Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->CCA1(2)               ------->TEIL         <---------ARR11(3)            <---------MYB52(2)    --------->ANAC58                                                  -        --------->AHL20(2)        --------->ANAC58                                 <----------DOF2  <        ---------->DOF2 <---------ARR11(3)             --------->MYB59            --------->TOE2(3)-- ------->At4g35610      --------->ARR11(3)--------->TOE2(3)            <-----------GT1             <-   tagatgacaataaaacgaacctctgagatattcgacaaggtatttcttaacttgagtaaggtctgaaacgatttaactactctacctttgattttgagaa  453000                                                                                     <-----------GT1                                                                         <----------DOF2           <---------YAB1                            --------->ANAC58 <---------RVE1(1)  <---------YAB1                                     --------->ANAC58--------->ARR14(2) -------->ATHB12                                   <---------ANAC58  <---------GLK1(2) ---------ICU4                                     <---------ANAC58  <---------ARR14(2) ------->ICU4          <----------ID1         <-----------RAV1(1)   <---------At4g35610         ----- --------YAB1    <---------AtMYB61           ------->TEIL   <----------DOF2   ---------->ID1<--------   gatgattacagttgtgattttggtggagacaaaaatgtccatctatgtatgttgctagccatcttttttcagatacttttgtcttattttcgagttacaa  453100                                                                                              -------                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                   <------ZmHOX2a(2)     <---------ZAT18                                                              --------->ARR11(3)   --------->ANAC46                                            <---------AtMYB61  -------------------   --------->ANAC58                                         <----------DOF2       <---------ARR11(3)   --------->ANAC58           <---------ANAC58          <---------ANAC46         <XXXXXXXXXXXXXXXXXXX ---->ANAC46                  <---------ANAC58     <---------MYB46(3)     <---------At4g35610 ------- ---GT1   --------->ZAT14     <---------AtLEC2  <-----------RAV1(1)      <---------TOE2(3)    -------   gttacaaggcactatgctctgtaactaattttgcatgtcttccacttattgtgttgttgtgtcttttggtggattaagctaagagatcaacaagacaaga  453200                                 ----------->GT1                               <---------ANAC58                               <---------ANAC58                            <---------WOX13(1)                           <---------ANAC58     ------>MYB83     <---------ANAC58     ------>MYB46(1)  <---------ANAC55(1)    ----------->RAV1(1)    <---------ANAC58               <------MYB83<---------AHL20(2)  --------->MYB46(3)  <---------O2          --------->At5g28300   ----------->GT1 -->ANAC58            <---------ANAC58      <-------GAMYB <---------MYB46(3) ----->ANAC81         <---------ANAC46  ------------>MYB.PH3(1)   <---------MYB46(3) XMIR863-5P           <---------ANAC55(2)  ----------->GT1<------MYB46(1) ---->GT1            <-------TEIL<---------MYB46(3)   <-----------RAV1(1) -->ANAC58       <---------YAB1<---------ANAC46      --------->ARR11(3)                <----------DOF2   aaaaaccaacatttctgttctgatacgtggattgctggttaaatacggttatatagatgttggtttagtggtttaattcgtattgtatactttacaagtt  453300                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                     <---------TOE2(3)                                                     <---------ANAC55(2)                <-----------GT1                                                   --------->AHL20(2)             --------->TOE2(3)                               ------>MYB46(1)<---------------AGL15       ---------->DOF2          <- --------------------->WRI1    ------>MYB83   --------------->AGL15    --------->At5g28300  ------>ZmHOX2a(1) <----------DOF2             --------->TOE1(2)------------>CBF  --------->GLK1(2) --------->YAB1   --   tgactttgtatttttcaaaaaaaaaaaaaaacctagcagtctgttcttctcaattaagtatgggcgaatccacagtgaaagtaatcttattctccttatg  453400                      <---------ANAC46                      ----------->GT1                                                            <---             --------->ANAC58                                                                    ----             --------->ANAC58 --------->At4g35610                                         <---------ANAC58           --------->ANAC46   <---------At4g35610                                <------ZmHOX2a(2)         --------->ANAC58   *TSS                                  <<<<<<<<<<<<<<<<<LFY    <---------ANAC58         --------->ANAC58  ---------->DOF2                       --------->ZAT14<---------ARR11(3)<-- --------GLK1(1)    --------->ZAT14                   >>>>>>>>>TBF1     <---------MYB46(3)<---------ANAC46 ------->GLK1(1)    <---------ZAT14                >>>>>>>>>TBF1 <---------ZAT14--------->ARR11(3)---   gatttcttcttacgcacgactgtgaagtagaaagctcaccatctctcttagaagaagaagaacacactgtacattggttcaagatcaatttggcttggca  453500                                                                                                  ---                                                   <---------AHL20(2)                          ------                                                   --------->AHL20(2)                         <------            <---------HSFB2a(2)                   --------->AHL20(2)                  --------->YAB1-            <---------------AtSPL8           --------->HSFB2a(2)       <---------ANAC58   -----------            --------->HSFB2a(2)          --------->GLK1(1)           <-----------GT1 <---------ATHB12 ------At4g35610                        --------->ARR11(3)    <---------YAB1     <---------AHL20(2) < ----->At4g35610                        <---------ARR11(3) <---------ARR14(2)    --------->AHL20(2)<- -------ARR14(2)          <------MYB46(1)<---------GLK1(1) --------->ARR14(2)   --------->AHL20(2)<-- ------>ARR14(2)          <------MYB83<---------TOE2(3) --------->MYB59<---------ANAC58 --------->At4g35610   gatgccctgttgttctggtacaaacatttggttctccactaagatttctcgatttaattcggttctgattttaacttgccaatttaaatcatcagaccgg  453600                                              --------->ATERF1(1)                                              <------NtERF2                                             <---------ERF1                                             <---------ORA47(2)                                             <---------RAP2.3(1)                                            --------->ATERF1(2)                                            <---------ATERF1(2)                                            <---------RRTF1(3)                                            <---------DEAR3(1)                                            <---------RAP2.6(2)            <---------ARR14(2)              <---------DREB2C(2)            --------->ARR14(2)              <---------RAP2.3(3)        <---------ZAT14                     <---------RAP2.3(2)        --------->ZAT14                     <---------RRTF1(2)        <---------ZAT18                     <---------ANAC46     <---------MYB46(3)                    <---------ABI4(1)                    <---------ANAC46   <---------MYB52(1)                      --------->ATERF1(1)           <---------ANAC46   <-------GAMYB                     <------NtERF2                       <---------ANAC58  --------->LBD16                <------MYB46(1)                         <---------ANAC58 ------>ARR14(2)                 <------MYB83------>NtERF2           --------->At4g35610 --->LBD16  <---------MYB52(1)  <---------DEAR3(1)                   <---------ZAT2 ---LBD16 ----------->GT1       --------->MYB55(2)                   <---------At4g35610 ----->ZmHOX2a(2)               <---------AtMYB61                    --------->HSFC1(2) >HVH21 --------->ZAT18         --------->ALFIN1                     <---------HSFB2a(1) ---------LBD16<---------YAB1<---------MYB46(3)<---------DEAR3(1)    --------->HSFB2a(1)           -- -----ZmHOX2a(2)         <---------SPL7  --------->ALFIN1     ---------->DOF2<-----------RAV1(1)   <- -------ARR14(2)  <----------DOF2<---------MYB46(3) ----------->GT1  <---------HSFC1(2)          ----   gatccggttgtgcagttattctttattcggacgggtggtggcagtggcggcgatgggagaaaaacaaaggaagctgcttgtgttgtatgcctctcagacc  453700                        <---------ARR14(2)                        --------->ARR14(2)                     <---------ANAC58                <---------ANAC46                --------->ALFIN1                <---------DEAR3(1)               --------->ATERF1(1)               <---------LBD16                           <---------ZAT2   --------->At1g77200               <---------At4g35610                       --------->ZAT2   ------->GAMYB --------->ANAC46               <------NtERF2                             <---------At4g35610            --------->ANAC58               ------>NtERF2                    --------->WRKY38(1)       --------->DREB2C(2)              <---------RAP2.3(1)               --------->WRKY12          --------->DEAR3(1)             <---------RRTF1(2)------>NtERF2    <---------ZAT14           ----------->HVH21             <---------RAP2.3(2)    --------->At4g35610  --------->At4g35610    <---------ARR14(2)             <---------RAP2.6(2) ---------->DOF2--------->ZAT14          --------->DEAR3(2)         -             <---------DEAR3(1)--------->LBD16--------->LBD16            --------->MYB46(3)       <--  --------->ANAC58   <---------ANAC58        --------->DEAR3(1)  <---------ANAC58       --------->ANAC55(1)  --------->ANAC58   <---------ANAC46     --------->ANAC58       <---------ANAC58     <---------ALFIN1 ------->ARR14(2) <------NtERF2<------NtERF2 <---------ANAC46 <-----------RAV1(1)    <---------REM1(2) --------ARR14(2) --------->ATERF1(1)     --------->ANAC58<---------GLK1(2)     --------->ARR14(2)--- ----->LBD16<---------LBD16   --------->RAP2.6(2)       ------>NtERF2  <---------ALFIN1 --------->ANAC58   ggaaacgctcttgatgcggcggagcgtattggccgcgaagcagaacgccgtggactgccagcttctgtcgtctccaccgacgaattcgacacggtatgtg  453800                                                                                 <---------AHL20(1)                                        <---------HSFB2a(2)              <---------WOX13(1)                                 --------------->AGL15                 --------->ATHB12                                 <----------DOF2                       <---------ICU4      --------->ANAC58 ---------->GT1              <---------MYB52(1)       <---------ANAC58--------->ICU4       --------->ANAC58 -------ZAT14              ----------->GT1            <---------ANAC58<---------YAB1   --------->HSFB2a(2) ------>ZAT14        ---------->DOF2    --------->HSFB2a(2)         --------->YAB1     <---------HSFB2a(2)   tgtagtaaaaccaatttgattttaaaagctcgttactttgttttggaagatggtttgcttcgtttttatatgatgattgctaatatgttttggaagcaaa  453900  Previous    Next  AGI:  At3g02280.1    Description:  flavodoxin family protein. similar to ATR1 (ARABIDOPSIS P450 REDUCTASE 1) [Arabidopsis thaliana] (TAIR:AT4G24520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49310.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96847.1); similar to Os01g0733600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044162.1); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain FAD-binding, type 1; (InterPro:IPR003097); contains InterPro domain Flavodoxin-like; (InterPro:IPR00109 Range:  from: 453428    to: 457848    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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