Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->MYB52(2)                      <---------MYB52(1)                    <---------------AGL15                                                  --------->YAB1                    --------------->AGL15                                                  ----------                   <---------YAB1                                                         <---------YAB1             --------->ARR11(3)                                                     <-----------GT1             <---------ARR11(3)          <---------ANAC58                       <---------AHL20(1)            --------->YAB1               <---------ANAC46                       --------->AHL20(1)           <---------YAB1         --------->AHL20(2)   --------->ARR11(3)       --------->AHL20(2)       <---------ANAC55(2)        <---------AHL20(2)   <---------ARR11(3)      <---------AHL20(2)  <---------ICU4 <-----------GT1 <---------AHL20(2)   <---------CCA1(2)    --------->AHL20(2) ------- ---------->RAV1(1)----------------->AGL1<---------ANAC58                  <---------AHL20(2) <------   tacaacattacatatgatattaccattagttgtaatttatatagcttatatgatatatatctatttctgaaaactatataaatattttacatatgataaa  676800                  --------->ARR11(3)       --------->ARR11(3)                                                                         ---       <---------ARR11(3)            --------->CCA1(2)                                         <-----      <---------RVE1(1)            <------ZmHOX2a(1)                                           ------      --------->GLK1(1)      ---------->DOF2                                                  -------     --------->ARR11(3)  <----------DOF2       --------->YAB1                                <-------     <---------ARR11(3) <---------ANAC58    --------->TOE2(3) ----------->GT1          <---------ARR11(3) ->GT1<---------GLK1(1) <---------ANAC58  ------->TEIL --------->ANAC55(2)             --------->AHL20(2) -->AHL20(2)      <---------ARR11(3)--------->ARR14(2) <---------ANAC55(2)             --------->AHL20(1) ---AHL20(2)      --------->AHL20(1)<---------ARR14(2) ----------->GT1        ---------->DOF2<-------   tttcacagatatctcatggatatattgctttaaaagaggatatgaacattaataaacatgtaatttgttaaaagaattgataaagaccatatattaagga  676900                                                    ------->TEIL                                   <-                                                 <---------ANAC55(2)                          <------                                                <---------TOE2(3)                             -------   ----------->GT1                         <---------ARR11(3)                                 <------ ------>AHL20(2)                           <---------AHL20(1)                                 ------- -ZmHOX2a(1)                         --------->ANAC58               ----------------->AGL3    ------- --->YAB1                            --------->AtLEC2       <---------ALFIN1             ----------->GT1 ---->GT1                            --------->ANAC58       --------->ZAT6        --------->MYB46(3) --TOE1(3)                       --------->AtLEC2<---------ANAC46   <-------TEIL--------->MYB52(1) <- --TOE2(3)   ---------->DOF2  <-------TEIL --------->AHL20(1) <<<<<<<<<TAC1  <---------At4g35610   --   taaaatagttactctgaaagaaaatttgaacattcatgcatgcaatatataacgtatgtcgaacactcgattcatatatagctaacaaatgtcgaaaata  677000     <----------DOF2                                                               --------->LBD16 --------ARR11(3)                                                                  ----------->GT1 ---ARR11(3)                                                                      <---------ANAC46 -->ICU4--------->AHL20(2)                        --------->ARR11(3)             <---------LBD16 ---AHL20(1)                                     <---------GLK1(1)             --------->ARR14(2) -->ARR11(3)                                     --------->GLK1(1)             <---------ARR14(2) -->AHL20(1)                                  --------->ANAC58           --------->ANAC46   <-------- ----------GT1                                --------->ANAC58       <---------HSFB2a(2)   --------->MYB52(1) ------->ARR11(3)   ---------->DOF2<-----------GT1<---------ARR11(3) --------->HSFB2a(2)   <---------   ttatcttctttaaaatacgaatcaaagctataacatttttctattgtcaagaaatcttttggcatccatttctacaaaccagttccggtgaattaacgct  677100                                            <--------ATHB1                                            >>>>>>>>>>AGL22                                            --------->YAB1                                            -------->ATHB1                                            >>>>>>>>>>AGL24          <---------AHL20(2)                                            >>>>>>>>>>AGL20          --------->AHL20(2)                                            <------------ATHB5      --------->AHL20(2)                                            --------->ATHB51    --------->AHL20(2)                                <---------WRKY18(1)         <---------ICU4                               ----------->HVH21        <---------AHL20(2)                               --------->WRKY12         --------->AHL20(2)                               --------->WRKY45        --------->AHL20(2)                            --------->TOE2(3) <---------WOX13(1)<---------AHL20(2)                        --------->MYB46(3)  --------->ATHB12<--------ATHB1     <---------ANAC55(2)                        XXXXXXXXXXXXXXXXXXXX>MIR839    <---------ATHB12        <---------ANAC58                      ------>MYB46(1)       <---------ICU4  <---------AHL20(2) <---------ANAC46     -                      ------>MYB83         <---------ATHB12 --------->AHL20(2) --------->ANAC55(2)  <                    --------->DEAR3(1)     <---------ATHB51 --------->ATHB51   <---------ANAC58    --                    <---------MYB46(2)     --------->ICU4--------->YAB1  <---------AHL20(1)     <----                    --------->MYB46(3)   <---------------AGL15 <---------AHL20(2)               -----                 <---------ALFIN1<---------At5g28300 --------->WOX13(1)  <---------AHL20(2)     <----  --------->ANAC58  <---------MYB55(2)  <-----------------AGL3 --------->AHL20(2)               -----  --------->ANAC58 --------->ANAC46     ------------>ATHB5 --------->ICU4--------->AHL20(2)    <----- -TOE2(3)       --------->MYB46(3)     ----------------->AGL3  <---------AHL20(1)          ---------- --GT1        --------->ANAC46 --------->WRKY38(1) ------------>CBF <---------AHL20(2)  --------->AtLEC2   tagcacgactgttttccctccaccgaacaacctttgaccgttccaataattggttcaattaataatttaatttaaaaaatttcgtattccatccacaatc  677200         <---------AHL20(2)    <---------AHL20(2)    <---------YAB1 -------->AHL20(2)  <---------AHL20(2) ---------AHL20(2) <---------AHL20(1)                                                               - ------->AHL20(2)  --------->AHL20(1)                                                            <--- -----ICU4         <---------AHL20(2)                        <----------DOF2                 <------- ---->ATHB12       --------->AHL20(2)                     <---------ARR11(3)              <---------ANAC58 ----HAHB4    --------->AHL20(2)                          --------->ARR11(3)              <---------ANAC55(2) ---->YAB1    <---------AHL20(2)               *TSS   --------->YAB1                      <---------ANAC58 ----ATHB12   --------->AHL20(1)              --------->YAB1<---------ICU4                --------->ANAC55(2) -->CBF  --------->AHL20(2)                --------->YAB1 --------->GLK1(2)            <---------MYB52(1)   atttatttgatttaaataaaataaaatttttattctcttgctcattaataagaaaatcaaaatctttactcgtttgaaatttgtaatccattacctgtca  677300                                                                                               ------                                                                                               ------                                                                                               <-----    <---------ANAC58                                                                    <---------HSFB2a(2)    <---------ANAC58               ----------->GT1                                      --------->HSFB2a(2) --------->WRKY12                  <----------ID1                                     <-------TEIL -- --------->WRKY38(1)             ---------->DOF2                                     --------->CCA1(2) --------->WRKY45           <---------------AGL15                          --------->YAB1      <----- -------->DOF5.7(2)         --------------->AGL15                ----------->HVH21  --------->ARR14(2) ------YAB1                --------->ZAT6                      <---------ANAC58     <---------GLK1(2) ----HVH21             <---------ATHB12   <-----------RAV1(1)  <---------ANAC58     <---------ARR14(2)   tcgttgacttgtcaagaagaaacaaatcaactctaaaaagaaaaatgttgttcatcgaaatcgaagcttgacagtattcaaaatcagattcgagatgagc  677400                     --------->RAP2.3(1)                     <------NtERF2                    <---------ATERF1(1)                    ------>NtERF2                   <---------ATERF1(2)                   <---------DEAR3(1)                   --------->RAP2.3(3)                   --------->RAP2.3(2)                   --------->ATERF1(2)                   --------->DEAR3(1)                  --------->DEAR4(2)                  --------->ERF1                  --------->RAP2.3(1)                  --------->ATERF1(1)                  --------->RRTF1(1)                  --------->ORA47(2)                  --------->DEAR3(2)                  --------->RAP2.6(1)                  <---------LBD16                 <---------ATERF1(1)                        --------->ARR14(2)                 ------>NtERF2                              <---------ARR14(2)                 <---------ERF1                             --------->ARR11(3)                 <---------RAP2.6(1)                    --------->LBD16                 --------->ABI4(2)                     --------->LBD16                 <---------RAP2.3(1)                  --------->HSFB2a(2)                 <---------DEAR4(2)                   <---------LBD16                 <---------RRTF1(1)                   <---------HSFB2a(2)                <---------DEAR3(1)                    <---------ANAC46               --------->ATERF1(1)                <---------GLK1(1)               --------->RRTF1(1)                 <---------ZAT2               --------->ERF1                     --------->ZAT2               --------->RAP2.3(1)                --------->GLK1(1)               --------->RAP2.6(1)                --------->At4g35610       <------NtERF2--------->LBD16              <---------ARR14(2)      --------->ANAC58                      --------->MYB52(1)            ----------->HVH21      --------->ANAC58   <-----------ARR10<---------MYB52(2)<---------ARR11(3)  <---------ANAC46<------NtERF2        --------->MYB46(3) ----------->ARR10 --->At4g35610<---------DEAR4(2)   <---------MYB52(2)<---------LBD16      --------->WRKY38(1) --->ZAT2   --------->DEAR3(2)  <---------DEAR3(1)<---------At4g35610     --------->WRKY12 ----ZAT2  --------->MYB52(1)   <----------ID1   ----------->ARR10    --------->ATHB12 --------->HVH21--------->DEAR3(1)<------NtERF2  --------->ARR14(2)  <------ZmHOX2a(2)             <- ----At4g35610<---------ATERF1(1)------>NtERF2   <-----------ARR10   <---------ATHB12            ----   tgcgacggaggcaaaccggcgccggcgaaactaggcgacgaacaactagcggagctccgggagatattccgatcatttgaccagaacaaggatggaagtt  677500                                                                                      ------>ZmHOX2a(2)                                        ---------->DOF2                              <------ZmHOX2a(2)             --------->MYB59  ------>ZmHOX2a(2)                                     --------->ARR14(2)    --------->ZAT2           <------ZmHOX2a(2)                                      <---------ARR14(2)    <---------ZAT2           <---------GLK1(1)               --------->ANAC46---------->DOF2    --------->GLK1(1)        --------->GLK1(1)            ------>MYB46(1)  --------->LBD16    --------->At4g35610     --------->ARR11(3)            ------>MYB83    <---------HSFB2a(2)     --- --------LBD16              <---------ARR11(3)            -------->P      --------->HSFB2a(2)  ------ ------->HVH21              <---------AGP1              --------->AtMYB61------>ZmHOX2a(2)  ---------   tgacggagctcgagttaggctcacttctaagatctctcggtctaaagccgagtcaagaccaactcgacacattgatccagaaagcagatcggaataacaa  677600                                                  =====================================bZIP_DOF                                                  --------->O2                                                  --------->ANAC55(2)                                                  <---------TGA1a                                                  <---------ANAC55(2)                                                  <---------O2                                               --------->WRKY18(1)                                           =====================HOX2a_HOX2a                                           ------>ZmHOX2a(2)                                          --------->CCA1(2)                                         --------->AGP1                                         <---------AGP1                                         <---------ARR14(2)                                         --------->ARR14(3)                                         <-----------ARR10                                         <---------ARR14(3)                                         --------->ARR11(3)                                         --------->ARR14(2)   --------->ANAC58                                         <---------ARR11(3)   --------->ANAC55(1)                                     ----------------->AGL1   --------->ANAC58                           --------->DEAR3(1) <-----------HVH21         <---------At4g35610        --                          <------NtERF2 <---------CCA1(2)     --------->ANAC46                    <--                         ------>NtERF2 ----------->ARR10 ------>ZmHOX2a(1)                       <---                        --------->DEAR3(1)<------ZmHOX2a(2)  <---------LBD16                    ----- ---->GAMYB            --------->ATERF1(1)======================HOX2a_HOX2a          <----------DOF2 --->MYB52(1)          ---------->ID1<-----------------AGL2<---------REM1(2)---------->DOF2     ----- >YAB1          --------->LBD16<-----------HVH21<---------WRKY38(1)     --------->At4g35610  --------   cggactggtcgagttctccgagttcgtcgccctcgtcgagccagatctggtcaagtgtccttacacggatgatcagcttaaagccatctttagaatgttt  677700  Previous    Next  AGI:  At3g03000.1    Description:  calmodulin, putative. Identical to Calmodulin-like protein 18 (CAM15) [Arabidopsis Thaliana] (GB:Q9M8U1); similar to calmodulin, putative [Arabidopsis thaliana] (TAIR:AT1G32250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62172.1); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 677247    to: 678091    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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