Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                   <-                                                                                                 <---                                                                                                 ----                          --------->GLK1(2)                                          <---------ICU4-- --------TOE2(3)         <---------GLK1(2)                                          <---------AHL20(2) --->TOE2(3)  --------->ANAC58                 --------->ANAC46          --------->AHL20(2)   ------- --->TOE1(3)  --------->ANAC58   <---------LBD16<------ZmHOX2a(1)   <---------YAB1  --------->AHL20(2) >DOF2        --------->ANAC46  ------>ZmHOX2a(1)        --------->MYB52(1)   --------->MYB52(1)<----   taatgttgttagcctcaagaaacttgagattctcctctgggtatggttcaggacacagataactgttttgatgaataaaaaaacgattaattactccaat  607500         <---------YAB1       --------->YAB1      --------->ICU4      <---------ATHB12                            <------ZmHOX2a(2)    --------->WOX13(1)                           <---------ARR14(2)                  <------ZmHOX2a(1)   --------->AHL20(2)                            <---------ARR11(3)                <---------TOE1(3) ---------ICU4                                   --------->ARR14(2)                <---------TOE2(3) --------YAB1                                    --------->ARR11(3)            <----------DOF2 ------ICU4                                     <------ZmHOX2a(1)          <---------TOE1(3) ----->YAB1            --------->AHL20(2)     <---------TOE2(3)        --------->CCA1(2) ------->ICU4       --------->ATHB51        ---------->DOF2           <---------ARR11(3) -->WOX13(1)       <---------YAB1        --------->YAB1--------->ANAC55(2) <---------TOE2(3) -----ATHB12   ----------->GT1  <-----------RAV1(2)------>ZmHOX2a(2)  --------->ARR11(3)   cataatcaattatcaaacagtataattgaataacccagaagattaataaaggatcttacatgatggaacgaagatttagggttttaaggaaactgaaatt  607600                                                             ------>NtERF2                                                           --------->ATERF1(1)                                                           --------->RAP2.3(1)                                                           <------NtERF2                                                          <---------RAP2.3(1)                                                          <---------ERF1                                                          <---------RRTF1(1)                                                          <---------DEAR4(2)                                                          <---------ORA47(2)                                                          <---------ATERF1(1)                                                          ------>NtERF2                                                          <---------RAP2.6(1)                                                         <---------RRTF1(3)                                                         <---------RRTF1(2)                                                         <---------RAP2.3(3)                                                         <---------RAP2.3(2)                                                         <---------DEAR3(1)                                                         --------->DEAR3(1)                                                        --------->ATERF1(1)                                                        <---------ABI4(1)                       --------->AHL20(2)              <---------RRTF1(1)                   ----------->GT1                     <---------RAP2.3(1)                  <------ZmHOX2a(2)                    <---------DEAR4(2)                 --------->ARR14(2)                    ------>NtERF2                 <---------ARR14(2)                    <---------ATERF1(1)                 --------->AGP1                        <---------ERF1          --------->GLK1(1)                           <---------RAP2.3(2)          <---------GLK1(1)                           <---------RAP2.3(3)         <---------ARR14(2)                <---------HSFB2a(2)         --------->ARR14(2)                --------->HSFB2a(2)                 <---------YAB1--------        =================HOX2a_HOX2a   ------->GAMYB  <---------DEAR3(1)    <---------MYB52(1)  -----        <------ZmHOX2a(1)             --------->MYB46(3)<------NtERF2      <-------GAMYB <---------MYB52(1)   ctcaggtcgaggaaacccagatcgataaattccatcttcaaccatcgagaaattcgacggcggcgctaaaacatcaccgttgtgatcatccgtttccata  607700                                                                                           --------->ARR11(3)                                                                                =====================                                                                                ------>ZmHOX2a(2)                                                                                =====================                                      --------->DAG2                           --------->At4g35610                                     ---------->DOF2                           <---------At4g35610                                  --------->YAB1             --------->LBD16  <---------AGP1                                ------------------------>ANAC81  --------->CCA1(2)         <---------ARR11(3) ->TOE2(3)                 ---------->DOF2             --------->ANAC58    <---------KAN4(2) ---->YAB1            --------->TOE2(3)                --------->ANAC58    <---------WOX13(1)    <---   atcaaacacatcgaattcagtaaacctctaaaagaatcaaaaagagagaaacagagcaagacccgagatttgatgggattgatctgagaagaagatgttt  607800                                                                                     ------>ZmHOX2a(1)                                                                                   <---------HSFB2a(1)                                                                                   ------>ZmHOX2a(2)                                                                                   --------->HSFB2a(1)                                                                                   --------->HSFC1(2)                                                            <---------GLK1(2)      <---------HSFC1(2)                                                            --------->ARR11(3)    <------ZmHOX2a(2)                                                            <---------ARR14(2)   --------->ARR11(3)                               --------->DAG2       --------->ZAT18              <---------ARR14(2)                              ---------->DOF2       --------->ZAT14              <---------ARR11(3)      ================HOX2a_HOX2a                   <---------ZAT18              --------->ARR14(2)      <------ZmHOX2a(1)<---------ANAC46            <---------ANAC58             <------ZmHOX2a(1)   ===================HOX2a_HOX2a                  <---------ANAC58            <------MYB46(1)   <------ZmHOX2a(1)--------->ALFIN1              <---------------AtSPL8       <------MYB83 ============HOX2a_HOX2a  <-------TEIL          --------->DAG2         <----------DOF2 =========HOX2a_HOX2a  ----------->GT1         ---------->DOF2       <---------At4g35610     *TSS  -- ------YAB1    <------ZmHOX2a(2)          <----------DOF2 ----------->ARR10  <--------P      <-------   ttataggaggagaagggatcaagtggggttcataaaggagacaactttgaaaagcgtactcagattttgggagcttttggtaggatccttccttcctttg  607900                