Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC46                                                                                           --------->HSFB2a(2)                                                                                          --------->LBD16                                                                                      --------->ARR14(2)                                       ------>MYB83                                   <---------ARR14(2)                                       ------>MYB46(1)                          --------->ANAC58       --------->ANAC46              --------->TOE1(2)                          --------->ANAC58 ->ANAC58           <------MYB83     <---------MYB59                       <---------At4g35610 ->ANAC46           <------MYB46(1)------->TEIL---------->DOF2             --------->At4g35610    --- ->ANAC58<---------REM1(2)     --------------->AtSPL8                 --------->MYB46(3)  <---------LBD16   attgcaaactcgacacacaggctggtctgattcgttgtacctacaaatccaaagaacaaactcttcatcccaactacagctcaagcccaatccccagaac  627000                                                                          ------>MYB46(1)                                                                          ------>MYB83                                                                          --------->MYB52(1)                                                                         --------->MYB55(1)                                                                        <---------MYB46(2)                                                                        <---------MYB59       -------                                                                        <---------MYB52(2)   <-------                                                                        <---------MYB111(1)  <-------                                                              --------->MYB52(1)             <-------                                                             --------->MYB46(3)       <-----------ARR10                                                           --------->MYB52(1)         --------->GLK1(2)              ----------->GT1    <---------bZIP60(1)    --------->At4g35610       <------ZmHOX2a(1) -------->RAV1(1)             ----------->HVH21    >>>>>>>>>TBF1       --------->ANAC55(2)  <--------   ccacaaatatttggaattgtagaaacccagaagtgacatcgaaacgaagagaagaagaagctaacaacggtttacctaacgagaggagaatctatgcggg  627100                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                                                                   --------->ANAC58                                                                                   --------->ANAC46                                                                                   --------->ANAC55(1)                                                                                   --------->ANAC58                                                                                ------->GAMYB       < <----------DOF2         <---------LBD16                                       --------->DEAR3(2)   - -->LBD16        <---------ANAC46                                              --------->MYB46(3)  <- --ANAC58    <-------GAMYB --------->LBD16                --------->WOX13(1)  --------->ANAC58   ---- --ANAC58   <---------ANAC58                    <---------ANAC58              -------->P ------->GAMYB --ANAC46   <---------ANAC58                    <---------ANAC58     ------>ZmHOX2a(1) --------->GLK1(1) -LBD16     <---------ANAC46              <<<<<<<<<TBF1  --------->MYB46(3)   --------->ANAC58   <---   tgtctttcttcttggcgttgagtttagaccggaacatggccttcttcttcgcttgagcatccatcactctccttcgtagcaacccacgcaactcccaaat  627200                          ------>ZmHOX2a(2)                         --------->CCA1(2)                         <------ZmHOX2a(2)                        <---------AGP1                        --------->ARR11(3)                        <---------ARR14(3)        --------->ANAC46<---------ARR11(3)        --------->ANAC58--------->ARR14(2)                                         <---------At5g28300        --------->ANAC58<---------ARR14(2)                                      <-----------HVH21 -----------GT1         --------->GLK1(2)                                      ------->GAMYB -------->YAB1          --------->ARR14(3)                                  ----------->RAV1(1) --------YAB1         ----------->ARR10                                  <------ZmHOX2a(1)    ------- ----->YAB1 --------->ANAC58                     <---------ATHB12     <------ZmHOX2a(1)     --------- ------ICU4 --------->ANAC58          ---------->ID1            ------>ZmHOX2a(1) <---------WRKY38(1)   tatcacaacctcgcaaggaatacgaagatctgagaaatttgttctattcaaatcaaaccctaagtccttagaggaggacaacagtcaccgtgagaatcaa  627300                                                                                          --------->HSFB2a(2)                                                                                          <---------HSFB2a(2)                                                                                        ----------->RAV1(2)                                                                                      <---------ANAC58                                            <---------MYB46(3)                        <---------ANAC58                                            <---------DEAR3(2)                       --------->HSFC1(2)                                           --------->ETT(1)                          <---------HSFB2a(1)                                         <-----------HVH21                           --------->HSFB2a(1)                   --------->ANAC58   --------->ANAC55(2)                            <---------HSFC1(2)                   --------->ANAC46   <---------ANAC58                          --------->HSFB2a(2)                   --------->ANAC58   <---------ANAC58                          <---------HSFB2a(2)--   ------>ZmHOX2a(1)--------->LBD16  <---------LBD16      <---------LBD16      <---------LBD16   <--- -->YAB1          <---------LBD16   <-----------GT1<------ZmHOX2a(2)        <----------DOF2     <---- >GLK1(2)  <---------MYB52(1)    <----------DOF2  <---------ARR14(2)     *TSS <---------LBD16  <-----   aattcctccctccgttcttctccgcaatctcttctcttttacgggtcgggtcgatccaactcgggattagacttgagactttcgggatgcttctgggtcg  