC46              --------->ATHB12 <---------YAB1 ---TOE1(2)--------->At4g35610          <---------YAB1   ----------->GT1 ---------ANAC58                    ------>ZmHOX2a(2)--------->ARR14(2)            <---------ANAC58 ---TOE2(2)<---------ZAT14         <---------At4g35610--------->CCA1(2)            <---------ANAC58 --MYB52(1)<---------At4g35610    <---------ARR11(3) <---------ARR14(2)        <---------MYB46(3)   ttgtgtgaggtgctgcagcgtgatgtttcagacattgatctcaccattgatttgggatatggttattatctgcctgaagagttgttcgtgagtgagacac  685100                                               <---------At4g35610                                         <---------ANAC58                                         ----------->RAV1(2)                                         <---------ANAC46                                        <------NtERF2                                      <---------RAP2.6(2)                             <---------ICU4    --------->At4g35610                           <---------YAB1<---------ANAC58                         <---------AHL20(2)    --------->ZAT2                        --------->AHL20(2) --------->ALFIN1                    <---------ZAT18 <------MYB83                    <-------TEIL    <------MYB46(1)                --------->DAG2     <---------MYB46(3)                      ---------->DOF2               ---------->DOF2    <---------WOX13(1)          ------>ZmHOX2a(1)            <---------AHL20(2)  --------->ATHB12 ----------->HVH21   <---------ATHB12         -------            --------->AHL20(2) <---------YAB1  <---------ZAT2<---------ANAC58             <---------At5g28300  --------->WOX13(1)--------->ZAT18<---------AtMYB61         <---------ANAC58    <----------DOF2-----   tagtcaatctgaaattaaaaagtgcatttaatattgattggtggcctggagctgaaggcacttccttaccaatgcttaaaagtctttgtgtttacggtgt  685200  Previous    Next  AGI:  At3g03040.1    Description:  F-box family protein. Identical to Putative F-box protein At3g03040 [Arabidopsis Thaliana] (GB:Q9LDJ9); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G03030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63569.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 684692    to: 686284    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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