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                        ---------->ID1                                                                     ------->MYC3                                                                     <-------MYC3                                                                     -------->ABF1                                                                     ------->MYC2                                                                     ------->MYC4                                                                     <-------MYC4                                                                     <-------MYC2                                                                    --------->O2                                                                    <---------O2                                                                    ============================bZIP_DOF                                                                    <---------TGA1a                                                                    --------->TGA1a                                                                    <---------ANAC55(2)                                                                    <--------ABF1                                                                <-----------HVH21                                                               ----------->HVH21                                                               ------>ZmHOX2a(1)                                                             ----------->RAV1(2)                                                             ------>ZmHOX2a(2)                                                           --------->ARR14(3)                                                           --------->AGP1<---------ANAC58                                                           <---------GLK1(2)                                                           <---------ARR14(3)               <---------------AGL15                       --------->ARR11(3)               --------------->AGL15                       <---------ARR11(3)               --------->TOE1(3)                <------ZmHOX2a(1)<<<<<<<GRF7              <-----------------AGL3         <---------LBD16<------ZmHOX2a(2)     <---------ANAC46                     --------->TGA1a  <---------ARR14(2)     <---------ANAC58                 <---------MYB59      --------->ARR14(2)     <---------ANAC58          <---------ANAC46 ====================HOX2a_HOX2a ------->ATHB12--------->TOE2(3) --------->ALFIN1<---------GLK1(2)  --------->ANAC55(2)      <------- ---DOF2      ----------------->AGL2------->TEIL===================HOX2a_HOX2a       <----------DOF2   ttgatttgcttagaaaaccttaaatggattttagggtggacctcacttcaggaatctccaagatcctgacacgtgtcgttttctctgcttttatttgacc  608000                    <-----------ARR10             <----------DOF2          --------->GLK1(2)                   --------->TOE2(3)     --------->MYB52(1)                      --------->YAB1    ----------->TGA1------->TEIL             <---------ICU4                                       ---    ----------->HVH21                       --------->ICU4         --------->AHL20(2)             <--  <---------At4g35610             --------->WOX13(1)               <---------AHL20(2)     <---------MYB46(3)  --------->At4g35610            <---------WRKY38(1)           <---------AHL20(2)    --------->ZAT14  --------->ZAT2    --------->GLK1(2)  ------>ZmHOX2a(1)       --------->AHL20(2)    <---------ZAT14< ----GT1 <---------GLK1(2)      --------->WRKY18(1)       <---------YAB1   --------->TOE2(3)     <---   tcatagctgacgattctttacgaatctaatttgggtcaatcctgtaaacattatctaattttgattaaaataaatattcttagaaagtatagtggtcgaa  608100         ----------->GT1        --------->DAG2                                                     --------->WRKY12       ---------->DOF2                                                     --------->WRKY38(1)  ---------->DOF2                                                        <-------GAMYB ------>YAB1                                                            <---------ANAC46 -------ICU4                            <---------YAB1                  <---------MYB46(3) ---------YAB1                 <---------AHL20(2)                  --------->O2 ------ATHB12                  --------->AHL20(2)                  <---------O2  ---------->DOF2-----   tcatgaaagaaaagtaaaactaagtggtctcatttaaaaattttgattccacagactgaaacttttgacaagtgtcgttgacaaaaagatggaaaacaca  608200                                                                               --------------->AGL15                                                                              ----------------->AGL1                                                                              ----------------->AGL2                                                                              ----------------->AGL3                                                 --------->WOX13(1)        --------->GLK1(1)                                               <<<<<<<<<GATA-1             <---------CCA1(2)                                   <---------ARR11(3)               --------->TOE2(3)               <---------------AGL15--------->CCA1(2)               <----------DOF2       ------>ZmHOX2a(1)           --------->ARR14(2)         --------->ARR11(3)      --------->TOE1(3)            <---------ARR14(2)         --------->ARR14(2)                <----      --------->TOE2(3)            --------->ARR11(3)         <-----------ARR10<---------------AGL15    <---------YAB1               ----------->ARR10            <---------ARR14(2)         --------->GLK1(2)   <---------ARR14(2)  <------ZmHOX2a(1)  <----------DOF2  --------->ANAC55(2)----------------->AG<-- ----->DOF2    ================================================================================MADS_MADS   aagactatccttaattgcaaaaataggataagaagtagatatgtcttttatctatcagtttaagtatctactttagtatatccaaattgagaatctaata  608300                                                               <---------ICU4                                                              --------->ICU4                                                          <---------WOX13(1)                        <---------ICU4                 <---------YAB1                       --------->ICU4                  <---------TOE2(3)                  ----------->GT1                  <---------At4g35610 --------->GLK1(2)           <---------YAB1                          <---------ZAT2   <---------YAB1         ------>ZmHOX2a(1)                         --------->ZAT2   <---------TOE2(3) -----ICU4 <---------ATHB12                        --------->At4g35610<---------GLK1(2) --------DOF2    <---------TOE2(3)           <-----------HVH21<---------YAB1   ctttccatttcctatgaataatgtaatatttgctcataggctatatgagtcacagctaagattgattattaagattcttatctagggtttgattatctca  608400  Previous    Next  AGI:  At3g02800.1    Description:  phosphoprotein phosphatase. similar to tyrosine specific protein phosphatase family protein [Arabidopsis thaliana] (TAIR:AT5G16480.1); similar to Tyrosine specific protein phosphatase and dual specificity protein phosphatase; Putative tyrosine phosphatase [Medicago truncatula] (GB:ABD28384.1); contains InterPro domain Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861) Range:  from: 606478    to: 607893    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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