Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------CCA1(2)                                                               --------->ANAC58                                                               ------>ZmHOX2a(2)                                                               --------->ANAC58     --------->YAB1                                 ---------->DOF2  ------->GAMYB --------->ICU4                            --------->TOE2(3)  <------ZmHOX2a(2) ---->ANAC58                               --------------->AGL15   -------->P ---->ANAC46    --------->ATHB12     --------------->AtSPL8 <---------GLK1(1) ---->ANAC58  XXXXXXXXXXXXXXXXXXXX>MIR860------->TEIL       --------->GLK1(1)                       -   gaaatgatcaaaatcaattcattgaactatgtatagatgtttgtaccttgaacagaaaggggagatcgcaaccccatttctccaaaaccctatttccaag  545200                                   --------->ANAC55(2)                                   --------->bZIP60(1)                                   --------->ANAC58                                   --------->bZIP60(2)                                   <---------bZIP60(1)                               <-----------HVH21                           --------->MYB52(1)                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)      --------->WOX13(1)                       <---------ARR11(3)     ------>ZmHOX2a(2)                       --------->ARR11(3)     <-------TEIL                       <---------ARR14(2)     ===================HOX2a_HOX2a                       <-----------ARR10     ====================HOX2a_HOX2a                       <---------AGP1        <------ZmHOX2a(2)--------->ANAC58                       --------->ARR14(2)   <---------ARR14(2)--------->ANAC46                      <------ZmHOX2a(1)     --------->ARR14(2)--------->ANAC58                    --------->LBD16<---------ANAC55(2)    ------>ZmHOX2a(1)                   <---------LBD16 --------->ANAC46   --------->ARR14(2)        <---------O2    <---------TOE1(3) ===============================HOX2a_HOX2a                --------->O2    <---------TOE2(3) ==============================HOX2a_HOX2a                 --------->TGA1a   --- -------->CCA1(2) ------>ZmHOX2a(2)--------->ANAC58 --------->At4g35610         <---------TGA1a   <--   agatttagggttttcggtgatccaggatctaagggtcacgccattggatccatcagcatcctccaagtaactcggaccagactcgtgagtccccatccat  545300                                             --------->LBD16                                             <------NtERF2                                             ------>NtERF2                                            --------->RAP2.6(2)                                           <---------LBD16            <---------ANAC46          --------->ARR14(2)        --------->DAG2           --------->At4g35610                      ===========================       --------->SPL7            <---------At4g35610                      <------ZmHOX2a(2)        --     <---------SPL7       ------>ZmHOX2a(2)--------->RAP2.3(1)           --------->ARR14(2)       ---    <---------ANAC46  ------>ZmHOX2a(2)  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                       ---   <------NtERF2   ==============HOX2a_HOX2a--------->DEAR3(1)           <---------ARR14(2)     ----- <---------DEAR3(1)<------ZmHOX2a(1)  <---------ARR14(2)            <---------ARR14(2)     --------->YAB1 ------>ZAT2<---------ANAC58--------->ANAC55(2)                     --------->ARR14(2)    <---------ATHB12 -------ZAT2<---------ANAC58<---------ANAC55(2)                ----------->GT1         <---------ALFIN1   agctcggcgtaaggtcgtgtaggatcgatctcgtaatctgaattcgccgcataaaccctgtaaacgagtgaatccgatccaattttgccccaatcgtaat  545400                                                --------->DREB2C(2)                                                --------->ANAC58                                      --------->At4g35610                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  <---------ARR14(2)                                  --------->ARR14(2)       <----------DOF2                                 <---------DEAR3(2)  <---------MYB52(1)                               <------NtERF2    ------->GAMYB                            <------NtERF2       --------->ANAC58                            --------->ATERF1(1) --------->ANAC46 --------->MYB52(1)        <-----------HVH21    --------->DEAR3(1) =====HOX2a_HOX2a          <---------RAP2.6(3)  --------->RAP2.6(2) ---->ZmHOX2a(1)          --------->DEAR3(1)   <---------MYB55(2)           ------>ZmHOX2a(2) ------>TOE1(3)       --------->ATERF1(1)      <------------AtMYB77        --------->GLK1(1) ------>TOE2(3)      <---------ATERF1(1)    --------->MYB46(3) --------->ANAC46       --------->ANAC46 ---->ICU4--------->At4g35610<---------DEAR3(1)--------->MYB46(3)          <------ZmHOX2a(2)      <--   ccttaacagagcatctcaatcggcgaagccgtcgtcgatccgcttcacaaccgccattagcctttacgacagtagcgatctccattacaccaaaaaactc  545500                                                      --------->At4g35610                      <---------LBD16                --------->ANAC58                      --------->HSFB2a(2)            --------->ANAC58             <---------ARR14(2)          --------->ARR11(3)       --------->GLK1(2)   ----------->GT1       --------->YAB1       ------->TEIL   <---------HSFB2a(2)<---------ARR11(3)  <---------ZAT18                    <----    <---------ANAC55(2)   <---------TOE2(2)    --------->ANAC58                               <------    --------->ANAC55(2)   <---------TOE1(2)    --------->ANAC58    <-----------HVH21       <---------    <---------YAB1<---------MYB52(1)    --------->CCA1(1)    --------->ZAT18           <----------DOF2 -------YAB1 --------->ARR14(2)         --------->RVE1(1)---------->CDC5          ---------->DOF2   <   acgattacgaatctaaatccgtttctcggaggtaaaaacaaaatatctcaagcataagctaagcgcccatgtcaatggaagactcaaagcttttctcttt  545600     <---------ARR14(2)     --------->ARR14(2)                         ----------->GT1    <---------GLK1(2)                         >>>>>>>>>ARR2  --------->LBD16                             <------------CBF                                <------  *TSS                                        >>>>>>>>>ARR1                               --------->AHL20(2) --------->LBD16                             --------->ATHB12                             <---------YAB1 -------GT1                                 <---------YAB1                          --------->AHL20(2) ----DOF2                               <------MYB46(1)         --------->ALFIN1    <---------AHL20(2) --GT1 <---------ANAC46                 <------MYB83      ---------->DOF2---------->DOF2  <---------AHL20(2) ---------LBD16<---------AHL20(2)    <------ZmHOX2a(1)  --------->YAB1 <XXXXXXXXXXXXXXXXXXXXMIR773B <   acccccgaatcgtggatttttttatgttttataaacagaggaaggtatgattgtaaaatcaaaagtatgggggtcaaaagttggaataaaatataaatgt  545700                                                                                             <-------                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                 ------>NtERF2           ============                                                                --------->DEAR3(1)       <---------ANAC58                                                                ----------->HVH21       --------->MYB55(2)                                                       ------->MYC3                     <------MYB46(1)                                                       ------->MYC2                     --------->MYB52(2)                                                       <-------MYC2                     <------MYB83                                                       <-------MYC3                     <---------MYB46(3)                                                      <---------TGA1a                  <---------AtMYB61                                                      --------->ANAC55(2)             <---------MYB52(1)                                                      --------->TGA1a                <-------GAMYB                                                      <---------ANAC58               ================                                                      <---------ANAC55(2)           --------->MYB52(2)                                                      <---------ANAC46              <---------MYB46(3)                                                      <---------O2                <---------MYB52(1)                                                      <---------ANAC55(1)        <---------SPL7------                                                      <---------ANAC58          <---------DEAR3(2)                                ----------->HVH21     =======================================MYC_MYB                             --------->DAG2           =======================================MYC_MYB                            ---------->DOF2           --------->O2  ----------->GT1--------->SPL7       --------->ICU4       ====================================bZIP_DOF       <-------TEIL<---------MYB46(3) <--------P              --------->ZAT18         <---------GLK1(1)<------NtERF2--------->SPL7<------- ---REM1(1)         ---------->DOF2  <---------At4g35610       --------->DEAR3(2)<-----------HVH21  < -------GAMYB       ============================================bZIP_DOF  <-----------GT1<-------GAMYB   