Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------------AtSPL8                                                        ------->TEIL                                                   --------->YAB1                    --------------->AGL15          <---------ICU4                   <-----------------AGL2         <---------YAB1                   <-----------------AGL3         --------->ICU4                   ----------------->AGL2       --------->YAB1                   <-----------------AG      <---------CCA1(2)                  <---------At4g35610      <---------ANAC55(2)      --------->YAB1<---------------AGL15  --------->TOE1(1)           ------->TEIL --------->DAG2   --------->YAB1 ----------->GT1          --------->ANAC55(2)        <---------CCA1(2)        ------ >At4g35610       --------->At4g35610 --------->YAB1 <---------YAB1------->TEIL    ---------->DOF2   acaaataatcaaattgagacagctaaaattggaaattgaatcatctcgtatcatcatgaatgtacaatgtatgtatctctctgtaaaaagggaattacaa  582700                                                      --------->ICU4                                                  ------>NtERF2                                                 --------->bZIP60(1)                                                 <---------bZIP60(1)                                                 --------->ANAC58                                 ---                                                 --------->ANAC58                                <---                                                 --------->ANAC46                                ----                                              ----------->HVH21                               <------      --------->CCA1(2)                     <---------ANAC58                                  <------    --------->CCA1(2)     --------->REM1(2) <---------ANAC58          ----------->RAV1(2)     ------- ---->DOF2       <------ZmHOX2a(2)    <---------REM1(1)             ------>ZmHOX2a(2)   <---------LBD16   agagagagataagagtgagatcgaaccgtgatgagcgtaaatgtaggcttgacgccatgaatagatgtgatcgcctggtttcacatcgtctctggagatt  582800                               --------->MYB52(1)                              <---------SPL7                             <---------MYB52(2)                             --------->MYB46(3)                            <------NtERF2                           <------------------SPL14                          --------->At1g77200                          --------->DREB2C(2)                          --------->RAP2.3(3)                          --------->DEAR3(1)                         --------->ERF1                         --------->ORA47(2)                         --------->RAP2.3(1)                                --------->ARR14(2)                         --------->ATERF1(1)                                <---------ARR14(2)          --------->GLK1(1)------>NtERF2                                    <---------ARR11(3)         <---------GLK1(1)----------->HVH21                                 --------->ARR14(3)      --------->ANAC58   --------->DEAR3(2)                  <-----------TGA1<------ZmHOX2a(2)      --------->ANAC58  --------->At4g35610                  <-----------HVH21------>ZmHOX2a(2)    ---------->DOF2     --------->LBD16                     --------->O2    <---------AGP1 ------>ATHB12          ------>NtERF2                       --------->bZIP60(1)                  ---- ------AHL20(2)         <---------At4g35610                 <---------bZIP60(1)          <---------ANAC58 ----->AHL20(2)         <---------ATERF1(1)              <---------ANAC58   <-----------ARR10    <--- -----------AGL3       --------->DEAR3(1)                <---------ANAC58   <---------ARR14(3)  ----- ---ARR11(3)           --------->ANAC46                  <---------ANAC46   --------->ARR11(3)<------ -->ARR11(3)          <---------LBD16             <---------TOE2(3)     ---------->DOF2  <---------ANAC58   ttattggaaaggaatcccatcttctccgccgacgaacggagaaccagaaattagggattgcgtcgtcagagagagaaagatcttattttttgcttagtgt  582900                                                              <----------DOF2                                                           --------->ARR11(3)                                              <---------HSFB2a(2)                           --------->YAB1     --------->HSFB2a(2)                                 --- ----->REM1(2)            <---------YAB1<---------TOE2(3)  <---------ARR11(3)                -------- ------ZAT14   <---------ANAC58        ---------->DOF2  *TSS ------>ZmHOX2a(2)             --------->AHL20(2) ---->ALFIN1   <---------ANAC58  <----------DOF2     --------->ARR11(3)          <-----------GT1 <XXX ---ANAC46     <---------ANAC46  <---------DAG2  ---------->DOF2     <----------DOF2   --------->LBD16   gtagggttttccatcttccttggataacatcataacttttttaaagttccataaagacattgatcttttgacttttgagtttttgaccccagaaaaaata  583000                                       --------->ANAC58                                 --------->TOE1(3)                                 --------->TOE2(3)    <------------CBF                              <---------CCA1(2)      --------->ATHB12                          <---------ANAC46     <---------MYB52(1)                          ----------                          <---------ANAC58    <-----------HVH21                            ==========                       <---------WOX13(1)  ------>NtERF2                                 --------->YAB1                      <------------CBF --------->ANAC46                                  --------->AHL20(2) <---------AHL20(2) <---------YAB1     --------->ANAC58                <------------CBF  <---------AHL20(2) -------->GT1<---------AHL20(2)--------->ARR11(3) --------->REM1(1)----------->HVH21 --------->AHL20(2) ->AHL20(2)  --------->AHL20(2)<---------ARR11(3) <-----------------AGL1             <---------AHL20(2) XXXXXXXXXXXXXXXXXMIR841B*<---------ANAC58<---------ALFIN1    <------NtERF2         --------->AHL20(2)   tagtttattagaaatttaaattctaattgcttaaatcttaaacgacaccgttacaccattgggcctcaaatgacattgactcttcatttaataaaaagcc  583100                               <---------ICU4                <-----------HVH21                <-----------TGA1               ========================================bZIP_DOF               --------->bZIP60(2)               --------->TGA1a --------->ATHB51        --------->TOE2(3)    <---------YAB1            --------->ICU4         --------->GLK1(2)   <---------AHL20(2)         <---------YAB1         <-----------ARR10---------->DOF2   --------->AHL20(2)  <-----------TGA1     ---------->DOF2        --------->ANAC58  --------->AHL20(2)*TSS      <---------MYB52(1)     <---------ARR11(3) >DOF2         --------->O2<---------YAB1--------->TOE2(3)         --------->ANAC58 ========================bZIP_DOF      <<<<<<<<<NAM  --------->ARR11(3)                 --------->AtLEC2   caaattaaaattcagactcgtcagtcgtcaccattatttcatcccttaaaccaaaaatcttagtttcagacggaaagagagagtatagccatggaagtct  583200                                                         <-----------ARR10                                                       <---------SPL7                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58                                                   <---------DEAR3(1)                                                  <------NtERF2                                                  --------->SPL7                                                  --------->ATERF1(1)                                                --------->DEAR3(1)                                                ------->GAMYB                                                ----------->HVH21                                               --------->ATERF1(1)                                               --------->DEAR3(2)                                               --------->MYB46(3)                                              --------->ZAT2                                              ------>NtERF2                                          --------->ANAC58                                  --------->ARR14(2) <------NtERF2               <----------DOF2                                  <---------ARR14(2)------>NtERF2               ------>ZmHOX2a(2)                                ----------->HVH21--------->MYB52(1)            <------ZmHOX2a(2)                               --------->DEAR3(1)<---------ATERF1(1)          --------->ARR11(3)                             ------>NtERF2--------->ANAC58                    <---------ARR14(2)                            --------->DEAR3(1)<---------At4g35610             <---------ARR11(3)                            --------->ANAC46  --------->At4g35610             <---------AGP1                            <---------DEAR3(1)<---------ATERF1(1)             --------->ARR14(2)                   --------->ANAC58     <---------ANAC58 --------->ARR14(2)  <---------CCA1(2)                   --------->ANAC58     <---------ANAC58 <---------ARR14(2) ----------->ARR10                 ---------->DOF2--------->LBD16--------->RAP2.3(1)       <---------REM1(1)              --------->ANAC58<---------LBD16 <---------ZAT2             <---------ANAC46              --------->ANAC58--------->ATERF1(1)------>NtERF2      <---------At4g35610            --------->MYB52(1)<------NtERF2  --------->DEAR3(1)   <-----------RAV1(2)       ---------   caaatcagaccagaaaacggaaagcaatcgacgccggacatggctcgcagccgacggcgtatcgaggctcagatggtgtagatctttctctccttgaagc  