Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   ------>ZmHOX2a(2)                                         <---------YAB1  --------->ANAC58              --------->ATHB12                                     <----------DOF2     --------->ANAC58             --------->ICU4                                     <---------DAG2--------->At4g35610                <---------YAB1                                <-----------GT1 --------->At4g35610             <---------AHL20(2)                           <---------ANAC46    --------->ARR11(3)              --------->AHL20(2)  --    <----------DOF2        <---------ANAC55(2) <---------ARR11(3) ---------->DOF2   --------->MYB52(1) ------->RAV1(2)           ----------->GT1  <---------KAN4(2)  ----------------->AGL2<---------TOE2(3)   cctggcctttgtgttcaacatgtttagtctcgtaaaaccctttacgaatgatctgcagaacgcaaaccaaaaggagccagattaaataacgattagccaa  629500                                                                    --------->At4g35610                                                                    <---------At4g35610                                                                    <------NtERF2                                                                 <---------ATERF1(1)                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                                                 <---------At4g35610                                                                 --------->At4g35610                                                                <---------ATERF1(1)                                                                <---------RAP2.3(1)                                                                <---------ERF1                                                                ------>NtERF2                                                               <---------DEAR3(1)                                                               <---------ANAC46                                                               --------->ATERF1(2)                                                               <---------RAP2.6(2)      --------->GLK1(2)                                                               <---------RAP2.3(2)      --------->ARR14(2)                                                               <---------ATERF1(2)      <-----------ARR10                                                     <------NtERF2 --------->RAP2.6(2)  <---------ARR14(2)      --------->YAB1                              <---------At4g35610          --------->ARR11(3)     <------ZmHOX2a(2)       --------->CCA1(2)    --------->At4g35610          --------->AGP1 <------   --------->WOX13(1)<------ZmHOX2a(2)     <---------DAG2      <---------RAP2.3(3)     <---------GLK1(2) ------->RVE1(1)   --------->GLK1(1)       <----------DOF2    --------->RAP2.6(3)------>ZmHOX2a(2)  <   aatatcgatcaaaactcaaggagatcgaaagatagacctgtccagcttttttagcggcatcaatggcggcagccaaaaactgatctagagaatctgcgtc  629600             ---------->DOF2           --------->ANAC46                                                      ------>NtERF2           --------->ANAC58                                                      --------->LBD16         <------NtERF2                                                           <------NtERF2        ------>NtERF2                                                           --------->ANAC58       <---------ETT(2)                                                 <---------YAB1       --------->ETT(2)                                               <-----------GT1     <-----------HVH21                --------->AHL20(2)            <----------DOF2       <---------HSFB2a(2)    <-----------RAV1(1)  <------ZmHOX2a(1)  <---------TOE1(3)       <---------DAG2        --------->HSFB2a(2) -----HVH21--------->ANAC58        --------->GLK1(1)     <---------WOX13(1)     --------->ANAC46 ---------ATHB12       <---------TOE2(3)    <---------TOE2(3) ------>ZmHOX2a(2) --------->ANAC58   <-   aaatcaatgtcgcccgaaagaaaatgaggaaacagggaaatcaaataaggtttgcagagattgatcgtgactttaccattgtccgccattttcgagagaa  629700                                                                                     <---------ARR14(2)                                                                                     --------->KAN4(2)                                                                                    <---------KAN4(1)                                                                                    <----------TaMYB80                                                                      --------->MYB46(2)                                                                    <---------MYB52(1)         <-----                                                                   <-------GAMYB    --------->HSFB2a(1)                                                        <---------TOE1(3)           <---------HSFB2a(1)                                                        <---------TOE2(3)          ---------->TaMYB80                       <----------DOF2                 <---------At5g28300         <---------KAN4(2)              <----------DOF2                         --------->MYB52(1)           --------->ARR14(2)             <---------ANAC58                         <-----------GT1 --------->MYB59--------->ARR14(2)  ---------->DOF2 <----------DOF2                ---------->DOF2  <---------MYB46(3)--------->KAN4(1) ---------ID1<---------ANAC58                >>>>>>>>>MYB2       <---------TOE2(3) <---------ARR14(2)   gacgaaaagagtgatgctttctttactttgggatgtgtttcagagaaaaccaaaagttacggtttttgtggttaggcacagagcgaatattcgaggcatc  629800                         <---------MYB59                         --------------->AGL15                         <---------------AGL15                        ----------------->AG                        <-----------------AGL2                        ----------------->AGL2                        <-----------------AG                 ----------------->AGL1                        ----------------->AGL1               <-----------------AGL1                        <-----------------AGL1      *TSS     --------->SPL7                      <-----------GT1               --------->YAB1                   <---------ICU4                   <---------ICU4                  --------->AHL20(2)               --------->ICU4                 <---------AHL20(2)                <---------ATHB12                             <----                --------->YAB1                 --------->MYB46(3)   ----------->GT1        --------->ARR14(2)               <---------YAB1  --------->MYB59--------->ANAC58   --------->CCA1(2)         --------->GLK1(2)              <---------AHL20(1)              --------->ANAC46  --------->ARR14(2)         ----------              <---------AHL20(2)            <-----------GT1<---------SPL7                  <---------ARR14(2)              --------->AHL20(1)       --------->LBD16     <-----------HVH21              <---------GLK1(1)             --------->YAB1  <---------ATHB12 --------->ANAC58  <---------ARR14(2)<---------GLK1(1) --------->TOE2(3)<---------AHL20(2)  --------->ANAC46  <---------At5g28300       --------->GLK1(1) ----At4g35610--------->AHL20(2)    --------->At4g35610<-----------GT1          <------ZmHOX2a(1)   taatcttatactgtattatattaattacccaattaggcatccgaaatcacccaataatcacggtccgatatgggaaataagaggatttcagaaaatccgt  629900                  --------->ARR11(3)                  <---------ARR11(3)                 --------->YAB1                    <---------YAB1            ------------>CBF                     <-----------GT1            --------->MYB46(3)                  <---------AHL20(2)                        <---------ICU4          --------->MYB52(1)                   --------->AHL20(2)             --------->LBD16     --------->DAG2 --------->ATHB12      ------------>CBF                   --------->ANAC46    ---------->DOF2<---------YAB1        --------->TOE2(3)                   --------->ANAC58 -----MYB52(1)  --------->ICU4        <-----------GT1                        --------->ANAC58 -->MYB.PH3(1)  <---------ATHB12   <---------GLK1(1)        <----------DOF2 <---------LBD16       <--   tatacaaaaagctaaccaatgatcatttgaagattagatttcacctcaattttatcatccaactttctcttgacaaaacccgcattctgtaatcagttct  630000               --------->ARR14(2)            --------->DEAR3(2)                                                    <----------DOF2         ----------->HVH21                                                    --------->GLK1(1)         <---------SPL7                                                     <------NtERF2        --------->ETT(1)                                       <---------YAB1 <---------GLK1(1)      <-----------HVH21                                       <-----------------AGL2    --------->LBD16                                      ------>ZmHOX2a(1) --------->LBD16   <---------ANAC58                               <---------ZAT18          <------NtERF2  <---------HSFB2a(2)   <---------ANAC58                               --------->ZAT14          <---------RAP2.6(3)      <  <---------LBD16      <---------ANAC46           <---------ZAT14         --------->RAP2.6(2)       - --------DOF2  <---------ARR14(2)                 --------->ZAT18        <---------LBD16  --------->HSFB2a(2)   cttttccgggtcggacagacccgagtcgggtttggacttgagactattggactggactccttattctgaatatgggccggaattctttttttttagaaca  630100                                                        --------->ARR11(3)                                                        <---------ARR11(3)                                                <------NtERF2                                                <---------LBD16                                                --------->ATERF1(1)                                               ------>NtERF2                                              --------->TCP20                                              <---------PCF2                     <---------ARR11(3)       --------->TCP15(1)        --------->ANAC55(1)                <-----------RAV1(1)        --------->ANAC58             <---------YAB1    --------->YAB1                 <------MYB46(1)        --------->ANAC58            <-----------------AGL3                          <---------ANAC46        <---------ANAC55(2)    --------->AHL20(2)  <------NtERF2                    <---------ANAC58        --------->ANAC46       <---------AHL20(2) --------->LBD16          <----------DOF2        --------->ANAC55(2)    --------->AHL20(1) <---------RAP2.6(3)    ---------->ID1  <---------ZAT18       <---------LBD16         <---------AHL20(1)--------->RAP2.6(2) <---------ANAC58 <---------MYB46(3) -------TEIL         --------->ARR11(3)    --------->ALFIN1          <---------ANAC58 <------MYB83 -------->ZAT18  ---------->DOF2<---------AHL20(2)<------NtERF2 <-------TEIL        <---------ANAC58-   agtgcataacacggaaggaaaaagatgttctaatttattctgaatatggggccggaatgatattggtgcatacttgtctttctctggctggttcacttac  630200                                                                                          --------->ANAC58                                                                                          -----------                                                                                          --------->ANAC58                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                        --------->At4g35610                                                                        <---------At4g35610                                                         <---------HSFB2a(1)      <---------ANAC58                                                         --------->KAN4(1)     <---------MYB52(1)            <---------------------WRI1                   --------->MYB46(3)   <---------RAP2.6(3)    ----------->GT1               <---------MYB52(1)    <---------KAN4(2)     <-------GAMYB -------->YAB1         <----------DOF2            ---------->DOF2 <---------At4g35610--------->ZAT18   attgatgagaaaaatgcgaagaacactttgaaatcggtttgtgatcaagagacaaaggaacaatcgtctactgcttctgccgttgtgtggacaagaaaaa  630300                                         <-----------GT1                                   <---------MYB52(1)                             <----------DOF2                               <-----------GT1                          --------->ZAT6                        <---------AHL20(2)        ---------->ID1      <-----------GT1 >GT1            <-----------RAV1(1)<---------RVE1(1)           <---------YAB1 XXXXXXXXXXXXXXXXXXXX>MIR824   ctcattcaacaccaaaattatgttgttttatttttccgatattttacattttgtcttataaatctcatgatataacagtagcccctttctgagaagagat  630400  Previous    Next  AGI:  At3g02870.1    Description:  VTC4; 3'(2'),5'-bisphosphate nucleotidase/ L-galactose-1-phosphate phosphatase/ inositol or phosphatidylinositol phosphatase. similar to inositol monophosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G31190.1); similar to unknown [Populus trichocarpa] (GB:ABK96128.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760) Range:  from: 627519    to: 629852    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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