Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ANAC58                                                                                   ------->TEIL                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                                --------->ANAC55(2)                                                                                <---------ANAC58                                                                                <---------ANAC55(2)                                                                               <-------TEIL                                                                               <---------TOE1(2)                                                                               --------->SPL7                                                                               ------->TEIL                                                                             <---------SPL7                    --------->ZAT14                                         <---------ANAC46                --------->ZAT6                                              <---------ANAC58           ----------->GT1                                                  <---------ANAC58          --------->ANAC58                                                 <---------------AtSPL3          --------->ANAC58                                           <---------GLK1(1)          --------->ANAC46                                           --------->GLK1(1)        <---------ALFIN1                                            --------->ARR11(3)       <---------REM1(2)                                            <---------ARR11(3)           ----     --------->ANAC46                          ----------->GT1      --------->ARR14(2)           ---- ------>ZmHOX2a(2)  <---------ZAT14       <------ZmHOX2a(2)         <---------GLK1(2)<---------ANAC58 ---------GLK1(1) --------------->AtSPL8  --------->ZAT14           <---------ARR14(2)       <------- -----ATHB12--------->At5g28300         --------->At4g35610    --------->GLK1(2)<---------ANAC58 <---   cgatctccctccacggtaacactgtacaattcttctatcaacagatcactcgtgaaaaaaacgagaatcagatattcggcgtacgtaccttggcaacgaa  576000                                           --------->MYB52(2)    <---------YAB1                                       --------->MYB52(2)     <---------YAB1                                       <---------MYB46(3)   <---------MYB46(3)                                     <---------ANAC46     <---------ANAC58       --------->GLK1(2)        <------MYB46(1)           <-------GAMYB --------------->AGL15       --------->ARR14(2)       <------MYB83              <---------ANAC58      <---------ARR14(2)       --------->MYB46(2)     <---------ANAC58  --------->TOE1(3)      <---------GLK1(2)        --------->MYB111(1)    <---------bZIP60(2)------>ZmHOX2a(1)      --------->ARR14(2)  --------->AHL20(2)          <---------ANAC58  --------->TOE2(3) ----->HSFC1(2)           --------->AHL20(1)       ----------->HVH21    <---------------AGL15 ----->HSFB2a(1)          <---------AHL20(2) --------->ALFIN1<-------GAMYB --MYB52(2) <---------AtLEC2   --------->MYB59  <---------ANAC46 --------->ICU4             <------ZmHOX2a(1) ------HSFC1(2)   ------>ZmHOX2a(2)<---------MYB46(3) <---------ANAC46 ----------------->AGL3 <------   gggtctcagattctgcatgatccaagaattaattaggtggtttgttagtgggggtgacttggttgttattatttccttaaaaagttttatacaaggacag  576100           <---------AHL20(1)           --------->AHL20(2)                                                                     ---           <---------AHL20(2)                              --------->YAB1              <----------DOF2    <------NtERF2                                       <----------DOF2            <---------CCA1(2) -----RAV1(2)           <----------DOF2       --------------->AtSPL8         <---------ICU4 ---------   atgggcctcatattttatttatgggccttttaacttgggctagacatccttgtacttcctttcataacaaattcccaaattatgtctatctttctcataa  576200                                                    ------>ZmHOX2a(2)                                                  --------->ARR11(3)                                                  <---------ARR11(3)                                               <--------P                                              <-------GAMYB                                           <---------LBD16                                        <---------HSFB2a(1)                                        <---------GLK1(1)                                       <-----------ARR10                               <---------PCF2 <---------MYB52(1)                             <---------ZAT18 --------->LBD16                    <-----------GT1   ---                  ----------->GT1      --------->GLK1(2)                   <------MYB83         ----- ------->DOF2  --------->MYB52(1)      --------->ARR14(2)                  <------MYB46(1)     ------ >YAB1     ------>NtERF2<---------YAB1<---------GLK1(2)                   --------->MYB59      ------   caaagaccataggggcctaatggtttattagtgggcctaagaatctccggttgatcttaaaaaacccgatataagttcggttttactaaaccggtctcct  576300                                                                           --------->ANAC58        --------->ZAT14                                                    --------->ANAC58      --------->At5g28300                                        <---------ANAC58 ------->DOF2                                                    <---------ANAC46 ->ZmHOX2a(1)                                    <----------DOF2 <---------ANAC58 --->TOE2(3)                    ---------->DOF2 <---------DAG2--------->GLK1(1) --->TOE1(3)       ---------->DOF2      --------->YAB1        <---------GLK1(1)                 <----   taaaacacagtaaacaaacaccaaagtctctgaagaaagaaatcaaaacccctttcgaacaaggatttcttggagcgaagcaaaatggtttggggtctct  576400                                                                                               ------                                                                                               ------                                                                                              <------                                                                                         --------->YAB1                <---------TOE1(3)                                                        <---------ICU4          ------>ZmHOX2a(1)                                                              --------->ATHB12        ------>ZmHOX2a(2)                                                                <--------HAHB4    --------->WRKY38(1)                                                                 --------->ICU4    --------->WRKY12                                 --------->ZAT18     <---------ZAT6 <---------YAB1   <---------MYB52(1) <-----------GT1         --------->AtLEC2        <-----------GT1 --------->YAB1  <-------GAMYB <---------TOE2(3)           <---------ANAC58         <---------ZAT14<-----------GT1 ------DOF2 <----------DOF2                 <---------ANAC58 <----------DOF2     <---------AHL20(2)   ttcccgttgatcctctttcaggtttttctccattagaattcgattgtcttgcaagtgaacgagctttattgtttactgttcatttttttcatcattacga  576500    <-----------GT1 <---------ICU4                                                  <---------ANAC58 --------->AHL20(2)                                              <---------ANAC58 <---------AHL20(2)                                             <-------TEIL --->TOE2(3)                                            ----------->GT1      <---------MYB52(1) --->YAB1     <---------ICU4                       <------ZmHOX2a(1)        <----------DOF2 ---YAB1------>ZmHOX2a(1)     --------->TOE2(3) <---------HSFB2a(2)   ----------->HVH21            --   taattttttcctccagtaattgcagttctcaatctcaactatgttatgctctaggaatcagtgaaattcgtgatgaccctttagtttttagttgttctct  576600                                                                                               ------                                                                                              <------                                                                                            <--------                                                                                      <---------DAG2                                                                                      <----------DOF2                                                                                     <---------ANAC58                                                                                 ------>ZmHOX2a(2)                                        ----------->RAV1(1)         ====================HOX2a_HOX2a                                        <---------ALFIN1            <------ZmHOX2a(1)<---------ANAC58    <-----------GT1       ----------->GT1                   <---------YAB1     <---------ARR11(3) ------->ICU4       <---------YAB1   --------->ANAC46<---------TOE1(2)         --------->ARR11(3)   acttattaacaacttcggtctgatcaatgtgttacaaaaaccccacatttcttcttgggtttatgctagaggagtgagtttgatcttgctttttaagaat  576700                                                                                               ------                                                                                             --------                                                                                      <---------MYB46(3)                                                                                      <------MYB83                                                                                     --------->MYB111(1)                                                                                     <---------MYB46(3)                                                           --------->ARR11(3)        <---------AtMYB61                                                           <---------ARR11(3)        --------->MYB59-                      <---------MYB46(3)      ----------->GT1          ----------->GT1<------MYB46(1) --->GLK1(2)          ----------->GT1    --------->At4g35610       ---------->DOF2   --------->MYB111(2) ---GLK1(2) --------->TOE1(3)            <---------At4g35610  <----------DOF2       <--------P------- -TOE2(3)   --------->TOE2(3)          <-----------RAV1(2)<---------CCA1(2)  <-----------GT1---------   ctctagttttgtaaccttgatgagttgttaaatggtttgaatcaggtgaagataaatactatatcttttcaaagggtatttacaaggttggtcgaaaagg  576800                                                                                          <------ZmHOX2a(1)                                                                                          --------->YAB1                                                                                          ===========                                                                                  <---------YAB1                                                                                <---------ICU4                                                                                --------->YAB1                                                                               --------->ICU4                                                   <---------MYB46(3)          <---------YAB1      <-----------GT1                             <--------P                 --------->YAB1         - ----->GT1                 <---------ANAC58      <---------ANAC58           <---------YAB1=========== ->DAG2          <---------ICU4           <---------RAP2.6(3)               <---------AHL20(2)    --- ---------->GT1 <---------YAB1      <---------ANAC58                 ----------->GT1    <---------TOE2(3) -->DAG2      --------->YAB1        <---------ANAC58    <----------DOF2     --------->AHL20(2)------- ->DOF2    <----------DOF2 <---------ANAC58      <---------ANAC58  <------ZmHOX2a(1)   --------->YAB1   taatgttattacactttcatcatcgtcttgctcgtgttctgtgccttcatgggttgttctttctctgtaggatgtgatataattatcaataaggataagg  576900  Previous    Next  AGI:  At3g02680.1    Description:  NBS1 (NIJMEGEN BREAKAGE SYNDROME 1). similar to unnamed protein product [Vitis vinifera] (GB:CAO22154.1); contains InterPro domain Forkhead-associated (InterPro:IPR000253); contains InterPro domain SMAD/FHA (InterPro:IPR008984) Range:  from: 576385    to: 579566    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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