Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->TOE2(3)   -------->P   ------>MYB83   ------>MYB46(1)  --------->MYB55(1) <---------MYB46(2) <---------MYB111(1) --------->AtMYB61                       --------->YAB1                          ---------->DOF2 <---------MYB111(2)           --------->ZAT14                                  <---------AHL20(2) <---------MYB59               <---------ZAT14                              --------------->AGL15 ----ICU4                      <---------ZAT18                              <---------------AGL15 ---ATHB12                     --------->ZAT18     --------->AHL20(2)    ------->TEIL      <------ZmHOX2a(1) >WOX13(1)            ---------->DOF2 --------->YAB1                  <---------YAB1   ---------->DOF2   atacctaccctaaaatccatataacaaagtaagtggactagaataatacaaaataaaacataaggcctacttatgaaactattaaaagttaaaggactca  623200                                  <---------SPL7                                        --------->YAB1                                 <---------ANAC58                        --------->ARR11(3)      ----                         --------->GLK1(2)                               <---------ARR11(3)      <---                    <---------ANAC46        <---------------------WRI1  <---------RVE1(1)        <---                  --------->REM1(2) ------->TEIL                        --------->RVE1(1)      ------                 ----------->TGA1<---------REM1(1)                      <---------GLK1(1)    <-------                 ----------->HVH21<---------ZAT14                       --------->GLK1(1)    <-------               <---------ANAC58  <---------ANAC58                      --------->ARR11(3) -----------               <---------ANAC58 <---------------AtSPL8                 <---------ARR11(3) -----------           ---------->DOF2 <---------AHL20(2)<---------LBD16      --------->HSFB2a(2)   <---------ICU4   gaaaacaaaattcaaaagcgtgacgagaatttatggtgtaccggttatcgggatgaacaatggagcctctggagatatctctgattccattaatgacggt  623300                   <------NtERF2                  --------->LBD16                  ------>NtERF2                  <---------ATERF1(1)                 --------->ATERF1(2)                 <---------DEAR3(1)                 --------->RAP2.3(2)                 <---------ATERF1(2)                 --------->DEAR3(1)                --------->RAP2.3(1)                --------->ERF1     <---------ALFIN1 <----------DOF2--------->DEAR4(2) ----->ZAT14    <---------LBD16                                                                     - ------ZAT18    --------->ATERF1(1)                                                                 = ------ZAT14   ------>NtERF2                                                                        - --->At5g28300--------->DEAR3(1)                                                               ------ --DEAR3(1)   ------->GAMYB   --------->ZAT6                               <-----------GT1    ------- --ANAC46    --------->DEAR3(2)                                   ------>ZmHOX2a(1)    -------------- >HVH21      --------->MYB46(3)      --------->ARR11(3) ------->TEIL    --------->GLK1(2)     <------ >TGA1      <---------ATERF1(1)--------->TOE1(3)  <------ZmHOX2a(1)--------->ANAC46  <---------CCA1(2)   gaactttccaccgctaccgccggcgaagtctaaccctaagaaattggtgagaggattgaatctgtttcctcgcgattctacaatcccatctctgaaatca  623400                                                              <---------At4g35610                                                              ------>NtERF2                                                             --------->RRTF1(3)                                                             --------->RAP2.6(2)                                                             --------->RAP2.3(2)                                                             --------->DEAR3(1)                                                            --------->RRTF1(1)                                                            --------->RAP2.3(1)                                                            --------->ATERF1(1)                                                            <------NtERF2                                                           --------->ABI4(1)                                                           ------>NtERF2                                                           <---------ATERF1(1)                                                           <---------RAP2.3(1)                                      <---------At4g35610 --------->RAP2.3(3)                                      --------->At4g35610 --------->RAP2.6(2)                                     --------->DEAR3(1)   --------->RAP2.3(2)                                     --------->RAP2.6(2)  <---------DEAR3(1)                                    --------->ATERF1(1)   <---------ATERF1(2)                                    <------NtERF2         --------->ATERF1(2)                                    --------->RAP2.3(1)   --------->DEAR3(1)                                    --------->RRTF1(1)    --------->RRTF1(3)                                   <---------RAP2.3(1)    <---------ALFIN1                                   ------>NtERF2          --------->RRTF1(2)                                   --------->ABI4(1)      --------->ANAC46                                   <---------ATERF1(1)   --------->ATERF1(1)                                  --------->RAP2.3(2)    --------->RAP2.6(1)                                  <---------ATERF1(2)    --------->RRTF1(1)                                  --------->DEAR3(1)     --------->ORA47(2)                                  --------->ATERF1(2)    --------->DEAR4(2)                                  <---------DEAR3(1)     --------->RAP2.3(1)                                 --------->ORA47(2)      --------->ERF1                                 --------->ERF1         --------->LBD16                                 --------->RAP2.3(1)    <---------At4g35610                                 --------->ATERF1(1)    --------->ABI4(1)                                 --------->DEAR4(2)     --------->At4g35610                                <---------RAP2.3(1)    --------->ANAC46    --------->TOE1(1)       <---------GLK1(2)  --------->ANAC58    --------->TOE2(1) --------->O2--------->ANAC46 <---------HSFC1(2) ------->P            --------->TGA1a--------->RRTF1(3)--------->DEAR3(1)                   --------- ===============================MYC_MYB        --------->ANAC58                             --------- ------>TEIL          <---------TGA1a--------->RAP2.3(2)------>NtERF2                       <-------- --->YAB1             --------->bZIP60(2) <---------YAB1<---------ATERF1(1)                 --------- -->ICU4              --------->ANAC46------>NtERF2--------->HSFC1(2)             --------->DEAR3(1) ------->WRI1         <---------O2--------->RAP2.3(3) <---------LBD16   ------>MYB83      <---------- ---ATHB12  ------>ZmHOX2a(1)   <---------ATERF1(1)<---------HSFB2a(1)  ------>MYB46(1)   --------->YAB1   tcaacctcgtaatcctctaattccacgtctgattcgccgccgctacgataagaaactccgccgccgctactacctcccattacacctccgaatcacgata  623500                <---------TOE2(3)              ----------->HVH21    --------->GLK1(2) <---------GLK1(2) <---------ARR11(3) >ANAC58  <---------GLK1(1) >ANAC58  --------->GLK1(1)                                                      <---------DAG2 -YAB1    <---------RVE1(1)                      <----------DOF2 <----------DOF2 <----------DOF2 >ANAC46 --------->ARR14(2)               <-----------GT1        *TSS        <-----------GT1 -GT1    <---------ARR14(2)             <-----------GT1<----------DOF2    <------------------------ANAC81   ccagataatcggatatttgacgaagaagacaacctctctgtttttctctctctttctctttctctctctttctctcttatttcctttttgtgattttcag  623600                 ----------->RAV1(2)                 <------NtERF2                 --------->ATERF1(1)                <---------RAP2.3(1)                ------>NtERF2               <---------RAP2.3(2)               <---------RAP2.6(2)                      --------->AHL20(2)          <------------CBF                         ----------->GT1     <-----------------AGL3                      ----------->GT1      ----------->GT1            ----   ttatatgcctaaaattggcgcctgtgttttcaaatttcgaaacttatcagatagagaaaaaaatagcaactcaagttaattcgatgaacaacaccatgga  623700                                                  <---------AHL20(2)                                             <---------MYB52(1)                          <---------MYB52(1)<-------GAMYB   --------->TOE2(3)         --------->DAG2<             --------->ANAC46              <-----------RAV1(1)  ---------->DOF2      ---------->DOF2- ----->ARR14(2)      <-----------GT1     <---------ZAT18 <-----------GT1     <---------YAB1        --   atcggcgaaatttatacacaaattttcggtttttttttgttagtgctgttgtttattttttacattaaaagttcaaattgtgattcaaaaagcccatgct  623800         <---------YAB1        <---------AHL20(2)   <---------DOF5.7(2)     <---------AHL20(1)      --------->MYB52(1)     --------->AHL20(1)    --------->ARR11(3)   <---------TOE2(3)   ---------->DOF2            --------->AHL20(2)  --------->AHL20(2)  --------->AHL20(2)          --------->YAB1                    --------->CCA1(2)  --------->YAB1   --------->YAB1           --------->YAB1                         --------->ARR11(1)  <---------AHL20(2)  <---------AHL20(2)---------->DOF2                            <---------ARR14(2) ---------AHL20(2)<---------YAB1    ----------->GT1  <---------AHL20(1)          ----------->ARR10 -------->AHL20(2)--------->ICU4    <---------ZAT6<---------AHL20(2)--------->DAG2 --------->ARR11(3) ------->YAB1   --------->YAB1<---------TOE2(3)--------->YAB1       <---------TOE2(3)         <------   atattaatatttttatggtcataataaaagataacgtagtgtaaaagaataataatatgttttaaaaaataaggtgaaccagtgagatatgggtttattt  623900                                                                                    <-------TEIL                                                                                 <---------ANAC55(1)                                                                                 <---------ANAC55(2)                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 <---------ANAC46                                                                                 --------->ANAC55(2)                                                                             <-----------HVH21                                                                          <---------ANAC58          -                                                         --------->CCA1(2)<---------ANAC58          <                             --------->YAB1       ------->GAMYB           <---------ANAC55(2)       <                        --------->AHL20(2)       --------->MYB46(3)       <---------ANAC55(1) <------                        <---------AHL20(2)     <-----------GT1            <---------ANAC46    -------                  ----------->RAV1(1)       --------->YAB1           <---------ICU4 ------->TEIL    < ---YAB1        --------->ZAT18          <----------DOF2<---------ARR11(3)--------->ANAC55(2) <------   ttagaatgacctatgaagagcaccatataaatgataagagagtcttttataaccacaagataaacaataagtcattacgtgttacgtacatgtgataagg  624000     --------->bZIP60(1)     <---------bZIP60(1)     <---------ANAC46     ----------->GT1 -------->YAB1 ---------ANAC46     <------ZmHOX2a(1)    <---------AHL20(2) ---------ANAC58     =======================HOX2a_HOX2a ---TOE2(3)       <---------HSFB2a(2)     --------->AHL20(2) -->DAG2    --------->DAG2   <----------DOF2                                                  <------ ---------ANAC58  --------->HSFB2a(2)<------ZmHOX2a(2)         <----------DOF2         <----------DOF2 ---TOE1(3)---------->DOF2   <---------DAG2                <----------DOF2             <---------DAG2   tatcgtgatgtgataaagttcgaggaagtcactttttcgatcattttattcgtaaatgtttctttctttctaatgctaaacgatttctcctttatcacgt  624100  Previous    Next  AGI:  At3g02850.1    Description:  SKOR (stelar K+ outward rectifier); cyclic nucleotide binding / outward rectifier potassium channel. Identical to Potassium channel SKOR (SKOR) [Arabidopsis Thaliana] (GB:Q9M8S6;GB:O82630;GB:Q9SB86); similar to GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL), cyclic nucleotide binding / inward rectifier potassium channel/ outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT5G37500.1); similar to shaker-like potassium channel [Vitis vinifera] (GB:CAD35400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44721.1); similar to potassium channel TORK1 [Nicotiana tabacum] (GB:BAD81036.1); contains InterPro domain RmlC-lik Range:  from: 619685    to: 623565    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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