agggttgcgatgtttaacttaagaaagtgcaaaagtgacagatgttcaaagaaatcacgtgttttgccgacggtattaacgtccgtccgttggttgtggg  545800                  --------->ZAT18                  <---------ZAT18                ------->MYC3                ------->MYC2                <-------MYC2                <-------MYC3                <-------PIF5                ------->MYC4                ------->PIF5                <-------MYC4                          --------->AHL20(2)               --------->TGA1a                        <---------AHL20(2)               <---------TGA1a                       <---------AHL20(1)               ===========================================bZIP_DOF               <---------PIF3(3)                     <---------AHL20(2)               <---------O2   <---------YAB1         --------->AHL20(2)               --------->PIF3(3)                  --------->AHL20(2)       <---------At4g35610  -------->HAHB4       <---------AHL20(2)       --------->At4g35610  <---------ICU4       --------->AHL20(2)       --------->ZAT2       --------->YAB1     <----------DOF2       <---------ZAT2      --------->ICU4  <---------ANAC55(2)    <---------ANAC58      <---------TOE2(3)--------->O2<---------AHL20(2)    <---------ANAC58     --------->YAB1    --------->ANAC55(2) --ANAC58  ----------------->PIF3(1)       --------->ANAC58 ========================MYC_MYB           ===============bZIP_DOF                        ------->TEIL ========================MYC_MYB           --------->TGA1a                      ----------->RAV1(1) ----->TCP11(1)--------->O2<---------ATHB12--------->ANAC58                    <----------ID1     --- --ANAC58  <----------------PIF3(2)        <---------O2--------->AHL20(1)     --------->DEAR3(2)----- ---------MYB52(1)--------->WRKY38(1)      <---------TGA1a         <---------ZAT6     ---------------   ccgtttgctagctgtccacgtggactctaatgatgactcactctcacgtctttaaattattttgtactagtgtaaactaaaccgacaaaatgtaccaata  545900                               <---------ICU4                  <---------ARR11(3)                              <---------YAB1                 <---------ARR11(3)                            --------->TOE2(3)                --------->AHL20(1)                            --------->YAB1                   --------->ARR11(3)                           <---------YAB1                    <---------AHL20(1)                          <---------------------WRI1        --------->AHL20(2)                         <-----------GT1                <---------ATHB12                    <--------                     <---------AHL20(1)                 --------->AHL20(2)    ----------->GT1<------- ------>AHL20(2)     --------->AHL20(1)             <---------YAB1  <---------TOE2(3)   <---------YAB1 ---->AHL20(2)       --------->AHL20(2)        <----------DOF2<---------CCA1(2)--------->YAB1-------- >AtSPL8             <---------AHL20(2)   <-----------GT1--------->YAB1       --------->ICU4---------   taaaatgttctaaacgttctcattttattacgataattccaaattcactcttttatcaataaatatatctaatgtaagaaatgataaactataatttaaa  546000                                                             <---------ETT(1)                                                             ------->GAMYB       --------->ARR11(3)                                    ----------->HVH21       <---------ARR11(3)                          <-----------HVH21       --------->GLK1(2)                           <-----------TGA1 ----------->GT1                                  --------->ANAC58 -AHL20(2)               --------->ARR11(3)       --------->ANAC46                 --------->MYB52(1) --AHL20(2)              <---------ARR11(3)       --------->ANAC58       --------->At5g28300 ->AHL20(2)           <---------ATHB12          <---------DOF5.7(2)     ----------->GT1 <---------GLK1(2) >AHL20(2)            --------->AHL20(2) <---------ZAT6      --------->ANAC46 --------->AHL20(2)   aacatgaaaaatctattcagaccaataaatcttcatttttgtagtgttgtaaacgtcatacatccgacatcaaacagtaactaaataacagaattggaat  546100  Previous    Next  AGI:  At3g02570.1    Description:  MEE31 (maternal effect embryo arrest 31); mannose-6-phosphate isomerase. similar to DIN9 (DARK INDUCIBLE 9), mannose-6-phosphate isomerase [Arabidopsis thaliana] (TAIR:AT1G67070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60179.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Mannose-6-phosphate isomerase, type I; (InterPro:IPR001250); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051); contains InterPro domain Mannose-6-phosphate isomerase (InterPro:IPR016305) Range:  from: 543353    to: 545602    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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