627400                                                                                  <----------DOF2              <---------SPL7                                                     <---------DAG2     <---------ARR14(2)                  <---------MYB46(3)          --------->TOE1(3)     --------->ARR14(2)                  ----------->GT1             --------->TOE2(3) ------->MYB52(2)                      <-------GAMYB              --------->CCA1(1) ------MYB52(1)       <---------ICU4  <-----------RAV1(1)         --------->RVE1(1)  --------->YAB1 ---GAMYB     <------NtERF2         ------>ZmHOX2a(1)     <------ZmHOX2a(2)--------->ANAC46 ----MYB46(3)--------->RAP2.6(2)    =============================HOX2a_HOX2a  <---------ALFIN1    ---   ttagtcgtaactgggccggactcattatccccattttcctctgttgttaatttagtatggatcacaaaataccttaaactccaccttttataaaaaaaaa  627500                                                                    <---------YAB1                                                                 --------->TOE2(2)                                                              ------>MYB46(1)                                                              ------>MYB83                                                            <---------MYB59                      <------ZmHOX2a(2)            --------->WOX13(1)    <---------AHL20(2) ---------                     --------->ARR11(3)          <---------YAB1  --------->TOE1(2)<---------WOX13(1)<                     <---------ARR11(3)      --------->YAB1 <---------MYB46(2) <---------YAB1       - ------>AHL20(2) ---------->DOF2             --------->AHL20(2) --------->YAB1 <---------AHL20(2) <--   aaaaatgcaaactcgattacaaagatcaactacatggaagaacagaattatatcattcaataccaaacatatgatttttttttaattgaattcacaaagg  627600      ----------->GT1                                                      <---------TOE2(3)    ---------->DOF2                                                       <---------ICU4 ->DOF2                                                                  <---------ATHB12 ---------At4g35610                                                      <---------ATHB51 -------->At4g35610      <-----------GT1                     ----------->GT1     <---------TOE2(3) ------P--------->AHL20(2)      --------->MYB46(3)         ---------->DOF2--------->YAB1   gtagcagaaagaaaatagttttttttttttctcaacaattgagtttgttttctttctaccgaaaagaaatattcaataatgttaagtttttgaattgagt  627700                                                                  --------->ANAC58                                                                  <---------ALFIN1                                                                  --------->DEAR3(1)                                                             --------->ANAC58                                                             --------->ANAC46                                                             --------->ANAC58                                                             --------->RAP2.3(2)                                           <---------bZIP60(1)    --------->ANAC58                                      --------->At4g35610    --------->RAP2.6(2)                                  --------->MYB52(1)       --------->At4g35610                               <---------ICU4           ---------->DOF2---------->CDC5                               --------->YAB1<xxxxxxxxxxxxxxxxsmallRNA(se3)        <---------TOE1(3)    --------->AHL20(2)        <-----------HVH21 <---------At4g35610        --------->DAG2 ----------->GT1<---------At4g35610 --------->ANAC46        <---------TOE2(3)   --------->YAB1 --------->bZIP60(1)--------->LBD16  <-----------GT1   ttgatcatataaggttgagaccatattgtaaaataataacagatgacttcatgcccctgtaagccgcaacgcctcagcgaataactccttgagagaagcg  627800                                               --------->At4g35610                                             ------>ZmHOX2a(2)                                            <------ZmHOX2a(2)                                            <---------At4g35610                                           --------->GLK1(2)                                           <---------ARR11(3)                                           <-----------ARR10                                           --------->ARR14(2)                                           <---------AGP1                                           <---------ARR14(2)                                          <---------ARR14(1)                                          <---------CCA1(2)                                         --------->LBD16                                       <---------LBD16                    ----------->GT1                                     <-----------GT1                      --------->MYB52(2)             ------>ZmHOX2a(1)     <----------DOF2                      <---------MYB52(1)          <------ZmHOX2a(2)       <---------ICU4                   ------------>MYB.PH3(1)         --------->ARR14(2)     <---------ARR14(2)          ----------->RAV1(1)      --------->At4g35610         <---------ARR14(2)     <-----------ARR10          --------->ANAC58     --------->YAB1       ----------->ARR10        --------->ARR14(2)         --------->ANAC46    <---------YAB1      --------->LBD16           <---------ARR11(3)         --------->ANAC58  --------->YAB1 <--------      ------>NtERF2             <---------ARR11(1)         <----------ID1 --------->MYB59 <---------ORA47(1)     --------->RAP2.6(2)       <---------CCA1(2)      ---------->DOF2  ------------>MYB.PH3(2)   tttgaagccgcgatcctctgcgatgttatgtccaaatctttaccggatctgatgaacaaagacgacataaaacagttagttataatcagttggacggttt  627900  Previous    Next  AGI:  At3g02860.1    Description:  zinc ion binding. similar to CTV.12 [Poncirus trifoliata] (GB:AAN62341.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880) Range:  from: 625170    to: 627373    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g02870.1    Description:  VTC4; 3'(2'),5'-bisphosphate nucleotidase/ L-galactose-1-phosphate phosphatase/ inositol or phosphatidylinositol phosphatase. similar to inositol monophosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G31190.1); similar to unknown [Populus trichocarpa] (GB:ABK96128.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760) Range:  from: 627519    to: 629852    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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