583300                                                                              <------NtERF2                                                                             ------>NtERF2                                                                            <---------ANAC46                                                                            --------->DEAR3(1)                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                           --------->RAP2.3(1)                                                                           --------->ATERF1(1)                                             --------->TOE2(3)             <------NtERF2                                     =====================================HOX2a_HOX2a                                     ================================HOX2a_HOX2a                                   --------->ARR11(3)      ---------->ID1 <---------RAP2.3(1)                                <----------DOF2    ---------->DOF2 ------>ZmHOX2a(1)                         ---------->DOF2     --------->TOE1(3)------>ZmHOX2a(1)         ----------->RAV1(1)                     <---------ANAC46------>ZmHOX2a(2) <---------ANAC58   <---------ATERF1(1) <------ ->DOF2         --------->MYB52(1) <---------ARR11(3)  <---------ANAC58  <---------DEAR3(1)   <------   acttgagaagtcttcgcataatggagtagaagcgcttgatcttaaaaccctaaaaaagcttgtcctctccttcgagcggcgtcttagagacaacatagct  583400                                                             <---------ARR14(2)                     <                                   --------->WRKY12          <---------ARR11(3)                     <                                   ----------->HVH21         --------->ARR14(2)                  <---                                   --------->WRKY38(1)       --------->ARR11(3)                  ----                                 --------->At4g35610         <---------ARR14(3)               -------                                 <---------At4g35610         --------->ARR14(3)               <------                           --------->DAG2               --------->ANAC46                      -------                          ---------->DOF2            ------>MYB46(1)                         <-------                       --------->LBD16               -------->P                           <---------GLK1(1)                      --------->HSFB2a(2)            ------>MYB83                         --------->GLK1(1)                      <---------HSFB2a(2)       <---------WRKY18(1)    --------->At4g35610<---------At4g35610                   <---------ARR14(2)          --------->WRKY12------>ZmHOX2a(2)          --------->At4g35610                   --------->ARR14(2)       <---------MYB46(3)<------ZmHOX2a(2)--------->ALFIN1------ ---At4g35610      --------->GLK1(2)------>NtERF2  <---------MYB59   <---------GLK1(2)    --------->ZAT2 ---ZAT2     --------->ALFIN1  --------->ZAT18 --------->WRKY38(1)  <---------At4g35610   <---------ZAT2   gctcgtctcaagtatgtggagaatccagaaaagttcgctgactcagaggttgacctacacgacgatcttcagaagctcaaggtgctcgctggagctccgg  583500         ------->TEIL         --------->ARR14(2)       --------->LBD16      --------->ANAC46     <---------LBD16 ---------DAG2 ----------DOF2 ------ARR14(2) ----->ARR14(2)                  --------->TOE1(2) -->HSFB2a(2)                 <---------ARR14(2) ---HSFB2a(2)     <---------ANAC46                                                          <-------- -->ANAC46        <---------ANAC58                      --------->YAB1                     --------->At4g35610 --LBD16 <---------ARR14(2)   --------->ARR14(2)   ------>ZmHOX2a(1)         ------>NtERF2 <---------At4g35610 --->LBD16        <---------ANAC58          --------->WOX13(1)              --------->DEAR3(1)   aactttacccggaccttgttgcttccaatacggttccttcgattgtcaatctcctctctcatgaaaactccgatatcgccaacgatgttgttcagcttct  583600  Previous    Next  AGI:  At3g02700.1    Description:  NC domain-containing protein. similar to NC domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G16330.1); similar to unknown [Populus trichocarpa] (GB:ABK92854.1); contains InterPro domain NC (InterPro:IPR007053) Range:  from: 581548    to: 582956    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g02710.1    Description:  nuclear associated protein-related / NAP-related. similar to unknown [Picea sitchensis] (GB:ABK24423.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22227.1); contains InterPro domain Protein of unknown function DUF1716, eukaryotic (InterPro:IPR013180); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225) Range:  from: 583120    to: 585955    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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