Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->DEAR3(1)   <-------GAMYB                   --------->ATERF1(1)  --------->MYB55(2)                <------NtERF2           --------->MYB111(1)               <---------ATERF1(1)      --------->MYB111(2)               <------MYB46(1)          <---------MYB46(3)              --------->ALFIN1         <--------P              <---------DEAR3(1)      <-------GAMYB            <-------GAMYB            <------MYB46(1)      --------->CCA1(2)              <---------MYB46(3)     <---------ARR14(2)            <---------ANAC58     --------->ARR14(2)       <---------At4g35610                                       ------>NtERF2  <---------ANAC46------>NtERF2--------->ATERF1(1)                                     ----------->HVH21 ---------WRKY18(1)<------NtERF2   <---------ANAC58              --------->WRKY38(1)   <---------ZAT18 -------->MYB52(1)<---------RAP2.3(1)<------MYB83           --------->ANAC58           --------->ZAT18 --------->HVH21--------->RAP2.3(1)<---------ANAC46         --------->ANAC58         --------->At4g35610 ------->WRKY12<------MYB83   --------->ZAT2           --------->YAB1                <---------At4g35610 ------ANAC58<--------P       --------->At4g35610     <---------ATHB12             <-----------GT1 ------ANAC58--------->ALFIN1 <---------ZAT2          --------->ICU4      <----------DOF2   cttgacggatatggggttggcgccatccatggagctggctggttgttggagttgcaattatcaagcattgactactctttgttttttagcggacacttgt  419700                                                               --------->ATHB12                                                               <---------ICU4                                                              <---------YAB1                                                             <---------ARR11(3)                                                             --------->ARR11(3)                                                            <---------ICU4                                                            --------->YAB1                                                            -------->HAHB4                                                  <---------ZAT6                                  <--                     <---------WOX13(1)     <---------ICU4 --------->ICU4                       -----                 <---------MYB52(1)        --------->ICU4  <---------YAB1                     -------               --------->LBD16           --------->YAB1  --------->YAB1               <---------ANAC58               ----------->GT1       --------->ZAT6     <---------YAB1                <------MYB83===              <---------ANAC46     <-----------GT1----------->GT1                     <------MYB46(1)             <---------LBD16  --------->ICU4<---------------AtSPL8                    <---------ANAC58   ttttatttctatagttccggttaattgatggaatttttaacagtaatgagtactgtttataatgatcattggcaagtagttgataatttggtgctatcat  419800                                 <---------DAG2                                 <----------DOF2                                <---------ANAC58                                <------------------------ANAC81                            <------------CBF                        <---------------AGL15                           <---------ICU4                           --------------->AGL15                          <---------YAB1                           <-----------------AGL2                         ------------>CBF                        <-----------GT1 -------------AGL15     --------->YAB1<-----------GT1<---------At5g28300 ---->At4g35610         <-----------GT1  <----------DOF2        --------->AHL20(2)--------->GLK1(2)<- -->YAB1         ----------->GT1<---------ANAC58    <-----------GT1<-----------------AGL3          -- ===================================================================================MADS_MADS      --   ctaaaaatagacagatagatggaaaataacaattgctttttgactttctgtttttcaccgtagcatttaactaattttggagagaatatttcatcagtga  419900                                         <---------ARR11(3)                                    --------->AHL20(1)                                    --------->AHL20(2)                                    <---------AHL20(1)                                   --------->YAB1                                <---------AHL20(2)                          <---------MYB52(1)<----------DOF2         <----------DOF2                         ----------->GT1 --------->ARR11(3)  <---------AHL20(2)                         --------->LBD16 <---------AHL20(1) <-----------TBP              <------------CBF --------->AHL20(2)           --------->AHL20(2)           <-----------HVH21<---------MYB46(3)          ------->GAMYB             <-----------GT1 --------AHL20(2)      <---------LBD16  --------->CCA1(1) ------>MYB83       <---------AHL20(2) ------->AHL20(2)   <---------GLK1(1)   --------->RVE1(1) ------>MYB46(1)    --------->AHL20(2) ------->ICU4--------->ATHB12  <---------AHL20(2)       <---------MYB59    <----------DOF2   --------   aaaaattagcactggtcattggacatccggtgattaaatataatatctttttcttcaaccaaatttatagcttttgactttaattttctatttctatata  420000                                                                                               ------                                                                                              <------                                                                                         <----------TaMYB80                                                                                         --------->HSFC1(2)                                                                                         <---------HSFC1(2)                                                                                         <------ZmHOX2a(2)                                                                          <---------ARR11(3)  -------                                                                      --------->AHL20(1) --------->HSFB2a(1)                                                                      <---------AHL20(1) <---------HSFB2a(1)                                                                ----------->GT1         <---------ARR11(3)                                                              ---------->DOF2           --------->ARR14(2)                                                           --------->TOE2(3)            --------->ARR11(3)                               --------->ARR11(3)          --------->TOE1(3)     <----------DOF2   --                               <---------ARR11(3)          ------->GAMYB <---------CCA1(2)------>ZmHOX2a(2)                    --------->AtMYB61                   --------->MYB52(1)--------->ARR11(3) <------- --->TBP        --------->MYB46(3)                   --------->YAB1  --------->AHL20(2) <---------ARR14(2)   tacacacacatactaacatccaccaaaacagatgatattcactcacatagaaatttcataaccgtaaagaaatatatatcttccttttgggatcttccgg  420100                                                            ---------->ID1                                                        <---------ANAC58                                                        <---------ANAC46                                                        <---------ANAC58  --------->AHL20(2)                               --------->ATHB12  <---------AHL20(2)                             <----------DOF2 --->LBD16                                       <---------DAG2                    ---------->ID1 ---HSFB2a(2)                                  <---------At4g35610            <----------DOF2 -->HSFB2a(2)                             --------->bZIP60(1)              <---------YAB1 --------->GT1            --------->CCA1(2)    --------->At4g35610      <---------YAB1<----------DOF2 --LBD16            --------->ALFIN1      <---------bZIP60(1)       --------->ANAC55(2)  --------->YAB1   aagattaattagagatgaagaagtggagttatgcgaagttaatgacctcagctttattgcttgtcttcttaagtattattcttttggcctttcatggttc  420200                                        <-----------GT1                                      <---------AHL20(2)                                     --------->YAB1                                    <---------YAB1                                  <---------ICU4                                  --------->YAB1                                 --------->ICU4                                 <---------YAB1                               <---------ICU4                               --------->YAB1                                                 <------                              <---------YAB1                                 --------->ARR11(3)                              --------->ICU4                     <-------TEIL<---------ARR11(3)     <                            <---------ICU4                   <---------MYB46(3)    --------->ARR14(2)                           <---------YAB1          ----------->HVH21     --------->CCA1(2)   <-------                           --------->ICU4<---------TOE2(3)  <---------WOX13(1) ------>ZmHOX2a(2)-----           <----------DOF2--------->TOE2(3)      --------->ANAC55(2)  <---------YAB1     ------->TEIL   gacctcttgttatcttttttttttaaaacattattattattataacgttttatgtgatagtgatggatgcatatgatatgatctatatatgcatttaggt  420300                                                            <----------ID1                                                        --------->ATHB12                                                   <---------ARR11(3)                                                   <---------ARR14(2)                                                   --------->ARR11(3)                                                  <---------GLK1(1)                                                  <---------RVE1(1)                                                  --------->GLK1(1)                                                 --------->ARR11(3)        ----------->HVH21                        <---------ARR11(3)      ----------->GT1    --------->ARR11(3)     <------ZmHOX2a(1)         <-----------GT1 ---ANAC46     --------->YAB1<---------O2     <---------TOE2(3)     ----------->GT1               <-- ------ZmHOX2a(2)       --------->YAB1        <---------TOE1(3)    --------->DAG2             ------- --TOE2(3)    <---------ATHB12               --------->MYB52(1)--------->ANAC58               ------- ---->ALFIN1--------->WOX13(1)             <---------MYB52(2)  --------->ANAC58           --------->MYB52(1)   ggatcaagaggtgacaatcatctatatgatcatgtggccatcggaactaaggatatcttgatgggacgaaaggtatatacaatttacacaaataacagct  420400                                                                                         <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)          --------->YAB1                                                             --------->ATHB12          --------->ATHB12 --------->ANAC55(2)                                      <---------YAB1          <---------ICU4   <---------ANAC55(2)   <---------ZAT18               <---------TGA2(1)     <----------DOF2     --------->AHL20(2)      --------->ZAT14               --------->TGA2(1)     <---------DAG2   <---------ICU4        --------->ZAT14                    --------->bZIP60(1) -------ANAC46   --------->ZAT14            <---------ZAT14               ------>ZmHOX2a(1) -->At4g35610    <---------ZAT14       <---------YAB1             <---------ZAT6    --------->ICU4 -->ZAT2 <---------YAB1  <-----------GT1 ---------->DOF2 --------->ARR14(2)    <---------bZIP60(1)   acgagtactttatgattacttcagtaattacatattttgttcttaatgcagtgcatccatatatacaagtgttatcctgtgatgtcatgatttattttca  420500                                                                                       --------->GLK1(2)                                                                                       --------->ARR11(3)                                                                                    --------->ANAC55(2)                                                                                    <---------ANAC55(2)                                                                                 <------ZmHOX2a(2)                                                             --------->MYB52(1) --------->ARR11(3)            --------->CCA1(2)                 --------->WOX13(1)                --------->AGP1           <---------ARR11(3)                 --------->KAN4(2)                <---------At4g35610           --------->ARR11(1)            --------->ICU4      <---------ARR14(2)--------->At4g35610  ----------->GT1               ----------->GT1       ---------->DOF2     <---------ARR14(2)       <-   cttgcagttaaaagatttgaaaccaaaaactgaatcgttgaaaatgatcaatcccaaaaagaagaacgggtttgagtattcagatcaagtatctagtgat  420600  Previous    Next  AGI:  At3g02242.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02240.1) Range:  from: 420115    to: 420687    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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